Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.1G074500 Prunus persica HOM05D006498 ORTHO05D006377 8.7e-182 640.6 424 100.0
MD13G1239600 Malus domestica HOM05D006498 ORTHO05D006377 1.2e-98 364.4 435 62.8
FAN17G1293 Fragaria x ananassa HOM05D006498 ORTHO05D006377 3.1e-78 296.6 431 53.1
FvH4_4g07150 Fragaria vesca HOM05D006498 ORTHO05D006377 5.4e-75 285.8 433 53.8
Haze_22031 Corylus avellana HOM05D006498 ORTHO05D006377 1.1e-72 278.1 439 53.3
FAN12G3360 Fragaria x ananassa HOM05D006498 ORTHO05D006377 2.5e-72 276.9 433 52.0
Ca_21256_v3 Cicer arietinum L. HOM05D006498 ORTHO05D006377 1.0e-65 255.0 435 49.4
FAN22G0654 Fragaria x ananassa HOM05D006498 ORTHO05D006377 2.3e-65 253.8 484 46.3
RcHm_v2.0_Chr4g0399301 Rosa chinensis HOM05D006498 ORTHO05D006377 1.9e-64 250.8 467 48.6
VMungo1215G1417 Vigna mungo HOM05D006498 ORTHO05D006377 2.5e-64 250.4 449 47.0
Cfa013457 Carpinus fangiana HOM05D006498 ORTHO05D006377 2.1e-63 247.3 441 50.6
TWI34G1139 Tripterygium wilfordii HOM05D006498 ORTHO05D006377 8.1e-63 245.4 444 47.3
Duzib150G1211 Durio zibethinus HOM05D006498 ORTHO05D006377 2.6e-61 240.4 446 50.4
TWI32G0168 Tripterygium wilfordii HOM05D006498 ORTHO05D006377 5.8e-61 239.2 425 43.5
CiPaw.07G197600 Carya illinoinensis HOM05D006498 ORTHO05D006377 1.2e-58 231.5 432 47.2
Manes.14G159400 Manihot esculenta HOM05D006498 ORTHO05D006377 1.6e-58 231.1 439 45.8
Sc18g0007220 Simmondsia chinensis HOM05D006498 ORTHO05D006377 7.8e-58 228.8 359 49.0
CSS0012471 Camellia sinensis var. sinensis HOM05D006498 ORTHO05D006377 1.0e-57 228.4 470 44.7
arahy.Tifrunner.gnm1.ann1.XIUU7W Arachis hypogaea HOM05D006498 ORTHO05D006377 1.7e-57 227.6 446 46.9
Medtr4g127350 Medicago truncatula HOM05D006498 ORTHO05D006377 1.7e-57 227.6 439 48.5
arahy.Tifrunner.gnm1.ann1.YNM2K2 Arachis hypogaea HOM05D006498 ORTHO05D006377 3.9e-57 226.5 448 46.9
Phvul.003G140900 Phaseolus vulgaris HOM05D006498 ORTHO05D006377 2.5e-56 223.8 439 46.9
Hma1.2p1_0491F.1_g164630 Hydrangea macrophylla HOM05D006498 ORTHO05D006377 9.6e-56 221.9 446 45.3
Glyma.13G101000 Glycine max HOM05D006498 ORTHO05D006377 3.6e-55 219.9 319 50.5
Sed0023189 Sechium edule HOM05D006498 ORTHO05D006377 6.2e-55 219.2 446 46.4
CsaV3_1G031910 Cucumis sativus L. HOM05D006498 ORTHO05D006377 1.4e-54 218.0 418 50.2
Lsat_1_v5_gn_9_16541 Lactuca sativa HOM05D006498 ORTHO05D006377 1.4e-54 218.0 462 42.2
Atru.chr7.955 Acer truncatum HOM05D006498 ORTHO05D006377 3.1e-54 216.9 430 50.0
CAN.G844.1 Capsicum annuum HOM05D006498 ORTHO05D006377 3.1e-54 216.9 462 44.2
Aa31LG8G16310 Aethionema arabicum HOM05D006498 ORTHO05D006377 9.0e-54 215.3 337 49.0
MELO3C017425.2 Cucumis melo HOM05D006498 ORTHO05D006377 9.0e-54 215.3 424 47.9
Potri.006G075000 Populus trichocarpa HOM05D006498 ORTHO05D006377 9.0e-54 215.3 438 50.5
SGA_v2.0_scaffold95G28702 Striga asiatica HOM05D006498 ORTHO05D006377 9.0e-54 215.3 465 42.8
GSVIVG01029313001 Vitis vinifera HOM05D006498 ORTHO05D006377 3.4e-53 213.4 434 46.5
Gohir.D13G212600 Gossypium hirsutum HOM05D006498 ORTHO05D006377 9.9e-53 211.8 455 45.1
Gorai.013G243000 Gossypium raimondii HOM05D006498 ORTHO05D006377 9.9e-53 211.8 455 45.1
Thecc.09G186800 Theobroma cacao HOM05D006498 ORTHO05D006377 1.3e-52 211.5 434 49.8
Eucgr.C00107 Eucalyptus grandis HOM05D006498 ORTHO05D006377 2.9e-52 210.3 338 50.3
Lj4g0022386 Lotus japonicus HOM05D006498 ORTHO05D006377 2.9e-52 210.3 448 44.2
CANSAT11G0487 Cannabis sativa HOM05D006498 ORTHO05D006377 4.9e-52 209.5 330 49.7
Actinidia23350 Actinidia chinensis HOM05D006498 ORTHO05D006377 2.4e-51 207.2 462 40.7
AL3G49020 Arabidopsis lyrata HOM05D006498 ORTHO05D006377 3.2e-51 206.8 433 41.8
Nitab4.5_0000038g0230 Nicotiana tabacum HOM05D006498 ORTHO05D006377 5.4e-51 206.1 448 43.5
Gohir.A13G208200 Gossypium hirsutum HOM05D006498 ORTHO05D006377 9.3e-51 205.3 354 49.4
SalBow3G4321 Salvia bowleyana HOM05D006498 ORTHO05D006377 9.3e-51 205.3 453 42.8
THA.LOC104820009 Tarenaya hassleriana HOM05D006498 ORTHO05D006377 9.3e-51 205.3 434 44.7
AT2G19270 Arabidopsis thaliana HOM05D006498 ORTHO05D006377 2.1e-50 204.1 440 43.2
HanXRQChr07g0190541 Helianthus annuus HOM05D006498 ORTHO05D006377 2.7e-50 203.8 438 43.8
Psat0s3389g0200 Pisum sativum HOM05D006498 ORTHO05D006377 3.5e-50 203.4 317 51.4
Ciclev10008415m.g Citrus clementina HOM05D006498 ORTHO05D006377 6.0e-50 202.6 446 45.3
Dinv28799 Davidia involucrata HOM05D006498 ORTHO05D006377 7.9e-50 202.2 283 51.2
PGR142G3062 Punica granatum HOM05D006498 ORTHO05D006377 1.0e-49 201.8 472 41.3
PGR142G3622 Punica granatum HOM05D006498 ORTHO05D006377 1.0e-49 201.8 472 41.3
Sopen09g019810 Solanum pennellii HOM05D006498 ORTHO05D006377 2.3e-49 200.7 325 48.3
Sabra06G0055700 Salix brachista HOM05D006498 ORTHO05D006377 3.9e-49 199.9 521 39.2
ClCG06G013640 Citrullus lanatus HOM05D006498 ORTHO05D006377 5.1e-49 199.5 434 45.9
unitig_60.g25575 Utricularia gibba HOM05D006498 ORTHO05D006377 8.7e-49 198.7 458 37.3
Nn4g25125 Nelumbo nucifera HOM05D006498 ORTHO05D006377 2.5e-48 197.2 502 36.7
Cc01_g15950 Coffea canephora HOM05D006498 ORTHO05D006377 4.3e-48 196.4 483 42.0
MSTRG.17962 Avicennia marina HOM05D006498 ORTHO05D006377 1.3e-47 194.9 490 41.4
Migut.N00676 Erythranthe guttata HOM05D006498 ORTHO05D006377 1.6e-47 194.5 451 41.9
EL10Ac8g19141 Beta vulgaris HOM05D006498 ORTHO05D006377 1.4e-46 191.4 438 45.4
Aqoxy7G02850 Aquilegia oxysepala HOM05D006498 ORTHO05D006377 6.9e-46 189.1 459 38.3
Nitab4.5_0005686g0030 Nicotiana tabacum HOM05D006498 ORTHO05D006377 9.0e-46 188.7 447 42.5
Peaxi162Scf00235g00219 Petunia axillaris HOM05D006498 ORTHO05D006377 1.2e-45 188.3 437 39.8
Thhalv10022749m.g Eutrema salsugineum HOM05D006498 ORTHO05D006377 3.4e-45 186.8 436 42.7
Hma1.2p1_0491F.1_g164640 Hydrangea macrophylla HOM05D006498 ORTHO05D006377 5.8e-45 186.0 123 75.6
CARHR109730 Cardamine hirsuta HOM05D006498 ORTHO05D006377 2.2e-44 184.1 370 43.2
Glyma.17G058700 Glycine max HOM05D006498 ORTHO05D006377 4.9e-44 183.0 437 46.7
Lj2A1114T36 Lonicera japonica HOM05D006498 ORTHO05D006377 2.5e-43 180.6 450 38.4
Oeu003665.1 Olea europaea HOM05D006498 ORTHO05D006377 2.1e-42 177.6 476 39.5
DCAR_004773 Daucus carota HOM05D006498 ORTHO05D006377 3.5e-42 176.8 361 45.2
AUR62025173 Chenopodium quinoa HOM05D006498 ORTHO05D006377 4.6e-42 176.4 158 58.9
MBI16_g05840_MAGBIO Magnolia biondii HOM05D006498 ORTHO05D006377 8.7e-41 172.2 388 44.8
ECA247G1929 Erigeron canadensis HOM05D000109 ORTHO05D006377 1.9e-40 171.0 448 41.5
Lalb_Chr12g0199631 Lupinus albus HOM05D006498 ORTHO05D006377 4.3e-40 169.9 117 71.8
PSO063G6554 Papaver somniferum HOM05D006498 ORTHO05D006377 1.1e-38 165.2 368 41.6
Sp3g32630 Schrenkiella parvula HOM05D006498 ORTHO05D006377 1.4e-38 164.9 439 42.4
Lsat_1_v5_gn_3_41001 Lactuca sativa HOM05D006498 ORTHO05D006377 1.8e-38 164.5 99 83.8
BcaB03g16716 Brassica carinata HOM05D006498 ORTHO05D006377 6.9e-38 162.5 321 45.2
PSO170G2385 Papaver somniferum HOM05D006498 ORTHO05D006377 6.9e-38 162.5 367 42.8
Rhsim13G0054400 Rhododendron simsii HOM05D006498 ORTHO05D006377 2.6e-37 160.6 363 36.9
Zm00001eb233520 Zea mays HOM05D006498 ORTHO05D006377 4.5e-37 159.8 175 54.3
Carub.0003s3350 Capsella rubella HOM05D006498 ORTHO05D006377 5.8e-37 159.5 434 39.6
CDE05G1404 Ceratophyllum demersum HOM05D006498 ORTHO05D006377 7.6e-37 159.1 335 41.2
Os02g0175900 Oryza sativa ssp. japonica HOM05D006498 ORTHO05D006377 1.3e-36 158.3 99 77.8
C07p03100 Brassica napus HOM05D006498 ORTHO05D006377 2.2e-36 157.5 432 38.7
Lsat_1_v5_gn_7_52821 Lactuca sativa HOM05D006498 ORTHO05D006377 3.8e-36 156.8 99 80.8
BraA07t27953Z Brassica rapa HOM05D006498 ORTHO05D006377 4.9e-36 156.4 319 45.1
Lsat_1_v5_gn_4_158461 Lactuca sativa HOM05D006498 ORTHO05D006377 4.9e-36 156.4 107 77.6
Zm00001eb206900 Zea mays HOM05D006498 ORTHO05D006377 6.5e-36 156.0 359 39.6
BcaC06g36544 Brassica carinata HOM05D006498 ORTHO05D006377 1.1e-35 155.2 432 38.4
BolC7t40702H Brassica oleracea HOM05D006498 ORTHO05D006377 1.1e-35 155.2 432 39.1
Lsat_1_v5_gn_9_15580 Lactuca sativa HOM05D006498 ORTHO05D006377 2.5e-35 154.1 95 82.1
Lsat_1_v5_gn_5_22180 Lactuca sativa HOM05D006498 ORTHO05D006377 1.2e-34 151.8 97 79.4
Cpa.g.sc2680.1 Carica papaya HOM05D006498 ORTHO05D006377 1.3e-33 148.3 351 48.4
vmacro02834 Vaccinium macrocarpon HOM05D006498 ORTHO05D006377 1.8e-33 147.9 448 37.1
A07p01520 Brassica napus HOM05D006498 ORTHO05D006377 1.5e-32 144.8 378 40.5
HPP92_011644 Vanilla planifolia HOM05D006498 ORTHO05D006377 2.5e-32 144.1 448 33.9
ATR0626G368 Amborella trichopoda HOM05D006498 ORTHO05D006377 4.8e-31 139.8 495 32.9
Mapoly0001s0081 Marchantia polymorpha HOM05D006498 ORTHO05D006377 1.5e-29 134.8 134 50.7
CDE05G1079 Ceratophyllum demersum HOM05D006498 ORTHO05D006377 6.5e-28 129.4 76 84.2
AagrBONN_evm.TU.Sc2ySwM_228.1455 Anthoceros agrestis HOM05D006498 ORTHO05D006377 2.1e-26 124.4 467 32.8
SMO361G0453 Selaginella moellendorffii HOM05D006498 ORTHO05D006377 2.1e-26 124.4 272 37.1
Lalb_Chr13g0299941 Lupinus albus HOM05D006498 ORTHO05D006377 6.1e-26 122.9 298 35.9
COL.COLO4_06397 Corchorus olitorius HOM05D006498 ORTHO05D006377 1.7e-23 114.8 63 84.1
Ah.09g231280 Amaranthus hybridus HOM05D006498 ORTHO05D006377 2.4e-22 110.9 387 36.7
CBR_g12030 Chara braunii HOM05D006498 ORTHO05D006377 5.3e-22 109.8 84 64.3
Solyc09g055870.2 Solanum lycopersicum HOM05D006498 ORTHO05D006377 9.1e-22 109.0 387 35.9
Pp3c15_6280 Physcomitrium patens HOM05D006498 ORTHO05D006377 2.2e-20 104.4 474 30.2
QL02p046697 Quercus lobata HOM05D006498 ORTHO05D006377 3.8e-20 103.6 54 87.0
Lsat_1_v5_gn_4_108221 Lactuca sativa HOM05D006498 ORTHO05D006377 5.5e-19 99.8 62 80.6
Lalb_Chr13g0299961 Lupinus albus HOM05D006498 ORTHO05D006377 1.8e-17 94.7 54 83.3
Actinidia30000 Actinidia chinensis HOM05D006498 ORTHO05D006377 3.9e-17 93.6 410 37.6
SHI03076 Sapria himalayana HOM05D006498 ORTHO05D006377 1.5e-16 91.7 54 79.6
Solyc09g055850.3 Solanum lycopersicum HOM05D006498 ORTHO05D006377 1.7e-15 88.2 53 77.4
QL02p046691 Quercus lobata HOM05D006498 ORTHO05D000004 1.0e-12 79.0 102 52.9
SGA_v2.0_scaffold95G28701 Striga asiatica HOM05D006498 ORTHO05D006377 1.1e-11 75.5 69 56.5
Cre06.g278258 Chlamydomonas reinhardtii HOM05D006498 ORTHO05D006377 8.2e-07 59.3 90 41.1
Sed0023288 Sechium edule HOM05D006498 ORTHO05D006377 3.1e-06 57.4 434 26.7
PRCOL_00004634 Prasinoderma coloniale HOM05D006498 ORTHO05D006377 4.1e-06 57.0 84 33.3


User provided reference genes

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