Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.1G068100 Prunus persica HOM05D007669 ORTHO05D009624 0.0e+00 1253.0 616 100.0
MD13G1236300 Malus domestica HOM05D007669 ORTHO05D009624 3.7e-290 1001.1 614 79.5
RcHm_v2.0_Chr4g0398451 Rosa chinensis HOM05D007669 ORTHO05D009624 7.4e-267 923.7 615 73.3
FAN17G0559 Fragaria x ananassa HOM05D007669 ORTHO05D009624 3.7e-250 868.2 614 69.9
FAN22G2123 Fragaria x ananassa HOM05D007669 ORTHO05D009624 7.7e-248 860.5 605 68.9
FAN07G2841 Fragaria x ananassa HOM05D007669 ORTHO05D009624 1.5e-246 856.3 605 68.8
FvH4_4g06530 Fragaria vesca HOM05D007669 ORTHO05D009624 1.3e-226 790.0 554 69.7
Cfa013482 Carpinus fangiana HOM05D007669 ORTHO05D009624 7.3e-222 774.2 604 62.6
QL11p009976 Quercus lobata HOM05D007669 ORTHO05D009624 1.1e-206 723.8 602 60.0
Dinv25484 Davidia involucrata HOM05D007669 ORTHO05D009624 1.0e-199 700.7 615 57.2
GSVIVG01029262001 Vitis vinifera HOM05D007669 ORTHO05D009624 3.2e-193 679.1 606 57.3
Potri.018G133300 Populus trichocarpa HOM05D007669 ORTHO05D009624 1.6e-192 676.8 602 55.3
Ciclev10007518m.g Citrus clementina HOM05D007669 ORTHO05D009624 2.1e-192 676.4 596 56.5
Gorai.009G262500 Gossypium raimondii HOM05D007669 ORTHO05D009624 6.0e-192 674.9 615 54.5
Gohir.D05G246300 Gossypium hirsutum HOM05D007669 ORTHO05D009624 2.3e-191 672.9 615 54.1
Gohir.A05G248100 Gossypium hirsutum HOM05D007669 ORTHO05D009624 4.8e-189 665.2 615 54.3
Sabra18G0113000 Salix brachista HOM05D007669 ORTHO05D009624 8.1e-189 664.5 604 54.3
TWI34G1867 Tripterygium wilfordii HOM05D007669 ORTHO05D009624 1.8e-188 663.3 615 53.8
CANSAT11G2077 Cannabis sativa HOM05D007669 ORTHO05D009624 3.3e-182 642.5 596 56.0
Duzib177G0349 Durio zibethinus HOM05D007669 ORTHO05D009624 1.3e-181 640.6 571 55.7
Sed0018351 Sechium edule HOM05D007669 ORTHO05D009624 2.8e-181 639.4 598 54.5
arahy.Tifrunner.gnm1.ann1.BQQL35 Arachis hypogaea HOM05D007669 ORTHO05D009624 5.8e-179 631.7 614 53.1
Manes.14G174400 Manihot esculenta HOM05D007669 ORTHO05D009624 5.8e-179 631.7 611 52.0
Lj4g0015120 Lotus japonicus HOM05D007669 ORTHO05D009624 1.3e-178 630.6 608 52.5
Lalb_Chr07g0180781 Lupinus albus HOM05D007669 ORTHO05D009624 5.5e-177 625.2 614 52.3
ClCG06G013870 Citrullus lanatus HOM05D007669 ORTHO05D009624 3.0e-175 619.4 614 52.6
arahy.Tifrunner.gnm1.ann1.YI9GDS Arachis hypogaea HOM05D007669 ORTHO05D009624 6.7e-175 618.2 606 52.5
Medtr4g126780 Medicago truncatula HOM05D007669 ORTHO05D009624 9.0e-172 607.8 613 49.9
TPR.G5403 Trifolium pratense HOM05D007669 ORTHO05D009624 9.0e-172 607.8 612 50.5
Phvul.003G138500 Phaseolus vulgaris HOM05D007669 ORTHO05D009624 1.0e-170 604.4 602 51.0
Rhsim01G0007900 Rhododendron simsii HOM05D007669 ORTHO05D009624 6.7e-167 591.7 617 50.1
Ca_21270_v3 Cicer arietinum L. HOM05D007669 ORTHO05D009624 1.8e-164 583.6 670 46.4
PGR044G0001 Punica granatum HOM05D007669 ORTHO05D009624 2.4e-164 583.2 596 49.8
Oeu025206.1 Olea europaea HOM05D007669 ORTHO05D009624 1.2e-163 580.9 619 48.6
Lj2g0020468 Lotus japonicus HOM05D007669 ORTHO05D009624 9.7e-158 561.2 609 49.6
Cc06_g12900 Coffea canephora HOM05D007669 ORTHO05D009624 5.3e-156 555.4 613 48.5
CiPaw.08G030700 Carya illinoinensis HOM05D007669 ORTHO05D009624 4.2e-153 545.8 414 64.0
Nn8g40420 Nelumbo nucifera HOM05D007669 ORTHO05D009624 1.6e-152 543.9 623 47.7
HanXRQChr09g0244441 Helianthus annuus HOM05D007669 ORTHO05D009624 1.1e-145 521.2 613 45.0
MELO3C017409.2 Cucumis melo HOM05D007669 ORTHO05D009624 3.2e-145 519.6 573 48.7
Cpa.g.sc115.51 Carica papaya HOM05D007669 ORTHO05D009624 4.2e-145 519.2 543 48.6
PSO170G1866 Papaver somniferum HOM05D007669 ORTHO05D009624 8.0e-144 515.0 602 47.3
SalBow1G4073 Salvia bowleyana HOM05D007669 ORTHO05D009624 1.0e-143 514.6 610 44.4
PSO063G2993 Papaver somniferum HOM05D007669 ORTHO05D009624 1.4e-143 514.2 602 47.3
Migut.K00227 Erythranthe guttata HOM05D007669 ORTHO05D009624 2.3e-143 513.5 598 44.8
AUR62031310 Chenopodium quinoa HOM05D007669 ORTHO05D009624 8.8e-143 511.5 611 44.0
Hund06703 Selenicereus undatus HOM05D007669 ORTHO05D009624 8.8e-143 511.5 615 44.7
Eucgr.D01099 Eucalyptus grandis HOM05D007669 ORTHO05D009624 4.4e-142 509.2 527 49.9
Ah.09g232160 Amaranthus hybridus HOM05D007669 ORTHO05D009624 1.7e-141 507.3 613 44.7
SGA_v2.0_scaffold17G07944 Striga asiatica HOM05D007669 ORTHO05D009624 6.3e-141 505.4 594 45.5
Aqoxy7G02932 Aquilegia oxysepala HOM05D007669 ORTHO05D009624 2.2e-138 496.9 613 45.2
VMungo1215G2771 Vigna mungo HOM05D007669 ORTHO05D009624 5.0e-138 495.7 763 37.9
EL10Ac8g19326 Beta vulgaris HOM05D007669 ORTHO05D009624 3.6e-136 489.6 612 42.0
vmacro13101 Vaccinium macrocarpon HOM05D007669 ORTHO05D009624 4.7e-136 489.2 617 44.7
Lsat_1_v5_gn_7_54021 Lactuca sativa HOM05D007669 ORTHO05D009624 5.2e-135 485.7 588 45.6
Sc13g0008100 Simmondsia chinensis HOM05D007669 ORTHO05D009624 2.7e-131 473.4 614 42.5
ECA240G0205 Erigeron canadensis HOM05D007669 ORTHO05D009624 2.8e-128 463.4 620 42.9
Glyma.17G056500 Glycine max HOM05D007669 ORTHO05D009624 1.2e-123 448.0 406 53.2
ATR0580G240 Amborella trichopoda HOM05D007669 ORTHO05D009624 1.7e-122 444.1 610 41.5
Hma1.2p1_0726F.1_g208990 Hydrangea macrophylla HOM05D007669 ORTHO05D009624 2.3e-122 443.7 415 56.6
Psat4g013920 Pisum sativum HOM05D007669 ORTHO05D009624 1.9e-121 440.7 405 53.3
CsaV3_1G032070 Cucumis sativus L. HOM05D007669 ORTHO05D009624 2.5e-121 440.3 413 54.2
HPP92_010780 Vanilla planifolia HOM05D007669 ORTHO05D009624 2.8e-104 383.6 500 43.8
Glyma.13G102601 Glycine max HOM05D007669 ORTHO05D009624 8.1e-104 382.1 455 45.3
FAN12G2799 Fragaria x ananassa HOM05D007669 ORTHO05D009624 4.0e-103 379.8 255 71.8
Eucgr.L01386 Eucalyptus grandis HOM05D007669 ORTHO05D009624 3.4e-102 376.7 402 49.3
AUR62027394 Chenopodium quinoa HOM05D007669 ORTHO05D009624 6.4e-101 372.5 454 43.2
MBI16_g09333_MAGBIO Magnolia biondii HOM05D007669 ORTHO05D009624 1.8e-95 354.4 402 48.3
Zm00001eb432590 Zea mays HOM05D007669 ORTHO05D009624 5.2e-95 352.8 615 36.9
Eucgr.D01111 Eucalyptus grandis HOM05D007669 ORTHO05D009624 1.2e-88 331.6 614 35.7
SEGI_13081 Sequoiadendron giganteum HOM05D007669 ORTHO05D009624 2.6e-86 323.9 598 34.1
CDE02G1706 Ceratophyllum demersum HOM05D007669 ORTHO05D009624 2.1e-80 304.3 458 40.2
DCAR_017992 Daucus carota HOM05D007669 ORTHO05D009624 9.3e-76 288.9 397 38.8
Pp3c9_5530 Physcomitrium patens HOM05D007669 ORTHO05D009624 4.3e-65 253.4 507 32.0
AagrBONN_evm.TU.Sc2ySwM_117.3295 Anthoceros agrestis HOM05D007669 ORTHO05D009624 5.6e-65 253.1 531 32.0
SEGI_05703 Sequoiadendron giganteum HOM05D007669 ORTHO05D009624 1.3e-64 251.9 485 33.0
Haze_22064 Corylus avellana HOM05D007669 ORTHO05D009624 1.9e-57 228.0 199 58.3
Mapoly0147s0035 Marchantia polymorpha HOM05D007669 ORTHO05D009624 1.6e-56 224.9 691 26.9
SMO356G0293 Selaginella moellendorffii HOM05D007669 ORTHO05D009624 2.6e-54 217.6 375 36.0
COL.COLO4_25058 Corchorus olitorius HOM05D007669 ORTHO05D009624 4.7e-43 180.3 164 54.3
Eucgr.D01101 Eucalyptus grandis HOM05D007669 ORTHO05D009624 1.4e-42 178.7 202 45.0
Psat7g062600 Pisum sativum HOM05D007669 ORTHO05D009624 2.3e-42 177.9 134 58.2
DCAR_017991 Daucus carota HOM05D007669 ORTHO05D009624 3.0e-34 151.0 199 40.7
Psat4g139360 Pisum sativum HOM05D007669 ORTHO05D009624 4.0e-18 97.4 90 50.0
Cre07.g356600 Chlamydomonas reinhardtii HOM05D007669 ORTHO05D009624 5.4e-15 87.0 124 39.5
PRCOL_00006584 Prasinoderma coloniale HOM05D024043 ORTHO05D009624 8.6e-13 79.7 109 38.5
MCO10G383 Micromonas commoda HOM05D024043 ORTHO05D009624 9.5e-12 76.3 132 35.6
Mapoly0004s0046 Marchantia polymorpha HOM05D024043 ORTHO05D031244 2.1e-11 75.1 206 26.7
Glyma.13G102550 Glycine max HOM05D007669 ORTHO05D009624 4.7e-11 73.9 94 40.4
PRCOL_00001814 Prasinoderma coloniale HOM05D007669 ORTHO05D009624 4.7e-11 73.9 140 34.3
Pp3c25_1540 Physcomitrium patens HOM05D024043 ORTHO05D031244 1.4e-10 72.4 150 29.3
AagrBONN_evm.TU.Sc2ySwM_369.230 Anthoceros agrestis HOM05D024043 ORTHO05D031244 2.3e-10 71.6 110 34.5
CiPaw.08G030600 Carya illinoinensis HOM05D007669 ORTHO05D009624 4.0e-10 70.9 75 44.0


User provided reference genes

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