Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.1G071100 Prunus persica HOM05D006581 ORTHO05D007870 0.0e+00 1593.2 828 100.0
MD15G1394600 Malus domestica HOM05D006581 ORTHO05D007870 0.0e+00 1358.2 833 86.4
RcHm_v2.0_Chr4g0398711 Rosa chinensis HOM05D006581 ORTHO05D007870 0.0e+00 1357.0 829 85.4
FAN12G3574 Fragaria x ananassa HOM05D006581 ORTHO05D007870 0.0e+00 1330.9 830 83.5
FvH4_4g06790 Fragaria vesca HOM05D006581 ORTHO05D007870 0.0e+00 1330.5 830 83.6
FAN07G0243 Fragaria x ananassa HOM05D006581 ORTHO05D007870 0.0e+00 1190.3 830 76.9
Cfa012052 Carpinus fangiana HOM05D006581 ORTHO05D007870 0.0e+00 1151.0 829 72.3
Haze_09013 Corylus avellana HOM05D006581 ORTHO05D007870 0.0e+00 1151.0 829 72.9
QL12p015968 Quercus lobata HOM05D006581 ORTHO05D007870 0.0e+00 1129.8 828 72.1
CiPaw.08G049100 Carya illinoinensis HOM05D006581 ORTHO05D007870 0.0e+00 1108.2 829 71.0
GSVIVG01019912001 Vitis vinifera HOM05D006581 ORTHO05D007870 0.0e+00 1093.6 831 69.1
CANSAT78G1168 Cannabis sativa HOM05D006581 ORTHO05D007870 0.0e+00 1087.4 829 69.4
Atru.chr12.1085 Acer truncatum HOM05D006581 ORTHO05D007870 2.3e-311 1072.0 831 68.2
Potri.008G016000 Populus trichocarpa HOM05D006581 ORTHO05D007870 4.0e-311 1071.2 829 67.7
Ciclev10014277m.g Citrus clementina HOM05D006581 ORTHO05D007870 4.9e-306 1054.3 832 66.3
Sabra08G0009700 Salix brachista HOM05D006581 ORTHO05D007870 7.8e-304 1047.0 828 66.1
Actinidia27421 Actinidia chinensis HOM05D006581 ORTHO05D007870 2.4e-297 1025.4 830 66.4
Duzib128G1875 Durio zibethinus HOM05D006581 ORTHO05D007870 1.3e-295 1019.6 830 66.0
TWI38G0425 Tripterygium wilfordii HOM05D006581 ORTHO05D007870 6.2e-293 1010.7 834 65.2
Thecc.10G119000 Theobroma cacao HOM05D006581 ORTHO05D007870 1.2e-291 1006.5 834 64.5
Gohir.A06G170200 Gossypium hirsutum HOM05D006581 ORTHO05D007870 6.4e-290 1000.7 822 65.3
Gohir.D06G178000 Gossypium hirsutum HOM05D006581 ORTHO05D007870 8.4e-290 1000.3 822 65.3
Gorai.N007200 Gossypium raimondii HOM05D006581 ORTHO05D007870 8.4e-290 1000.3 822 65.3
Hma1.2p1_0017F.1_g011220 Hydrangea macrophylla HOM05D006581 ORTHO05D007870 1.4e-289 999.6 830 64.9
Lj8A253T47 Lonicera japonica HOM05D006581 ORTHO05D007870 2.5e-286 988.8 829 64.1
Cpa.g.sc33.130 Carica papaya HOM05D006581 ORTHO05D007870 6.2e-285 984.2 803 65.0
TAR629G0084 Trochodendron aralioides HOM05D006581 ORTHO05D007870 1.2e-283 979.9 831 64.4
Lalb_Chr01g0006991 Lupinus albus HOM05D006581 ORTHO05D007870 1.9e-281 972.6 829 62.2
Rhsim07G0097400 Rhododendron simsii HOM05D006581 ORTHO05D007870 1.9e-281 972.6 829 63.0
Oeu001905.1 Olea europaea HOM05D006581 ORTHO05D007870 2.4e-281 972.2 810 64.8
Nn3g19980 Nelumbo nucifera HOM05D006581 ORTHO05D007870 3.2e-281 971.8 829 63.0
Lj3g0012962 Lotus japonicus HOM05D006581 ORTHO05D007870 7.1e-281 970.7 830 62.4
FAN17G3070 Fragaria x ananassa HOM05D006581 ORTHO05D007870 6.0e-280 967.6 607 83.2
ClCG00G000120 Citrullus lanatus HOM05D006581 ORTHO05D007870 4.3e-278 961.4 846 60.2
ClCG10G003370 Citrullus lanatus HOM05D006581 ORTHO05D007870 1.6e-277 959.5 846 60.2
Sed0002136 Sechium edule HOM05D006581 ORTHO05D007870 3.7e-277 958.4 831 61.4
arahy.Tifrunner.gnm1.ann1.J373DC Arachis hypogaea HOM05D006581 ORTHO05D007870 3.5e-272 941.8 822 60.3
arahy.Tifrunner.gnm1.ann1.MU0C19 Arachis hypogaea HOM05D006581 ORTHO05D007870 6.7e-271 937.6 822 60.1
CsaV3_3G003400 Cucumis sativus L. HOM05D006581 ORTHO05D007870 1.5e-270 936.4 835 59.8
Cc03_g06340 Coffea canephora HOM05D006581 ORTHO05D007870 9.7e-270 933.7 829 60.7
Nitab4.5_0010186g0020 Nicotiana tabacum HOM05D006581 ORTHO05D007870 9.7e-270 933.7 830 60.1
MELO3C014006.2 Cucumis melo HOM05D006581 ORTHO05D007870 9.0e-268 927.2 831 59.2
Ca_14132_v3 Cicer arietinum L. HOM05D006581 ORTHO05D007870 1.7e-266 922.9 817 58.9
Peaxi162Scf00620g00237 Petunia axillaris HOM05D006581 ORTHO05D007870 3.8e-266 921.8 828 60.0
DCAR_000885 Daucus carota HOM05D006581 ORTHO05D007870 5.0e-266 921.4 800 62.9
Sopen08g028170 Solanum pennellii HOM05D006581 ORTHO05D007870 3.6e-264 915.2 830 59.2
Solyc08g079810.4 Solanum lycopersicum HOM05D006581 ORTHO05D007870 7.9e-264 914.1 830 58.8
Manes.10G064500 Manihot esculenta HOM05D006581 ORTHO05D007870 1.8e-263 912.9 825 61.0
PGSC0003DMG400003942 Solanum tuberosum HOM05D006581 ORTHO05D007870 3.0e-263 912.1 830 58.7
Nitab4.5_0005167g0030 Nicotiana tabacum HOM05D006581 ORTHO05D007870 1.3e-261 906.7 830 59.2
Aqoxy7G00548 Aquilegia oxysepala HOM05D006581 ORTHO05D007870 9.1e-260 900.6 829 57.9
Migut.E01071 Erythranthe guttata HOM05D006581 ORTHO05D007870 9.1e-260 900.6 833 60.0
Hund14684 Selenicereus undatus HOM05D006581 ORTHO05D007870 2.0e-259 899.4 832 58.7
Medtr3g010350 Medicago truncatula HOM05D006581 ORTHO05D007870 6.5e-258 894.4 834 57.7
TPR.G5149 Trifolium pratense HOM05D006581 ORTHO05D007870 8.5e-258 894.0 825 57.5
ClCG00G004880 Citrullus lanatus HOM05D006581 ORTHO05D007870 1.9e-257 892.9 780 60.4
ECA233G4444 Erigeron canadensis HOM05D006581 ORTHO05D007870 3.0e-255 885.6 799 59.6
Lsat_1_v5_gn_8_138880 Lactuca sativa HOM05D006581 ORTHO05D007870 8.8e-255 884.0 805 60.0
Psat7g256920 Pisum sativum HOM05D006581 ORTHO05D007870 2.6e-254 882.5 832 57.0
EL10Ac5g12666 Beta vulgaris HOM05D006581 ORTHO05D007870 1.7e-253 879.8 809 58.7
PSO782G3179 Papaver somniferum HOM05D006581 ORTHO05D007870 4.1e-252 875.2 835 57.2
PSO478G1557 Papaver somniferum HOM05D006581 ORTHO05D007870 3.4e-251 872.1 835 57.5
COL.COLO4_10009 Corchorus olitorius HOM05D006581 ORTHO05D007870 1.7e-245 853.2 837 57.9
THA.LOC104812128 Tarenaya hassleriana HOM05D006581 ORTHO05D007870 2.8e-245 852.4 824 56.7
SGA_v2.0_scaffold196G40922 Striga asiatica HOM05D006581 ORTHO05D007870 9.1e-244 847.4 794 57.2
Ah.02g116280 Amaranthus hybridus HOM05D006581 ORTHO05D007870 2.6e-243 845.9 816 57.1
Thhalv10018136m.g Eutrema salsugineum HOM05D006581 ORTHO05D007870 3.5e-243 845.5 815 56.3
Aa31LG4G4270 Aethionema arabicum HOM05D006581 ORTHO05D007870 1.0e-239 833.9 821 54.8
AT1G73970 Arabidopsis thaliana HOM05D006581 ORTHO05D007870 8.8e-239 830.9 814 55.4
AL2G33810 Arabidopsis lyrata HOM05D006581 ORTHO05D007870 1.5e-238 830.1 815 55.6
CARHR067090 Cardamine hirsuta HOM05D006581 ORTHO05D007870 2.6e-238 829.3 801 56.8
Sp5g29170 Schrenkiella parvula HOM05D006581 ORTHO05D007870 1.8e-236 823.2 815 55.3
Lj8C252T14 Lonicera japonica HOM05D006581 ORTHO05D007870 2.0e-235 819.7 829 56.0
MBI12_g26094_MAGBIO Magnolia biondii HOM05D006581 ORTHO05D007870 1.0e-234 817.4 804 56.7
BraA07t31529Z Brassica rapa HOM05D006581 ORTHO05D007870 1.3e-234 817.0 801 56.1
A07p39830 Brassica napus HOM05D006581 ORTHO05D007870 2.2e-234 816.2 813 55.4
Glyma.06G323200 Glycine max HOM05D006581 ORTHO05D007870 1.9e-233 813.1 839 54.9
Carub.0002s2075 Capsella rubella HOM05D006581 ORTHO05D007870 7.2e-233 811.2 814 54.2
C06p48090 Brassica napus HOM05D003462 ORTHO05D007870 4.7e-232 808.5 804 56.3
BolC6t39844H Brassica oleracea HOM05D006581 ORTHO05D007870 5.2e-231 805.1 803 56.2
HanXRQChr04g0124681 Helianthus annuus HOM05D006581 ORTHO05D007870 1.7e-229 800.0 744 58.9
AUR62004835 Chenopodium quinoa HOM05D006581 ORTHO05D007870 2.2e-229 799.7 742 58.4
AUR62040923 Chenopodium quinoa HOM05D006581 ORTHO05D007870 2.8e-229 799.3 742 58.6
Phvul.005G003000 Phaseolus vulgaris HOM05D006581 ORTHO05D007870 3.1e-228 795.8 836 53.7
VMungo1080G1314 Vigna mungo HOM05D006581 ORTHO05D007870 3.3e-225 785.8 811 54.4
BcaC08g46826 Brassica carinata HOM05D006581 ORTHO05D007870 2.0e-222 776.5 818 53.7
Dinv39047 Davidia involucrata HOM05D006581 ORTHO05D007870 2.6e-222 776.2 653 64.5
SHI19174 Sapria himalayana HOM05D006581 ORTHO05D007870 1.2e-214 750.7 828 50.2
Dinv37725 Davidia involucrata HOM05D006581 ORTHO05D007870 2.0e-214 750.0 613 65.4
SalBow7G1099 Salvia bowleyana HOM05D006581 ORTHO05D007870 2.0e-211 740.0 797 53.1
unitig_26.g9687 Utricularia gibba HOM05D006581 ORTHO05D007870 5.8e-206 721.8 822 49.4
Hma1.2p1_0017F.1_g011230 Hydrangea macrophylla HOM05D006581 ORTHO05D007870 2.2e-181 640.2 553 62.9
ATR0757G052 Amborella trichopoda HOM05D006581 ORTHO05D007870 7.1e-180 635.2 825 45.2
MBI12_g05899_MAGBIO Magnolia biondii HOM05D006581 ORTHO05D007870 3.3e-177 626.3 737 50.9
CDE05G1723 Ceratophyllum demersum HOM05D006581 ORTHO05D007870 4.8e-176 622.5 806 45.5
Sc01g0009010 Simmondsia chinensis HOM05D006581 ORTHO05D007870 5.8e-174 615.5 609 55.0
Eucgr.E00519 Eucalyptus grandis HOM05D006581 ORTHO05D007870 1.3e-165 587.8 563 55.8
CSS0016486 Camellia sinensis var. sinensis HOM05D006581 ORTHO05D007870 7.6e-158 562.0 484 64.5
vmacro14025 Vaccinium macrocarpon HOM05D006581 ORTHO05D007870 1.2e-155 554.7 425 68.0
Medtr4g059740 Medicago truncatula HOM05D006581 ORTHO05D007870 6.9e-143 512.3 583 49.9
Zm00001eb230550 Zea mays HOM05D006581 ORTHO05D007870 1.5e-137 494.6 776 39.6
Hma1.2p1_0138F.1_g062900 Hydrangea macrophylla HOM05D006581 ORTHO05D007870 2.8e-136 490.3 784 43.4
Ciclev10017584m.g Citrus clementina HOM05D006581 ORTHO05D007870 3.8e-133 479.9 354 70.1
Ciclev10006485m.g Citrus clementina HOM05D006581 ORTHO05D007870 1.2e-113 415.2 318 68.2
Mapoly0035s0119 Marchantia polymorpha HOM05D006581 ORTHO05D007870 2.1e-99 367.9 917 32.6
Ciclev10006576m.g Citrus clementina HOM05D006581 ORTHO05D007870 4.7e-99 366.7 316 62.7
CSS0046982 Camellia sinensis var. sinensis HOM05D006581 ORTHO05D007870 1.5e-97 361.7 487 50.1
Migut.J01229 Erythranthe guttata HOM05D006581 ORTHO05D007870 4.1e-95 353.6 264 68.6
Pp3c5_4510 Physcomitrium patens HOM05D006581 ORTHO05D007870 2.5e-84 317.8 892 29.8
CSS0026570 Camellia sinensis var. sinensis HOM05D006581 ORTHO05D007870 7.3e-84 316.2 224 72.8
Eucgr.E00518 Eucalyptus grandis HOM05D006581 ORTHO05D007870 6.6e-77 293.1 200 72.5
SMO118G0399 Selaginella moellendorffii HOM05D006581 ORTHO05D007870 1.6e-67 261.9 814 28.7
SEGI_20261 Sequoiadendron giganteum HOM05D006581 ORTHO05D007870 2.7e-62 244.6 263 51.0
Os02g0123400 Oryza sativa ssp. japonica HOM05D006581 ORTHO05D007870 1.2e-57 229.2 522 32.0
AagrBONN_evm.TU.Sc2ySwM_228.3501 Anthoceros agrestis HOM05D006581 ORTHO05D007870 7.4e-52 209.9 538 28.4
SEGI_01852 Sequoiadendron giganteum HOM05D006581 ORTHO05D007870 3.7e-51 207.6 582 31.4
CSS0037330 Camellia sinensis var. sinensis HOM05D006581 ORTHO05D007870 8.1e-51 206.5 224 52.2
Sabra10G0190600 Salix brachista HOM05D006581 ORTHO05D007870 1.1e-26 126.3 215 43.7
Lj8P252T34 Lonicera japonica HOM05D006581 ORTHO05D007870 5.1e-21 107.5 71 74.6
CBR_g52136 Chara braunii HOM05D006581 ORTHO05D007870 5.0e-16 90.9 452 23.9


User provided reference genes

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