Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.1G069600 Prunus persica HOM05D002570 ORTHO05D002689 1.7e-84 316.2 188 100.0
FvH4_4g06680 Fragaria vesca HOM05D030384 ORTHO05D002689 2.1e-23 113.2 99 63.6
FAN12G3444 Fragaria x ananassa HOM05D030384 ORTHO05D002689 2.1e-23 113.2 99 63.6
FAN22G1225 Fragaria x ananassa HOM05D002570 ORTHO05D002689 1.2e-18 97.4 61 82.0
FAN17G2389 Fragaria x ananassa HOM05D030384 ORTHO05D002689 3.1e-14 82.8 81 55.6
arahy.Tifrunner.gnm1.ann1.ANT7GU Arachis hypogaea HOM05D002570 ORTHO05D002689 4.5e-13 79.0 61 63.9
arahy.Tifrunner.gnm1.ann1.G00P8D Arachis hypogaea HOM05D002570 ORTHO05D002689 7.6e-13 78.2 63 63.5
Cfa013397 Carpinus fangiana HOM05D002570 ORTHO05D002689 7.6e-13 78.2 82 48.8
Dinv25488 Davidia involucrata HOM05D002570 ORTHO05D002689 6.4e-12 75.1 67 53.7
Duzib251G0386 Durio zibethinus HOM05D002570 ORTHO05D002689 1.4e-11 73.9 102 41.2
Psat4g014680 Pisum sativum HOM05D002570 ORTHO05D002689 3.2e-11 72.8 72 52.8
TPR.G27566 Trifolium pratense HOM05D002570 ORTHO05D002689 5.4e-11 72.0 113 41.6
Lj4g0013925 Lotus japonicus HOM05D002570 ORTHO05D002689 1.2e-10 70.9 115 39.1
Potri.006G070200 Populus trichocarpa HOM05D002570 ORTHO05D002689 2.1e-10 70.1 102 38.2
Sabra06G0052300 Salix brachista HOM05D002570 ORTHO05D002689 3.5e-10 69.3 70 45.7
VMungo1215G3302 Vigna mungo HOM05D002570 ORTHO05D002689 7.9e-10 68.2 113 34.5
Ciclev10010203m.g Citrus clementina HOM05D002570 ORTHO05D002689 1.3e-09 67.4 67 47.8
Potri.018G131900 Populus trichocarpa HOM05D002570 ORTHO05D002689 1.3e-09 67.4 67 46.3
Lalb_Chr12g0199761 Lupinus albus HOM05D002570 ORTHO05D002689 2.3e-09 66.6 73 49.3
Medtr4g126400 Medicago truncatula HOM05D002570 ORTHO05D002689 8.7e-09 64.7 75 48.0
Phvul.003G137400 Phaseolus vulgaris HOM05D002570 ORTHO05D002689 1.9e-08 63.5 79 45.6
Gohir.A12G155900 Gossypium hirsutum HOM05D002570 ORTHO05D002689 3.3e-08 62.8 69 47.8
Gohir.D12G159000 Gossypium hirsutum HOM05D002570 ORTHO05D002689 4.3e-08 62.4 65 49.2
Glyma.13G371800 Glycine max HOM05D002570 ORTHO05D002689 5.6e-08 62.0 99 39.4
Dinv13685 Davidia involucrata HOM05D002570 ORTHO05D002689 9.6e-08 61.2 107 34.6
Dinv21443 Davidia involucrata HOM05D002570 ORTHO05D002689 9.6e-08 61.2 107 34.6
Glyma.15G001900 Glycine max HOM05D002570 ORTHO05D002689 9.6e-08 61.2 99 38.4
Hma1.2p1_1208F.1_g267175 Hydrangea macrophylla HOM05D002570 ORTHO05D002689 9.6e-08 61.2 107 34.6
Migut.D01154 Erythranthe guttata HOM05D002570 ORTHO05D002689 1.3e-07 60.8 105 35.2
vmacro19088 Vaccinium macrocarpon HOM05D002570 ORTHO05D002689 1.3e-07 60.8 107 33.6
Gorai.008G172100 Gossypium raimondii HOM05D002570 ORTHO05D002689 1.6e-07 60.5 65 49.2
Actinidia08926 Actinidia chinensis HOM05D002570 ORTHO05D002689 2.1e-07 60.1 110 31.8
Manes.11G071400 Manihot esculenta HOM05D002570 ORTHO05D002689 2.1e-07 60.1 107 34.6
COL.COLO4_30895 Corchorus olitorius HOM05D002570 ORTHO05D002689 2.8e-07 59.7 109 33.9
Oeu012866.1 Olea europaea HOM05D002570 ORTHO05D002689 4.8e-07 58.9 109 33.0
Rhsim08G0200900 Rhododendron simsii HOM05D002570 ORTHO05D002689 4.8e-07 58.9 69 44.9
SalBow1G2645 Salvia bowleyana HOM05D002570 ORTHO05D002689 4.8e-07 58.9 106 34.0
Thecc.06G132900 Theobroma cacao HOM05D002570 ORTHO05D002689 4.8e-07 58.9 109 33.9
TAR383G0799 Trochodendron aralioides HOM05D002570 ORTHO05D002689 4.8e-07 58.9 96 35.4
PGR102G1262 Punica granatum HOM05D002570 ORTHO05D002689 6.2e-07 58.5 106 34.9
Peaxi162Scf00314g00938 Petunia axillaris HOM05D002570 ORTHO05D002689 8.1e-07 58.2 106 33.0
Thecc.02G311400 Theobroma cacao HOM05D002570 ORTHO05D002689 8.1e-07 58.2 59 50.8
CANSAT64G2315 Cannabis sativa HOM05D002570 ORTHO05D002689 1.1e-06 57.8 69 49.3
Cc04_g05480 Coffea canephora HOM05D002570 ORTHO05D002689 1.1e-06 57.8 106 33.0
Duzib192G0671 Durio zibethinus HOM05D002570 ORTHO05D002689 1.1e-06 57.8 99 36.4
HanXRQChr02g0033781 Helianthus annuus HOM05D002570 ORTHO05D002689 1.1e-06 57.8 69 44.9
Phvul.005G184200 Phaseolus vulgaris HOM05D002570 ORTHO05D002689 1.1e-06 57.8 98 34.7
CSS0011601 Camellia sinensis var. sinensis HOM05D002570 ORTHO05D002689 1.4e-06 57.4 110 30.0
CSS0038527 Camellia sinensis var. sinensis HOM05D002570 ORTHO05D002689 1.4e-06 57.4 110 30.0
Lsat_1_v5_gn_1_30640 Lactuca sativa HOM05D002570 ORTHO05D002689 1.4e-06 57.4 69 43.5
MBI14_g19442_MAGBIO Magnolia biondii HOM05D002570 ORTHO05D002689 1.4e-06 57.4 70 42.9
unitig_22.g6281 Utricularia gibba HOM05D002570 ORTHO05D002689 1.4e-06 57.4 110 35.5
CiPaw.01G051100 Carya illinoinensis HOM05D002570 ORTHO05D002689 1.8e-06 57.0 96 35.4
Glyma.17G055600 Glycine max HOM05D002570 ORTHO05D002689 1.8e-06 57.0 110 38.2
Actinidia18273 Actinidia chinensis HOM05D002570 ORTHO05D002689 2.4e-06 56.6 107 30.8
MBI16_g27293_MAGBIO Magnolia biondii HOM05D002570 ORTHO05D002689 2.4e-06 56.6 76 39.5
MSTRG.22832 Avicennia marina HOM05D002570 ORTHO05D002689 3.1e-06 56.2 69 44.9
Eucgr.J03139 Eucalyptus grandis HOM05D002570 ORTHO05D002689 4.0e-06 55.8 107 34.6
HanXRQChr04g0099961 Helianthus annuus HOM05D002570 ORTHO05D002689 4.0e-06 55.8 59 47.5
Potri.001G037400 Populus trichocarpa HOM05D002570 ORTHO05D002689 4.0e-06 55.8 97 35.1
Solyc03g117840.4 Solanum lycopersicum HOM05D002570 ORTHO05D002689 4.0e-06 55.8 108 31.5
PGSC0003DMG400014220 Solanum tuberosum HOM05D002570 ORTHO05D002689 4.0e-06 55.8 108 31.5
Zm00001eb067680 Zea mays HOM05D002570 ORTHO05D002689 4.0e-06 55.8 72 41.7
Nn8g40408 Nelumbo nucifera HOM05D002570 ORTHO05D002689 5.3e-06 55.5 113 32.7
Potri.003G187500 Populus trichocarpa HOM05D002570 ORTHO05D002689 5.3e-06 55.5 97 34.0
Sopen03g036750 Solanum pennellii HOM05D002570 ORTHO05D002689 5.3e-06 55.5 108 31.5
Glyma.13G103400 Glycine max HOM05D002570 ORTHO05D002689 6.9e-06 55.1 117 34.2
Sabra03G0137200 Salix brachista HOM05D002570 ORTHO05D002689 6.9e-06 55.1 97 34.0
CAN.G1008.23 Capsicum annuum HOM05D002570 ORTHO05D002689 9.0e-06 54.7 68 44.1
Lj3g0010275 Lotus japonicus HOM05D002570 ORTHO05D002689 9.0e-06 54.7 96 35.4
Nitab4.5_0004194g0090 Nicotiana tabacum HOM05D002570 ORTHO05D002689 9.0e-06 54.7 108 30.6
Nitab4.5_0007293g0020 Nicotiana tabacum HOM05D002570 ORTHO05D002689 9.0e-06 54.7 108 30.6
QL05p081283 Quercus lobata HOM05D002570 ORTHO05D002689 9.0e-06 54.7 96 34.4


User provided reference genes

Program Settings