Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.1G077300 Prunus persica HOM05D007631 ORTHO05D009566 7.1e-98 360.5 174 100.0
RcHm_v2.0_Chr4g0399891 Rosa chinensis HOM05D007631 ORTHO05D009566 2.5e-71 272.3 178 78.7
FvH4_4g07430 Fragaria vesca HOM05D007631 ORTHO05D009566 1.3e-67 260.0 170 78.2
FAN17G2236 Fragaria x ananassa HOM05D007631 ORTHO05D009566 1.1e-66 256.9 172 75.6
FAN12G2650 Fragaria x ananassa HOM05D007631 ORTHO05D009566 2.5e-63 245.7 163 77.3
MD16G1250700 Malus domestica HOM05D007631 ORTHO05D009566 8.2e-62 240.7 158 75.3
FAN07G2143 Fragaria x ananassa HOM05D007631 ORTHO05D009566 1.0e-59 233.8 172 72.7
CiPaw.09G164100 Carya illinoinensis HOM05D007631 ORTHO05D009566 2.5e-50 202.6 169 64.5
FAN22G0357 Fragaria x ananassa HOM05D007631 ORTHO05D009566 4.2e-50 201.8 139 75.5
Potri.005G094700 Populus trichocarpa HOM05D007631 ORTHO05D009566 3.6e-49 198.7 170 64.7
CsaV3_3G031500 Cucumis sativus L. HOM05D007631 ORTHO05D009566 3.0e-48 195.7 168 61.9
Duzib268G1119 Durio zibethinus HOM05D007631 ORTHO05D009566 6.7e-48 194.5 176 58.0
Manes.04G066700 Manihot esculenta HOM05D007631 ORTHO05D009566 3.3e-47 192.2 169 59.8
Gohir.A03G110300 Gossypium hirsutum HOM05D007631 ORTHO05D009566 4.4e-47 191.8 179 55.9
Thecc.02G311600 Theobroma cacao HOM05D007631 ORTHO05D009566 2.2e-46 189.5 178 59.0
TWI53G1419 Tripterygium wilfordii HOM05D007631 ORTHO05D009566 2.8e-46 189.1 171 58.5
GSVIVG01010153001 Vitis vinifera HOM05D007631 ORTHO05D009566 8.2e-46 187.6 172 58.1
QL03p043760 Quercus lobata HOM05D007631 ORTHO05D009566 1.1e-45 187.2 115 72.2
Gorai.005G150800 Gossypium raimondii HOM05D007631 ORTHO05D009566 2.4e-45 186.0 180 54.4
Gohir.D02G134900 Gossypium hirsutum HOM05D007631 ORTHO05D009566 7.0e-45 184.5 179 53.6
CsaV3_3G032520 Cucumis sativus L. HOM05D007631 ORTHO05D009566 3.5e-44 182.2 166 57.2
Cpa.g.sc63.2 Carica papaya HOM05D007631 ORTHO05D009566 7.7e-44 181.0 117 69.2
Nn4g24939 Nelumbo nucifera HOM05D007631 ORTHO05D009566 5.5e-42 174.9 178 52.2
Eucgr.J00853 Eucalyptus grandis HOM05D007631 ORTHO05D009566 2.7e-41 172.6 123 67.5
Ciclev10032529m.g Citrus clementina HOM05D007631 ORTHO05D009566 1.8e-40 169.9 177 53.7
HanXRQChr17g0540801 Helianthus annuus HOM05D007631 ORTHO05D009566 4.0e-40 168.7 172 51.2
Lsat_1_v5_gn_3_33601 Lactuca sativa HOM05D007631 ORTHO05D009566 2.6e-39 166.0 173 51.4
ClCG10G011860 Citrullus lanatus HOM05D007631 ORTHO05D009566 3.3e-39 165.6 118 66.1
MELO3C024033.2 Cucumis melo HOM05D007631 ORTHO05D009566 3.3e-39 165.6 203 45.8
ECA246G0740 Erigeron canadensis HOM05D007631 ORTHO05D009566 4.4e-39 165.2 142 54.9
Hma1.2p1_0499F.1_g166830 Hydrangea macrophylla HOM05D007631 ORTHO05D009566 4.4e-39 165.2 193 48.7
CAN.G157.15 Capsicum annuum HOM05D007631 ORTHO05D009566 1.1e-37 160.6 148 54.1
Glyma.11G102300 Glycine max HOM05D007631 ORTHO05D009566 1.1e-37 160.6 178 51.7
COL.COLO4_27670 Corchorus olitorius HOM05D007631 ORTHO05D009566 2.4e-37 159.5 146 58.9
Cc11_g05090 Coffea canephora HOM05D007631 ORTHO05D009566 5.3e-37 158.3 145 55.2
Nitab4.5_0002392g0040 Nicotiana tabacum HOM05D007631 ORTHO05D009566 5.3e-37 158.3 153 52.9
AUR62015208 Chenopodium quinoa HOM05D007631 ORTHO05D009566 7.0e-37 157.9 169 50.9
Lalb_Chr03g0024841 Lupinus albus HOM05D007631 ORTHO05D009566 7.0e-37 157.9 174 49.4
PGR119G1778 Punica granatum HOM05D007631 ORTHO05D009566 7.0e-37 157.9 127 59.1
CANSAT64G0359 Cannabis sativa HOM05D007631 ORTHO05D009566 1.2e-36 157.1 166 51.2
Dinv17601 Davidia involucrata HOM05D007631 ORTHO05D009566 1.2e-36 157.1 149 55.0
Atru.chr11.1322 Acer truncatum HOM05D007631 ORTHO05D009566 1.6e-36 156.8 114 67.5
Lj3g0001232 Lotus japonicus HOM05D007631 ORTHO05D009566 3.5e-36 155.6 184 50.0
PGSC0003DMG400029978 Solanum tuberosum HOM05D007631 ORTHO05D009566 3.5e-36 155.6 138 54.3
VMungo1127G1566 Vigna mungo HOM05D007631 ORTHO05D009566 2.9e-35 152.5 139 57.6
EL10Ac9g22926 Beta vulgaris HOM05D007631 ORTHO05D009566 2.5e-34 149.4 176 45.5
arahy.Tifrunner.gnm1.ann1.C4PR70 Arachis hypogaea HOM05D007631 ORTHO05D009566 3.2e-34 149.1 134 56.0
Sc10g0006760 Simmondsia chinensis HOM05D007631 ORTHO05D009566 9.4e-34 147.5 147 52.4
Solyc02g055440.4 Solanum lycopersicum HOM05D007631 ORTHO05D009566 9.4e-34 147.5 129 54.3
Haze_20362 Corylus avellana HOM05D007631 ORTHO05D009566 1.6e-33 146.7 138 58.0
Hund24286 Selenicereus undatus HOM05D007631 ORTHO05D009566 1.6e-33 146.7 151 48.3
Medtr4g074590 Medicago truncatula HOM05D007631 ORTHO05D009566 8.0e-33 144.4 120 60.0
Sopen02g009160 Solanum pennellii HOM05D007631 ORTHO05D009566 8.0e-33 144.4 129 52.7
Aa31LG8G6570 Aethionema arabicum HOM05D007631 ORTHO05D009566 3.0e-32 142.5 144 50.0
Thhalv10021444m.g Eutrema salsugineum HOM05D007631 ORTHO05D009566 3.0e-32 142.5 166 47.6
Aqoxy7G02010 Aquilegia oxysepala HOM05D007631 ORTHO05D009566 6.8e-32 141.4 134 54.5
Sp3g17810 Schrenkiella parvula HOM05D007631 ORTHO05D009566 8.8e-32 141.0 163 46.6
SalBow6G3201 Salvia bowleyana HOM05D007631 ORTHO05D009566 1.5e-31 140.2 131 54.2
Carub.0003s1968 Capsella rubella HOM05D007631 ORTHO05D009566 9.8e-31 137.5 169 45.0
A01p34940 Brassica napus HOM05D007631 ORTHO05D009566 1.3e-30 137.1 166 42.8
BraA01t03577Z Brassica rapa HOM05D007631 ORTHO05D009566 1.3e-30 137.1 166 42.8
PSO017G5087 Papaver somniferum HOM05D007631 ORTHO05D009566 1.7e-30 136.7 132 50.0
Psat7g173560 Pisum sativum HOM05D007631 ORTHO05D009566 1.7e-30 136.7 115 58.3
C01p44350 Brassica napus HOM05D007631 ORTHO05D009566 2.2e-30 136.3 166 42.8
BolC1t04400H Brassica oleracea HOM05D007631 ORTHO05D009566 2.2e-30 136.3 166 42.8
Atru.BG.289.p Acer truncatum HOM05D007631 ORTHO05D009566 8.3e-30 134.4 94 66.0
PSO478G5292 Papaver somniferum HOM05D007631 ORTHO05D009566 1.1e-29 134.0 132 50.8
AT3G19800 Arabidopsis thaliana HOM05D007631 ORTHO05D009566 2.4e-29 132.9 118 54.2
AL3G33250 Arabidopsis lyrata HOM05D007631 ORTHO05D009566 3.1e-29 132.5 118 54.2
TPR.G32328 Trifolium pratense HOM05D007631 ORTHO05D009566 5.9e-28 128.3 130 55.4
Ca_03026_v3 Cicer arietinum L. HOM05D007631 ORTHO05D009566 1.3e-27 127.1 137 48.2
CARHR095310 Cardamine hirsuta HOM05D007631 ORTHO05D009566 8.6e-27 124.4 165 43.0
DCAR_030399 Daucus carota HOM05D007631 ORTHO05D009566 1.5e-26 123.6 120 53.3
HPP92_025628 Vanilla planifolia HOM05D007631 ORTHO05D009566 1.5e-26 123.6 119 52.1
TAR622G1133 Trochodendron aralioides HOM05D007631 ORTHO05D009566 1.2e-25 120.6 97 59.8
MBI06_g36505_MAGBIO Magnolia biondii HOM05D007631 ORTHO05D009566 2.1e-25 119.8 86 61.6
Phvul.011G031300 Phaseolus vulgaris HOM05D007631 ORTHO05D009566 2.8e-25 119.4 111 56.8
Sed0008358 Sechium edule HOM05D007631 ORTHO05D009566 2.8e-25 119.4 167 46.1
vmacro10901 Vaccinium macrocarpon HOM05D007631 ORTHO05D009566 8.9e-24 114.4 166 39.8
ATR0618G124 Amborella trichopoda HOM05D007631 ORTHO05D009566 2.2e-22 109.8 68 66.2
Os04g0525000 Oryza sativa ssp. japonica HOM05D007631 ORTHO05D009566 2.2e-22 109.8 150 40.0
unitig_699.g19551 Utricularia gibba HOM05D007631 ORTHO05D009566 4.9e-22 108.6 112 45.5
Migut.E00703 Erythranthe guttata HOM05D007631 ORTHO05D009566 1.1e-21 107.5 103 53.4
Migut.E00614 Erythranthe guttata HOM05D007631 ORTHO05D009566 1.4e-21 107.1 104 52.9
Cfa019889 Carpinus fangiana HOM05D007631 ORTHO05D009566 1.2e-20 104.0 75 64.0
Zm00001eb076870 Zea mays HOM05D007631 ORTHO05D009566 2.9e-19 99.4 113 44.2
CDE05G3190 Ceratophyllum demersum HOM05D005588 ORTHO05D006615 1.5e-18 97.1 160 39.4
Nitab4.5_0000139g0130 Nicotiana tabacum HOM05D007631 ORTHO05D009566 3.0e-16 89.4 108 47.2
Oeu033537.1 Olea europaea HOM05D007631 ORTHO05D009566 5.2e-16 88.6 89 48.3
SGA_v2.0_scaffold88G27234 Striga asiatica HOM05D007631 ORTHO05D009566 2.3e-11 73.2 82 45.1
SGA_v2.0_scaffold88G27232 Striga asiatica HOM05D007631 ORTHO05D009566 1.5e-10 70.5 63 49.2
arahy.Tifrunner.gnm1.ann1.GZ47R7 Arachis hypogaea HOM05D007631 ORTHO05D009566 3.1e-08 62.8 77 48.1
Pp3c1_30620 Physcomitrium patens HOM05D007631 ORTHO05D009566 7.5e-07 58.2 133 30.8


User provided reference genes

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