Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.1G098500 Prunus persica HOM05D007671 ORTHO05D009777 1.7e-47 192.2 89 100.0
Prupe.1G117400 Prunus persica HOM05D007671 ORTHO05D009777 1.4e-25 119.4 73 79.5
Prupe.1G113700 Prunus persica HOM05D007671 ORTHO05D009777 1.8e-25 119.0 62 90.3
Prupe.2G226800 Prunus persica HOM05D007671 ORTHO05D009777 1.2e-24 116.3 62 88.7
Prupe.8G172200 Prunus persica HOM05D007671 ORTHO05D009777 3.8e-23 111.3 61 83.6
Prupe.1G136000 Prunus persica HOM05D007671 ORTHO05D009777 1.1e-22 109.8 62 82.3
Prupe.1G384200 Prunus persica HOM05D007671 ORTHO05D009777 2.7e-21 105.1 60 83.3
Prupe.2G064500 Prunus persica HOM05D007671 ORTHO05D009777 8.0e-21 103.6 55 85.5
Potri.004G202466 Populus trichocarpa HOM05D007671 ORTHO05D009777 4.4e-19 97.8 58 79.3
Prupe.1G136200 Prunus persica HOM05D007671 ORTHO05D009777 1.3e-18 96.3 63 74.6
Potri.005G106800 Populus trichocarpa HOM05D007671 ORTHO05D009777 2.2e-18 95.5 61 75.4
Potri.005G107066 Populus trichocarpa HOM05D007671 ORTHO05D009777 2.2e-18 95.5 61 75.4
Gohir.A11G237966 Gossypium hirsutum HOM05D007671 ORTHO05D009777 2.8e-18 95.1 59 79.7
Potri.005G106933 Populus trichocarpa HOM05D007671 ORTHO05D009777 1.1e-17 93.2 58 75.9
Glyma.10G232100 Glycine max HOM05D007671 ORTHO05D009777 2.4e-17 92.0 56 76.8
Gohir.A11G238032 Gossypium hirsutum HOM05D007671 ORTHO05D009777 2.4e-17 92.0 59 78.0
Manes.11G047175 Manihot esculenta HOM05D007671 ORTHO05D009777 2.4e-17 92.0 59 76.3
Potri.005G106600 Populus trichocarpa HOM05D007671 ORTHO05D009777 3.1e-17 91.7 62 72.6
Gohir.D02G057375 Gossypium hirsutum HOM05D007671 ORTHO05D009777 1.2e-16 89.7 59 71.2
Gorai.005G063500 Gossypium raimondii HOM05D007671 ORTHO05D009777 1.6e-16 89.4 59 71.2
Gorai.005G063700 Gossypium raimondii HOM05D007671 ORTHO05D009777 1.6e-16 89.4 59 71.2
Gorai.005G064600 Gossypium raimondii HOM05D007671 ORTHO05D009777 1.6e-16 89.4 59 71.2
CiPaw.02G098900 Carya illinoinensis HOM05D007671 ORTHO05D009777 4.5e-16 87.8 57 77.2
Gohir.D02G056933 Gossypium hirsutum HOM05D007671 ORTHO05D009777 5.9e-16 87.4 59 71.2
Prupe.1G232200 Prunus persica HOM05D007671 ORTHO05D009777 5.9e-16 87.4 55 78.2
Prupe.1G135800 Prunus persica HOM05D007671 ORTHO05D009777 7.7e-16 87.0 51 80.4
Gorai.007G266800 Gossypium raimondii HOM05D007671 ORTHO05D009777 1.3e-15 86.3 57 73.7
Manes.06G007051 Manihot esculenta HOM05D007671 ORTHO05D009777 2.9e-15 85.1 56 76.8
Gohir.1Z049332 Gossypium hirsutum HOM05D007671 ORTHO05D009777 6.6e-15 84.0 58 69.0
CiPaw.01G168300 Carya illinoinensis HOM05D007671 ORTHO05D009777 5.5e-14 80.9 61 63.9
Manes.01G190050 Manihot esculenta HOM05D007671 ORTHO05D009777 2.8e-13 78.6 56 69.6
CiPaw.08G017600 Carya illinoinensis HOM05D007671 ORTHO05D009777 8.0e-13 77.0 50 70.0
Migut.N01038 Erythranthe guttata HOM05D007671 ORTHO05D009777 1.8e-12 75.9 58 65.5
Manes.06G006950 Manihot esculenta HOM05D007671 ORTHO05D009777 4.0e-12 74.7 49 75.5
Thhalv10009901m.g Eutrema salsugineum HOM05D007671 ORTHO05D009777 1.5e-11 72.8 58 65.5
Gohir.A02G052202 Gossypium hirsutum HOM05D007671 ORTHO05D009777 2.6e-11 72.0 57 63.2
Manes.14G093601 Manihot esculenta HOM05D007671 ORTHO05D009777 5.7e-11 70.9 53 67.9
Migut.E00372 Erythranthe guttata HOM05D007671 ORTHO05D009777 1.3e-10 69.7 57 66.7
Manes.01G151801 Manihot esculenta HOM05D007671 ORTHO05D009777 2.8e-10 68.6 40 82.5
Carub.0005s0180 Capsella rubella HOM05D007671 ORTHO05D009777 4.9e-10 67.8 58 60.3
Carub.0005s0319 Capsella rubella HOM05D007671 ORTHO05D009777 8.3e-10 67.0 58 60.3
FAN20G2582 Fragaria x ananassa HOM05D007671 ORTHO05D035424 1.1e-09 66.6 43 72.1
A06p47690 Brassica napus HOM05D007671 ORTHO05D009777 1.8e-09 65.9 60 60.0
Potri.008G047850 Populus trichocarpa HOM05D007671 ORTHO05D009777 9.2e-09 63.5 54 64.8
Gohir.D02G057184 Gossypium hirsutum HOM05D007671 ORTHO05D009777 4.5e-08 61.2 41 75.6
C03p61310 Brassica napus HOM05D007671 ORTHO05D009777 5.9e-08 60.8 57 54.4
Potri.007G002300 Populus trichocarpa HOM05D007671 ORTHO05D009777 1.3e-07 59.7 46 60.9
PGSC0003DMG401028532 Solanum tuberosum HOM05D007671 ORTHO05D009777 1.3e-07 59.7 43 65.1
Os02g0158701 Oryza sativa ssp. japonica HOM05D007671 ORTHO05D009777 2.9e-07 58.5 36 66.7
Migut.N02391 Erythranthe guttata HOM05D007671 ORTHO05D009777 5.0e-07 57.8 45 66.7
Os02g0811501 Oryza sativa ssp. japonica HOM05D007671 ORTHO05D009777 1.9e-06 55.8 36 66.7
Prupe.1G136100 Prunus persica HOM05D007671 ORTHO05D009777 3.3e-06 55.1 31 87.1
Os07g0685600 Oryza sativa ssp. japonica HOM05D007671 ORTHO05D009777 4.3e-06 54.7 36 61.1
Os02g0811650 Oryza sativa ssp. japonica HOM05D007671 ORTHO05D009777 5.6e-06 54.3 38 63.2
Os02g0159850 Oryza sativa ssp. japonica HOM05D007671 ORTHO05D009777 7.3e-06 53.9 36 63.9
Gohir.A08G235950 Gossypium hirsutum HOM05D007671 ORTHO05D009777 9.5e-06 53.5 26 96.2
Gohir.D08G256350 Gossypium hirsutum HOM05D007671 ORTHO05D009777 9.5e-06 53.5 26 96.2
Os07g0595750 Oryza sativa ssp. japonica HOM05D007671 ORTHO05D009777 9.5e-06 53.5 36 63.9


User provided reference genes

Program Settings