Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.1G070600 Prunus persica HOM05D007563 ORTHO05D009546 1.9e-101 372.5 184 100.0
MD16G1243400 Malus domestica HOM05D007563 ORTHO05D009546 1.2e-71 273.5 157 84.7
FAN12G1059 Fragaria x ananassa HOM05D007563 ORTHO05D009546 3.3e-69 265.4 162 78.4
RcHm_v2.0_Chr4g0398681 Rosa chinensis HOM05D007563 ORTHO05D009546 7.3e-69 264.2 162 80.2
FvH4_4g06750 Fragaria vesca HOM05D007563 ORTHO05D009546 1.6e-68 263.1 162 77.8
Thecc.02G156900 Theobroma cacao HOM05D007563 ORTHO05D009546 3.9e-62 241.9 167 70.1
TAR622G0982 Trochodendron aralioides HOM05D007563 ORTHO05D009546 1.9e-61 239.6 157 72.6
Potri.005G090400 Populus trichocarpa HOM05D007563 ORTHO05D009546 1.1e-59 233.8 161 67.7
Duzib248G0691 Durio zibethinus HOM05D007563 ORTHO05D009546 2.4e-59 232.6 177 66.1
GSVIVG01026146001 Vitis vinifera HOM05D007563 ORTHO05D009546 3.1e-59 232.3 150 73.3
Cfa008765 Carpinus fangiana HOM05D007563 ORTHO05D009546 5.3e-59 231.5 163 68.7
Nn3g18621 Nelumbo nucifera HOM05D007563 ORTHO05D009546 3.4e-58 228.8 171 67.3
Hma1.2p1_0513F.1_g169460 Hydrangea macrophylla HOM05D007563 ORTHO05D009546 4.9e-57 224.9 163 69.3
Gorai.013G068700 Gossypium raimondii HOM05D007563 ORTHO05D009546 1.4e-56 223.4 159 69.2
Ciclev10032938m.g Citrus clementina HOM05D007563 ORTHO05D009546 4.2e-56 221.9 165 70.3
Gohir.A13G061300 Gossypium hirsutum HOM05D007563 ORTHO05D009546 4.2e-56 221.9 159 68.6
Glyma.10G285700 Glycine max HOM05D007563 ORTHO05D009546 5.4e-56 221.5 164 67.7
Gohir.D13G060600 Gossypium hirsutum HOM05D007563 ORTHO05D009546 5.4e-56 221.5 159 68.6
COL.COLO4_33083 Corchorus olitorius HOM05D007563 ORTHO05D009546 2.1e-55 219.5 142 72.5
Nitab4.5_0000069g0150 Nicotiana tabacum HOM05D007563 ORTHO05D009546 2.1e-55 219.5 169 64.5
PGSC0003DMG400016398 Solanum tuberosum HOM05D007563 ORTHO05D009546 2.7e-55 219.2 166 64.5
Eucgr.J00882 Eucalyptus grandis HOM05D007563 ORTHO05D009546 3.5e-55 218.8 161 64.6
Sopen01g003780 Solanum pennellii HOM05D007563 ORTHO05D009546 4.6e-55 218.4 165 65.5
Solyc01g008260.4 Solanum lycopersicum HOM05D007563 ORTHO05D009546 1.3e-54 216.9 178 61.2
THA.LOC104818377 Tarenaya hassleriana HOM05D007563 ORTHO05D009546 1.3e-54 216.9 170 63.5
CAN.G282.47 Capsicum annuum HOM05D007563 ORTHO05D009546 1.7e-54 216.5 167 64.7
Nitab4.5_0002387g0070 Nicotiana tabacum HOM05D007563 ORTHO05D009546 3.0e-54 215.7 149 69.1
VMungo0720G1614 Vigna mungo HOM05D007563 ORTHO05D009546 3.0e-54 215.7 164 63.4
Lj3A848G48 Lonicera japonica HOM05D007563 ORTHO05D009546 5.1e-54 214.9 167 62.9
PGR044G2202 Punica granatum HOM05D007563 ORTHO05D009546 8.7e-54 214.2 171 60.8
arahy.Tifrunner.gnm1.ann1.B4R3WF Arachis hypogaea HOM05D007563 ORTHO05D009546 1.1e-53 213.8 163 68.1
Phvul.007G015100 Phaseolus vulgaris HOM05D007563 ORTHO05D009546 2.5e-53 212.6 162 64.2
Atru.chr11.1116 Acer truncatum HOM05D007563 ORTHO05D009546 3.3e-53 212.2 163 65.6
Rhsim09G0069800 Rhododendron simsii HOM05D007563 ORTHO05D009546 3.3e-53 212.2 171 60.2
arahy.Tifrunner.gnm1.ann1.02I6X5 Arachis hypogaea HOM05D007563 ORTHO05D009546 4.3e-53 211.8 163 67.5
CANSAT78G0704 Cannabis sativa HOM05D007563 ORTHO05D009546 7.3e-53 211.1 170 62.9
Lalb_Chr06g0163901 Lupinus albus HOM05D007563 ORTHO05D009546 7.3e-53 211.1 161 64.0
TPR.G4067 Trifolium pratense HOM05D007563 ORTHO05D009546 7.3e-53 211.1 152 67.1
TWI53G1187 Tripterygium wilfordii HOM05D007563 ORTHO05D009546 9.6e-53 210.7 161 65.2
Hund24382 Selenicereus undatus HOM05D007563 ORTHO05D009546 1.3e-52 210.3 160 66.2
AT5G08320 Arabidopsis thaliana HOM05D007563 ORTHO05D009546 2.1e-52 209.5 149 65.1
Ca_11254_v3 Cicer arietinum L. HOM05D007563 ORTHO05D009546 2.1e-52 209.5 152 66.4
Peaxi162Scf00021g02222 Petunia axillaris HOM05D007563 ORTHO05D009546 2.1e-52 209.5 141 71.6
Psat6g233640 Pisum sativum HOM05D007563 ORTHO05D009546 6.2e-52 208.0 158 64.6
Aa31LG3G18250 Aethionema arabicum HOM05D007563 ORTHO05D009546 1.1e-51 207.2 147 65.3
AL6G18750 Arabidopsis lyrata HOM05D007563 ORTHO05D009546 1.1e-51 207.2 149 64.4
CSS0014548 Camellia sinensis var. sinensis HOM05D007563 ORTHO05D009546 1.1e-51 207.2 174 63.8
QL03p034961 Quercus lobata HOM05D007563 ORTHO05D009546 1.1e-51 207.2 175 62.3
Haze_11776 Corylus avellana HOM05D007563 ORTHO05D009546 1.8e-51 206.5 214 51.9
PSO017G0076 Papaver somniferum HOM05D007563 ORTHO05D009546 1.8e-51 206.5 146 68.5
Sp6g34630 Schrenkiella parvula HOM05D007563 ORTHO05D009546 1.8e-51 206.5 147 66.7
C02p03530 Brassica napus HOM05D007563 ORTHO05D009546 3.1e-51 205.7 147 66.0
BolC2t06312H Brassica oleracea HOM05D007563 ORTHO05D009546 3.1e-51 205.7 147 66.0
Lj5g0022450 Lotus japonicus HOM05D007563 ORTHO05D009546 4.0e-51 205.3 158 63.3
Thhalv10014924m.g Eutrema salsugineum HOM05D007563 ORTHO05D009546 6.9e-51 204.5 147 64.6
PSO478G0646 Papaver somniferum HOM05D007563 ORTHO05D009546 9.0e-51 204.1 196 56.6
Medtr1g114370 Medicago truncatula HOM05D007563 ORTHO05D009546 1.5e-50 203.4 163 64.4
CARHR204780 Cardamine hirsuta HOM05D007563 ORTHO05D009546 2.6e-50 202.6 147 65.3
Carub.0006s0721 Capsella rubella HOM05D007563 ORTHO05D009546 3.4e-50 202.2 147 64.6
Sc21g0003780 Simmondsia chinensis HOM05D007563 ORTHO05D009546 4.5e-50 201.8 149 63.8
DCAR_026884 Daucus carota HOM05D007563 ORTHO05D009546 9.9e-50 200.7 138 71.0
CiPaw.05G170900 Carya illinoinensis HOM05D007563 ORTHO05D009546 1.7e-49 199.9 142 69.7
vmacro15986 Vaccinium macrocarpon HOM05D007563 ORTHO05D009546 4.9e-49 198.4 139 67.6
EL10Ac9g22975 Beta vulgaris HOM05D007563 ORTHO05D009546 1.6e-47 193.4 158 61.4
BraA02t04951Z Brassica rapa HOM05D007563 ORTHO05D009546 2.1e-47 193.0 140 64.3
Nitab4.5_0000069g0170 Nicotiana tabacum HOM05D007563 ORTHO05D009546 2.7e-47 192.6 139 67.6
Oeu013196.2 Olea europaea HOM05D007563 ORTHO05D009546 3.5e-47 192.2 196 53.6
Os02g0635700 Oryza sativa ssp. japonica HOM05D007563 ORTHO05D009546 4.6e-47 191.8 175 56.6
MSTRG.8089 Avicennia marina HOM05D007563 ORTHO05D009546 6.0e-47 191.4 163 61.3
MBI03_g13825_MAGBIO Magnolia biondii HOM05D007563 ORTHO05D009546 2.3e-46 189.5 154 59.7
unitig_22.g6356 Utricularia gibba HOM05D007563 ORTHO05D009546 3.9e-46 188.7 153 62.7
ECA234G0294 Erigeron canadensis HOM05D007563 ORTHO05D009546 1.5e-45 186.8 139 64.0
HanXRQChr16g0528531 Helianthus annuus HOM05D007563 ORTHO05D009546 1.5e-45 186.8 180 55.6
Zm00001eb248280 Zea mays HOM05D007563 ORTHO05D009546 1.5e-45 186.8 181 53.6
Aqoxy2G00835 Aquilegia oxysepala HOM05D007563 ORTHO05D009546 3.3e-45 185.7 151 62.9
AUR62017724 Chenopodium quinoa HOM05D007563 ORTHO05D009546 7.4e-45 184.5 141 63.1
Lsat_1_v5_gn_4_64620 Lactuca sativa HOM05D007563 ORTHO05D009546 3.7e-44 182.2 138 62.3
CDE04G1527 Ceratophyllum demersum HOM05D007563 ORTHO05D009546 6.2e-44 181.4 162 55.6
SEGI_01872 Sequoiadendron giganteum HOM05D007563 ORTHO05D009546 1.4e-43 180.3 180 53.9
AUR62032956 Chenopodium quinoa HOM05D007563 ORTHO05D009546 2.4e-43 179.5 143 61.5
HPP92_005058 Vanilla planifolia HOM05D007563 ORTHO05D009546 5.3e-43 178.3 175 53.1
ATR0618G415 Amborella trichopoda HOM05D007563 ORTHO05D009546 3.4e-42 175.6 144 58.3
Sabra05G0074500 Salix brachista HOM05D007563 ORTHO05D009546 6.5e-41 171.4 173 50.9
SMO201G0195 Selaginella moellendorffii HOM05D007563 ORTHO05D009546 1.0e-33 147.5 131 57.3
BcaC03g13222 Brassica carinata HOM05D007563 ORTHO05D009546 4.6e-31 138.7 109 57.8
Mapoly0067s0084 Marchantia polymorpha HOM05D007563 ORTHO05D009546 2.2e-28 129.8 168 41.7
Cre01.g041351 Chlamydomonas reinhardtii HOM05D007563 ORTHO05D009546 7.7e-26 121.3 142 45.1
Cc00_g07880 Coffea canephora HOM05D007563 ORTHO05D009546 1.7e-25 120.2 65 84.6
Pp3c13_24580 Physcomitrium patens HOM05D007563 ORTHO05D009546 1.1e-24 117.5 176 39.8
AagrBONN_evm.TU.Sc2ySwM_368.3197 Anthoceros agrestis HOM05D007563 ORTHO05D009546 7.2e-24 114.8 124 47.6
Migut.L00866 Erythranthe guttata HOM05D007563 ORTHO05D009546 1.7e-17 93.6 97 51.5
Duzib132G1246 Durio zibethinus HOM05D007563 ORTHO05D009546 3.8e-17 92.4 76 56.6
Duzib132G0714 Durio zibethinus HOM05D007563 ORTHO05D009546 3.2e-16 89.4 76 55.3
Migut.O00860 Erythranthe guttata HOM05D007563 ORTHO05D009546 1.2e-15 87.4 71 63.4
PRCOL_00006925 Prasinoderma coloniale HOM05D007563 ORTHO05D009546 6.7e-14 81.6 104 40.4
MCO14G254 Micromonas commoda HOM05D007563 ORTHO05D009546 3.7e-12 75.9 59 57.6
CBR_g24157 Chara braunii HOM05D007563 ORTHO05D009546 7.7e-10 68.2 64 51.6
Lj5g0009856 Lotus japonicus HOM05D007563 ORTHO05D009546 9.4e-08 61.2 72 43.1


User provided reference genes

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