Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.1G076700 Prunus persica HOM05D006321 ORTHO05D007929 3.7e-93 344.7 161 100.0
RcHm_v2.0_Chr4g0399821 Rosa chinensis HOM05D006321 ORTHO05D007929 6.6e-82 307.4 161 86.3
Dinv25432 Davidia involucrata HOM05D006321 ORTHO05D007929 1.4e-79 299.7 161 84.5
TAR622G0244 Trochodendron aralioides HOM05D006321 ORTHO05D007929 1.4e-79 299.7 158 84.2
QL02p047686 Quercus lobata HOM05D006321 ORTHO05D007929 5.2e-79 297.7 160 83.1
Aqoxy3G01064 Aquilegia oxysepala HOM05D006321 ORTHO05D007929 1.5e-78 296.2 161 80.1
FvH4_4g07380 Fragaria vesca HOM05D006321 ORTHO05D007929 2.0e-78 295.8 157 84.1
FAN12G2844 Fragaria x ananassa HOM05D006321 ORTHO05D007929 2.0e-78 295.8 157 84.1
FAN22G1279 Fragaria x ananassa HOM05D006321 ORTHO05D007929 2.0e-78 295.8 157 84.1
Glyma.01G110600 Glycine max HOM05D006321 ORTHO05D007929 2.0e-78 295.8 161 83.2
CSS0046955 Camellia sinensis var. sinensis HOM05D006321 ORTHO05D007929 7.5e-78 293.9 158 83.5
Sc03g0007150 Simmondsia chinensis HOM05D006321 ORTHO05D007929 2.2e-77 292.4 158 82.3
CSS0019729 Camellia sinensis var. sinensis HOM05D006321 ORTHO05D007929 6.4e-77 290.8 158 83.5
Atru.chr7.791 Acer truncatum HOM05D006321 ORTHO05D007929 8.3e-77 290.4 158 82.3
TWI60G1509 Tripterygium wilfordii HOM05D006321 ORTHO05D007929 8.3e-77 290.4 161 80.1
CANSAT11G0316 Cannabis sativa HOM05D006321 ORTHO05D007929 1.4e-76 289.7 162 79.6
CSS0021189 Camellia sinensis var. sinensis HOM05D006321 ORTHO05D007929 2.4e-76 288.9 158 82.9
Glyma.03G076300 Glycine max HOM05D006321 ORTHO05D007929 2.4e-76 288.9 161 80.7
MD16G1249800 Malus domestica HOM05D006321 ORTHO05D007929 2.4e-76 288.9 152 90.1
FAN07G2214 Fragaria x ananassa HOM05D006321 ORTHO05D007929 3.2e-76 288.5 152 84.2
PGR142G1933 Punica granatum HOM05D006321 ORTHO05D007929 4.1e-76 288.1 161 80.7
CiPaw.08G033200 Carya illinoinensis HOM05D006321 ORTHO05D007929 5.4e-76 287.7 157 82.2
Cc06_g21570 Coffea canephora HOM05D006321 ORTHO05D007929 5.4e-76 287.7 161 78.9
VMungo0540G0928 Vigna mungo HOM05D006321 ORTHO05D007929 5.4e-76 287.7 161 81.4
GSVIVG01010872001 Vitis vinifera HOM05D006321 ORTHO05D007929 5.4e-76 287.7 155 84.5
MBI17_g07973_MAGBIO Magnolia biondii HOM05D006321 ORTHO05D007929 1.2e-75 286.6 158 80.4
Rhsim01G0118600 Rhododendron simsii HOM05D006321 ORTHO05D007929 1.2e-75 286.6 161 79.5
Eucgr.C00122 Eucalyptus grandis HOM05D006321 ORTHO05D007929 2.7e-75 285.4 159 79.9
Potri.018G143500 Populus trichocarpa HOM05D006321 ORTHO05D007929 3.5e-75 285.0 157 82.8
COL.COLO4_27457 Corchorus olitorius HOM05D006321 ORTHO05D007929 4.6e-75 284.6 161 80.7
Nitab4.5_0002365g0010 Nicotiana tabacum HOM05D006321 ORTHO05D007929 7.8e-75 283.9 161 78.3
Phvul.006G013600 Phaseolus vulgaris HOM05D006321 ORTHO05D007929 1.0e-74 283.5 161 80.7
Ciclev10008911m.g Citrus clementina HOM05D006321 ORTHO05D007929 2.3e-74 282.3 160 79.4
arahy.Tifrunner.gnm1.ann1.CI6UTV Arachis hypogaea HOM05D006321 ORTHO05D007929 3.9e-74 281.6 157 80.3
Nitab4.5_0000366g0180 Nicotiana tabacum HOM05D006321 ORTHO05D007929 3.9e-74 281.6 161 78.3
Sed0024765 Sechium edule HOM05D006321 ORTHO05D007929 3.9e-74 281.6 154 79.9
Thecc.09G184700 Theobroma cacao HOM05D006321 ORTHO05D007929 6.6e-74 280.8 155 81.9
arahy.Tifrunner.gnm1.ann1.N3I1N2 Arachis hypogaea HOM05D006321 ORTHO05D007929 8.6e-74 280.4 152 82.9
CsaV3_3G025050 Cucumis sativus L. HOM05D006321 ORTHO05D007929 1.1e-73 280.0 154 79.2
Duzib251G0486 Durio zibethinus HOM05D006321 ORTHO05D007929 1.1e-73 280.0 162 79.6
EL10Ac5g11827 Beta vulgaris HOM05D006321 ORTHO05D007929 1.5e-73 279.6 161 78.3
MELO3C012967.2 Cucumis melo HOM05D006321 ORTHO05D007929 1.9e-73 279.3 154 78.6
CAN.G279.32 Capsicum annuum HOM05D006321 ORTHO05D007929 3.3e-73 278.5 158 78.5
PSO339G6079 Papaver somniferum HOM05D006321 ORTHO05D007929 3.3e-73 278.5 162 78.4
A10p14640 Brassica napus HOM05D006321 ORTHO05D007929 7.3e-73 277.3 161 75.2
BraA10t43551Z Brassica rapa HOM05D006321 ORTHO05D007929 7.3e-73 277.3 161 75.2
Medtr3g465100 Medicago truncatula HOM05D006321 ORTHO05D007929 1.2e-72 276.6 161 77.6
AUR62030699 Chenopodium quinoa HOM05D006321 ORTHO05D007929 1.6e-72 276.2 161 76.4
Phvul.003G138800 Phaseolus vulgaris HOM05D006321 ORTHO05D007929 1.6e-72 276.2 161 78.9
Phvul.003G139178 Phaseolus vulgaris HOM05D006321 ORTHO05D007929 1.6e-72 276.2 161 78.9
Potri.006G076300 Populus trichocarpa HOM05D006321 ORTHO05D007929 2.1e-72 275.8 157 79.6
CAN.G547.21 Capsicum annuum HOM05D006321 ORTHO05D007929 2.8e-72 275.4 158 77.2
COL.COLO4_07534 Corchorus olitorius HOM05D006321 ORTHO05D007929 2.8e-72 275.4 151 82.8
Psat2g182520 Pisum sativum HOM05D006321 ORTHO05D004512 2.8e-72 275.4 158 77.8
Psat4g027120 Pisum sativum HOM05D006321 ORTHO05D007929 2.8e-72 275.4 158 77.8
AUR62030694 Chenopodium quinoa HOM05D006321 ORTHO05D007929 3.6e-72 275.0 161 75.8
Lalb_Chr04g0263391 Lupinus albus HOM05D006321 ORTHO05D007929 3.6e-72 275.0 159 76.7
Ca_14974_v3 Cicer arietinum L. HOM05D006321 ORTHO05D007929 6.2e-72 274.2 161 77.6
Thhalv10014893m.g Eutrema salsugineum HOM05D006321 ORTHO05D007929 6.2e-72 274.2 161 74.5
BcaC04g19986 Brassica carinata HOM05D006321 ORTHO05D007929 8.1e-72 273.9 161 73.9
Solyc07g008910.3 Solanum lycopersicum HOM05D006321 ORTHO05D007929 8.1e-72 273.9 158 76.6
Gohir.A06G171500 Gossypium hirsutum HOM05D006321 ORTHO05D007929 1.1e-71 273.5 156 78.2
Gorai.010G210200 Gossypium raimondii HOM05D006321 ORTHO05D007929 1.1e-71 273.5 156 78.2
Manes.02G106300 Manihot esculenta HOM05D006321 ORTHO05D007929 1.1e-71 273.5 161 77.6
MSTRG.10445 Avicennia marina HOM05D006321 ORTHO05D007929 1.4e-71 273.1 161 75.8
AL8G33200 Arabidopsis lyrata HOM05D006321 ORTHO05D007929 2.4e-71 272.3 161 73.3
Sp6g18970 Schrenkiella parvula HOM05D006321 ORTHO05D007929 2.4e-71 272.3 161 73.9
PGSC0003DMG400028738 Solanum tuberosum HOM05D006321 ORTHO05D007929 2.4e-71 272.3 158 75.3
THA.LOC104817778 Tarenaya hassleriana HOM05D006321 ORTHO05D007929 2.4e-71 272.3 162 75.9
Carub.0008s1773 Capsella rubella HOM05D006321 ORTHO05D007929 3.1e-71 271.9 161 72.7
Gohir.D06G179600 Gossypium hirsutum HOM05D006321 ORTHO05D007929 4.0e-71 271.6 156 77.6
Lj6g0010246 Lotus japonicus HOM05D006321 ORTHO05D007929 4.0e-71 271.6 154 79.9
BcaB08g36085 Brassica carinata HOM05D006321 ORTHO05D007929 5.2e-71 271.2 161 73.9
PSO384G3851 Papaver somniferum HOM05D006321 ORTHO05D007929 6.8e-71 270.8 162 75.9
AT5G57230 Arabidopsis thaliana HOM05D006321 ORTHO05D007929 8.9e-71 270.4 161 72.7
CARHR271020 Cardamine hirsuta HOM05D006321 ORTHO05D007929 8.9e-71 270.4 161 73.9
TPR.G32885 Trifolium pratense HOM05D006321 ORTHO05D007929 8.9e-71 270.4 161 75.8
HPP92_002000 Vanilla planifolia HOM05D006321 ORTHO05D007929 1.5e-70 269.6 157 74.5
HanXRQChr16g0529271 Helianthus annuus HOM05D006321 ORTHO05D007929 5.8e-70 267.7 158 74.1
C09p49090 Brassica napus HOM05D006321 ORTHO05D007929 1.3e-69 266.5 169 70.4
BolC9t57758H Brassica oleracea HOM05D006321 ORTHO05D007929 2.2e-69 265.8 167 70.7
MD13G1243200 Malus domestica HOM05D006321 ORTHO05D007929 3.8e-69 265.0 138 87.7
Hund14984 Selenicereus undatus HOM05D006321 ORTHO05D007929 8.4e-69 263.8 214 58.9
Aa31LG3G13120 Aethionema arabicum HOM05D006321 ORTHO05D007929 1.4e-68 263.1 161 71.4
ECA240G2363 Erigeron canadensis HOM05D006321 ORTHO05D007929 1.4e-68 263.1 154 74.7
Migut.L01889 Erythranthe guttata HOM05D006321 ORTHO05D007929 1.4e-68 263.1 158 73.4
Ah.12g059430 Amaranthus hybridus HOM05D006321 ORTHO05D007929 5.4e-68 261.2 162 72.2
HanXRQChr03g0068421 Helianthus annuus HOM05D006321 ORTHO05D007929 5.4e-68 261.2 149 75.8
ECA234G0872 Erigeron canadensis HOM05D006321 ORTHO05D007929 1.6e-67 259.6 154 74.7
Os06g0482200 Oryza sativa ssp. japonica HOM05D006321 ORTHO05D007929 1.6e-67 259.6 155 71.6
Os10g0162834 Oryza sativa ssp. japonica HOM05D006321 ORTHO05D007929 1.7e-66 256.1 155 70.3
Nn2g12444 Nelumbo nucifera HOM05D006321 ORTHO05D007929 3.9e-66 255.0 140 78.6
SGA_v2.0_scaffold21G09650 Striga asiatica HOM05D006321 ORTHO05D007929 3.9e-66 255.0 158 72.2
Lsat_1_v5_gn_7_55681 Lactuca sativa HOM05D006321 ORTHO05D007929 8.6e-66 253.8 158 72.2
Actinidia01283 Actinidia chinensis HOM05D006321 ORTHO05D007929 5.6e-65 251.1 161 72.7
CDE06G2300 Ceratophyllum demersum HOM05D006321 ORTHO05D007929 7.3e-65 250.8 138 80.4
Zm00001eb161640 Zea mays HOM05D006321 ORTHO05D007929 2.8e-64 248.8 148 72.3
Cpa.g.sc95.16 Carica papaya HOM05D006321 ORTHO05D007929 6.2e-64 247.7 161 72.0
unitig_736.g22252 Utricularia gibba HOM05D006321 ORTHO05D007929 6.2e-64 247.7 137 77.4
SEGI_34333 Sequoiadendron giganteum HOM05D006321 ORTHO05D007929 1.1e-63 246.9 155 69.0
Haze_22010 Corylus avellana HOM05D006321 ORTHO05D007929 3.4e-62 241.9 152 75.0
AUR62036340 Chenopodium quinoa HOM05D006321 ORTHO05D007929 9.3e-60 233.8 135 76.3
Sopen07g004840 Solanum pennellii HOM05D003168 ORTHO05D003590 1.3e-58 229.9 135 74.8
Sabra18G0117000 Salix brachista HOM05D003168 ORTHO05D003525 2.8e-56 222.2 122 82.0
Psat5g235880 Pisum sativum HOM05D006321 ORTHO05D007929 1.2e-54 216.9 116 82.8
FAN17G2672 Fragaria x ananassa HOM05D006321 ORTHO05D007929 3.4e-54 215.3 160 66.2
Migut.G01073 Erythranthe guttata HOM05D006321 ORTHO05D007929 1.3e-53 213.4 118 78.8
Pp3c22_13020 Physcomitrium patens HOM05D006321 ORTHO05D007929 2.9e-53 212.2 145 62.8
Mapoly0003s0233 Marchantia polymorpha HOM05D006321 ORTHO05D007929 1.4e-52 209.9 142 62.7
Sabra06G0057200 Salix brachista HOM05D006321 ORTHO05D007929 1.2e-51 206.8 183 57.4
vmacro20823 Vaccinium macrocarpon HOM05D006321 ORTHO05D007929 6.0e-51 204.5 138 67.4
Mapoly0003s0169 Marchantia polymorpha HOM05D006321 ORTHO05D007929 2.3e-50 202.6 142 60.6
PSO541G2755 Papaver somniferum HOM05D006321 ORTHO05D007929 2.3e-50 202.6 114 78.9
Oeu044678.1 Olea europaea HOM05D006321 ORTHO05D007929 3.0e-50 202.2 114 77.2
Oeu030095.1 Olea europaea HOM05D006321 ORTHO05D007929 4.8e-48 194.9 115 76.5
Aqoxy108s003 Aquilegia oxysepala HOM05D006321 ORTHO05D007929 4.0e-47 191.8 132 64.4
Peaxi162Scf00324g00017 Petunia axillaris HOM05D006321 ORTHO05D007929 3.4e-46 188.7 105 79.0
ATR1152G025 Amborella trichopoda HOM05D006321 ORTHO05D007929 6.4e-45 184.5 96 80.2
Lj6A87G16 Lonicera japonica HOM05D006321 ORTHO05D007929 4.2e-44 181.8 95 84.2
DCAR_005801 Daucus carota HOM05D006321 ORTHO05D007929 4.8e-40 168.3 102 70.6
CBR_g19745 Chara braunii HOM05D006321 ORTHO05D007929 1.0e-37 160.6 132 56.1
BcaB05g22329 Brassica carinata HOM05D006321 ORTHO05D007929 2.5e-36 156.0 157 52.2
Dinv41168 Davidia involucrata HOM05D000015 ORTHO05D003525 7.4e-33 144.4 86 75.6
TAR629G2308 Trochodendron aralioides HOM05D006321 ORTHO05D007929 9.7e-33 144.1 85 76.5
COL.COLO4_32845 Corchorus olitorius HOM05D006321 ORTHO05D007929 1.3e-32 143.7 85 76.5
Lj6A100T20 Lonicera japonica HOM05D006321 ORTHO05D007929 3.2e-28 129.0 73 79.5
Sopen00g012850 Solanum pennellii HOM05D006321 ORTHO05D007929 2.7e-19 99.4 52 80.8
BolC2t07570H Brassica oleracea HOM05D006321 ORTHO05D007929 1.4e-15 87.0 60 65.0
C02p14450 Brassica napus HOM05D006321 ORTHO05D007929 4.1e-07 58.9 71 40.8


User provided reference genes

Program Settings