Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.1G064400 Prunus persica HOM05D007036 ORTHO05D008885 7.3e-197 690.6 424 100.0
RcHm_v2.0_Chr4g0397671 Rosa chinensis HOM05D007036 ORTHO05D008885 2.3e-166 589.3 425 72.0
FAN12G1049 Fragaria x ananassa HOM05D007036 ORTHO05D008885 1.6e-164 583.2 425 71.1
FAN17G1483 Fragaria x ananassa HOM05D007036 ORTHO05D008885 9.9e-162 573.9 425 69.6
MD11G1028400 Malus domestica HOM05D007036 ORTHO05D008885 1.4e-160 570.1 422 76.5
FAN07G1271 Fragaria x ananassa HOM05D007036 ORTHO05D008885 8.7e-150 534.3 407 68.6
Haze_19103 Corylus avellana HOM05D007036 ORTHO05D008885 8.2e-140 501.1 414 61.6
Atru.chr7.958 Acer truncatum HOM05D007036 ORTHO05D008885 1.9e-136 490.0 413 61.0
QL11p008742 Quercus lobata HOM05D007036 ORTHO05D008885 9.4e-136 487.6 423 74.7
GSVIVG01032259001 Vitis vinifera HOM05D007036 ORTHO05D008885 7.9e-135 484.6 419 76.1
Manes.01G260400 Manihot esculenta HOM05D007036 ORTHO05D008885 7.7e-130 468.0 414 72.0
TAR636G0074 Trochodendron aralioides HOM05D007036 ORTHO05D008885 3.8e-129 465.7 395 66.8
Potri.018G146900 Populus trichocarpa HOM05D007036 ORTHO05D008885 1.9e-128 463.4 425 60.5
MD13G1233100 Malus domestica HOM05D007036 ORTHO05D008885 9.4e-128 461.1 460 57.0
Ciclev10010414m.g Citrus clementina HOM05D007036 ORTHO05D008885 2.1e-127 459.9 410 58.5
Gorai.010G127600 Gossypium raimondii HOM05D007036 ORTHO05D008885 2.6e-125 453.0 419 55.6
Sabra18G0121200 Salix brachista HOM05D007036 ORTHO05D008885 2.6e-125 453.0 444 54.1
Gohir.D06G112000 Gossypium hirsutum HOM05D007036 ORTHO05D008885 4.4e-125 452.2 419 55.6
Gohir.A06G110000 Gossypium hirsutum HOM05D007036 ORTHO05D008885 9.7e-125 451.1 428 54.9
Sabra18G0128300 Salix brachista HOM05D007036 ORTHO05D008885 2.2e-124 449.9 444 53.6
TWI34G0744 Tripterygium wilfordii HOM05D007036 ORTHO05D008885 2.8e-124 449.5 387 59.4
Cfa020750 Carpinus fangiana HOM05D007036 ORTHO05D008885 5.3e-123 445.3 355 63.9
Lj5P749T15 Lonicera japonica HOM05D007036 ORTHO05D008885 2.0e-122 443.4 387 58.9
FvH4_4g06090 Fragaria vesca HOM05D007036 ORTHO05D008885 3.5e-122 442.6 425 59.1
Duzib168G0358 Durio zibethinus HOM05D007036 ORTHO05D008885 1.5e-120 437.2 389 57.8
Aqoxy7G02614 Aquilegia oxysepala HOM05D007036 ORTHO05D008885 3.2e-120 436.0 424 55.2
ClCG11G011370 Citrullus lanatus HOM05D007036 ORTHO05D008885 2.7e-119 433.0 414 55.1
Nn5g27062 Nelumbo nucifera HOM05D007036 ORTHO05D008885 3.6e-119 432.6 410 70.7
Thecc.09G196200 Theobroma cacao HOM05D007036 ORTHO05D008885 1.8e-118 430.3 410 57.6
Rhsim01G0110100 Rhododendron simsii HOM05D007036 ORTHO05D008885 2.0e-117 426.8 395 55.7
vmacro22700 Vaccinium macrocarpon HOM05D007036 ORTHO05D008885 1.3e-116 424.1 386 57.3
CiPaw.16G103900 Carya illinoinensis HOM05D007036 ORTHO05D008885 7.0e-115 418.3 395 72.4
PGSC0003DMG400013697 Solanum tuberosum HOM05D007036 ORTHO05D008885 2.0e-114 416.8 421 53.0
MELO3C003928.2 Cucumis melo HOM05D007036 ORTHO05D008885 2.9e-113 412.9 421 52.7
Lj2g0012301 Lotus japonicus HOM05D007036 ORTHO05D008885 1.5e-112 410.6 384 55.7
Sed0028219 Sechium edule HOM05D007036 ORTHO05D008885 2.7e-111 406.4 355 59.2
AT3G42630 Arabidopsis thaliana HOM05D007036 ORTHO05D008885 1.4e-110 404.1 410 51.5
MBI13_g34303_MAGBIO Magnolia biondii HOM05D007036 ORTHO05D008885 6.8e-110 401.7 368 73.9
Carub.0001s3409 Capsella rubella HOM05D007036 ORTHO05D008885 8.8e-110 401.4 409 51.1
AL5G20840 Arabidopsis lyrata HOM05D007036 ORTHO05D008885 3.4e-109 399.4 410 51.0
Aa31LG4G9890 Aethionema arabicum HOM05D007036 ORTHO05D008885 4.4e-109 399.1 396 53.0
CAN.G106.6 Capsicum annuum HOM05D007036 ORTHO05D008885 5.7e-109 398.7 413 51.8
BcaB01g00982 Brassica carinata HOM05D007036 ORTHO05D008885 1.3e-108 397.5 425 50.8
CsaV3_2G009100 Cucumis sativus L. HOM05D007036 ORTHO05D008885 1.3e-108 397.5 355 57.5
HanXRQChr09g0261951 Helianthus annuus HOM05D007036 ORTHO05D008885 2.8e-108 396.4 368 54.6
CANSAT80G2763 Cannabis sativa HOM05D007036 ORTHO05D008885 3.7e-108 396.0 367 55.0
Sp5g14950 Schrenkiella parvula HOM05D007036 ORTHO05D008885 3.7e-108 396.0 422 50.7
CSS0020574 Camellia sinensis var. sinensis HOM05D007036 ORTHO05D008885 1.1e-107 394.4 328 61.3
Phvul.011G085400 Phaseolus vulgaris HOM05D007036 ORTHO05D008885 1.8e-107 393.7 383 53.0
Cc00_g00150 Coffea canephora HOM05D007036 ORTHO05D008885 2.4e-107 393.3 420 57.4
Lalb_Chr19g0129471 Lupinus albus HOM05D007036 ORTHO05D008885 1.2e-106 391.0 361 57.6
Glyma.01G132800 Glycine max HOM05D007036 ORTHO05D008885 4.5e-106 389.0 411 49.9
Nitab4.5_0000404g0190 Nicotiana tabacum HOM05D007036 ORTHO05D008885 4.5e-106 389.0 417 50.4
Phvul.010G069800 Phaseolus vulgaris HOM05D007036 ORTHO05D008885 5.9e-106 388.7 369 53.7
A06p20770 Brassica napus HOM05D007036 ORTHO05D008885 6.6e-105 385.2 421 49.2
CSS0014683 Camellia sinensis var. sinensis HOM05D007036 ORTHO05D008885 7.2e-104 381.7 237 77.2
Glyma.03G035400 Glycine max HOM05D007036 ORTHO05D008885 1.6e-103 380.6 355 54.9
BolC3t19373H Brassica oleracea HOM05D007036 ORTHO05D008885 2.1e-103 380.2 425 48.7
Carub.0016s0003 Capsella rubella HOM05D007036 ORTHO05D008885 2.8e-103 379.8 397 51.1
Oeu011819.1 Olea europaea HOM05D007036 ORTHO05D008885 2.8e-103 379.8 381 50.7
BcaC01g01887 Brassica carinata HOM05D007036 ORTHO05D008885 3.6e-103 379.4 425 48.7
BraA06t25155Z Brassica rapa HOM05D007036 ORTHO05D008885 6.1e-103 378.6 428 47.9
C03p70950 Brassica napus HOM05D007036 ORTHO05D008885 1.0e-102 377.9 369 53.7
arahy.Tifrunner.gnm1.ann1.UBG147 Arachis hypogaea HOM05D007036 ORTHO05D008885 1.4e-102 377.5 345 55.9
arahy.Tifrunner.gnm1.ann1.1YAE55 Arachis hypogaea HOM05D007036 ORTHO05D008885 3.0e-102 376.3 345 55.4
Peaxi162Scf00954g00025 Petunia axillaris HOM05D007036 ORTHO05D008885 5.2e-102 375.6 356 54.2
Sopen05g027850 Solanum pennellii HOM05D007036 ORTHO05D008885 2.0e-101 373.6 344 55.8
CARHR153640 Cardamine hirsuta HOM05D007036 ORTHO05D008885 2.6e-101 373.2 410 49.0
Cpa.g.sc115.26 Carica papaya HOM05D007036 ORTHO05D008885 3.4e-101 372.9 237 73.4
Sc16g0002180 Simmondsia chinensis HOM05D007036 ORTHO05D008885 2.7e-98 363.2 361 63.4
VMungo0540G1720 Vigna mungo HOM05D007036 ORTHO05D008885 3.5e-98 362.8 237 72.6
Medtr0004s0610 Medicago truncatula HOM05D007036 ORTHO05D008885 7.8e-98 361.7 238 72.3
ECA236G1169 Erigeron canadensis HOM05D007036 ORTHO05D008885 1.3e-97 360.9 379 49.3
Medtr1g051205 Medicago truncatula HOM05D007036 ORTHO05D008885 2.3e-97 360.1 238 71.8
Migut.J00838 Erythranthe guttata HOM05D007036 ORTHO05D008885 2.9e-97 359.8 352 52.3
Ah.07g208320 Amaranthus hybridus HOM05D007036 ORTHO05D008885 3.8e-97 359.4 238 71.0
TPR.G36679 Trifolium pratense HOM05D007036 ORTHO05D008885 8.6e-97 358.2 336 54.2
ATR0626G201 Amborella trichopoda HOM05D007036 ORTHO05D008885 1.1e-96 357.8 355 71.8
MSTRG.5959 Avicennia marina HOM05D007036 ORTHO05D008885 2.8e-95 353.2 237 71.7
Lsat_1_v5_gn_6_31220 Lactuca sativa HOM05D007036 ORTHO05D008885 3.6e-95 352.8 404 49.0
Thhalv10003041m.g Eutrema salsugineum HOM05D007036 ORTHO05D008885 1.0e-94 351.3 410 46.3
AUR62029463 Chenopodium quinoa HOM05D007036 ORTHO05D008885 2.3e-94 350.1 238 69.7
VMungo0331G1618 Vigna mungo HOM05D007036 ORTHO05D008885 2.3e-94 350.1 347 52.4
PSO170G3146 Papaver somniferum HOM05D007036 ORTHO05D008885 2.0e-93 347.1 400 62.5
Psat1g099640 Pisum sativum HOM05D007036 ORTHO05D008885 1.3e-92 344.4 336 52.7
HPP92_028312 Vanilla planifolia HOM05D007036 ORTHO05D008885 2.0e-90 337.0 352 64.5
PGR083G2517 Punica granatum HOM05D007036 ORTHO05D008885 1.7e-89 334.0 348 50.3
unitig_26.g9126 Utricularia gibba HOM05D007036 ORTHO05D008885 3.9e-89 332.8 234 67.9
DCAR_020462 Daucus carota HOM05D007036 ORTHO05D008885 6.6e-89 332.0 355 55.8
SGA_v2.0_scaffold318G48469 Striga asiatica HOM05D007036 ORTHO05D008885 1.1e-88 331.3 383 47.3
CSS0018855 Camellia sinensis var. sinensis HOM05D007036 ORTHO05D008885 4.3e-88 329.3 328 54.0
Ca_04679_v3 Cicer arietinum L. HOM05D007036 ORTHO05D008885 4.3e-88 329.3 223 70.4
Medtr5g068170 Medicago truncatula HOM05D007036 ORTHO05D008885 1.9e-83 313.9 236 67.4
Eucgr.C00064 Eucalyptus grandis HOM05D007036 ORTHO05D008885 3.9e-81 306.2 239 62.8
Os08g0520200 Oryza sativa ssp. japonica HOM05D007036 ORTHO05D008885 3.7e-76 289.7 339 46.3
COL.COLO4_04221 Corchorus olitorius HOM05D007036 ORTHO05D008885 8.3e-76 288.5 423 42.8
Zm00001eb035670 Zea mays HOM05D007036 ORTHO05D008885 1.2e-74 284.6 236 58.1
PSO063G5690 Papaver somniferum HOM05D007036 ORTHO05D008885 6.6e-73 278.9 177 75.1
CDE02G1188 Ceratophyllum demersum HOM05D007036 ORTHO05D004232 4.3e-72 276.2 205 64.9
CDE04G2486 Ceratophyllum demersum HOM05D007036 ORTHO05D008885 1.1e-70 271.6 237 56.5
SEGI_31150 Sequoiadendron giganteum HOM05D007036 ORTHO05D008885 1.7e-68 264.2 241 54.4
COL.COLO4_06173 Corchorus olitorius HOM05D007036 ORTHO05D008885 2.8e-63 246.9 419 39.4
Dinv26474 Davidia involucrata HOM05D007036 ORTHO05D008885 4.2e-51 206.5 286 62.2
Oeu028822.1 Olea europaea HOM05D007036 ORTHO05D008885 3.1e-46 190.3 153 62.1
vmacro20769 Vaccinium macrocarpon HOM05D007036 ORTHO05D008885 3.5e-42 176.8 113 71.7
Mapoly0002s0203 Marchantia polymorpha HOM05D007036 ORTHO05D008885 6.9e-38 162.5 199 45.2
SMO347G0413 Selaginella moellendorffii HOM05D007036 ORTHO05D008885 1.6e-34 151.4 167 47.9
Lj5A765T51 Lonicera japonica HOM05D007036 ORTHO05D008885 1.8e-33 147.9 182 46.7
Pp3c4_3090 Physcomitrium patens HOM05D007036 ORTHO05D008885 1.6e-31 141.4 205 40.5
AagrBONN_evm.TU.Sc2ySwM_228.1431 Anthoceros agrestis HOM05D007036 ORTHO05D008885 4.7e-18 96.7 138 39.1
PGR142G1366 Punica granatum HOM05D007897 ORTHO05D010061 8.8e-17 92.4 233 30.5
Pp3c3_31860 Physcomitrium patens HOM05D007036 ORTHO05D008885 1.1e-16 92.0 174 35.1
Sabra06G0059400 Salix brachista HOM05D007036 ORTHO05D008885 8.5e-12 75.9 78 44.9
ATR0807G097 Amborella trichopoda HOM05D007897 ORTHO05D010061 1.1e-11 75.5 202 29.7
MBI07_g06195_MAGBIO Magnolia biondii HOM05D007897 ORTHO05D010061 4.2e-11 73.6 189 30.7
PSO063G5193 Papaver somniferum HOM05D007897 ORTHO05D010061 3.6e-10 70.5 194 30.4
CSS0018651 Camellia sinensis var. sinensis HOM05D007897 ORTHO05D010061 4.7e-10 70.1 201 30.3
CSS0029276 Camellia sinensis var. sinensis HOM05D007897 ORTHO05D010061 4.7e-10 70.1 201 30.3
Manes.05G198900 Manihot esculenta HOM05D007897 ORTHO05D010061 4.7e-10 70.1 195 28.7
Oeu050722.1 Olea europaea HOM05D005839 ORTHO05D009229 4.7e-10 70.1 185 30.8
VMungo1383G3288 Vigna mungo HOM05D007897 ORTHO05D010061 1.0e-09 68.9 187 29.4
Phvul.001G265200 Phaseolus vulgaris HOM05D007897 ORTHO05D010061 1.4e-09 68.6 186 29.6
PSO017G4232 Papaver somniferum HOM05D007897 ORTHO05D010061 1.8e-09 68.2 188 30.9
Sed0009503 Sechium edule HOM05D007897 ORTHO05D010061 2.3e-09 67.8 193 28.5
Cc03_g09150 Coffea canephora HOM05D007897 ORTHO05D010061 3.0e-09 67.4 179 30.7
ECA248G1461 Erigeron canadensis HOM05D007897 ORTHO05D010061 5.2e-09 66.6 195 26.7
Oeu050723.3 Olea europaea HOM05D007897 ORTHO05D009229 3.3e-08 63.9 173 30.6
Medtr6g034745 Medicago truncatula HOM05D007036 ORTHO05D008885 1.3e-07 62.0 47 55.3
Nn8g41262 Nelumbo nucifera HOM05D007897 ORTHO05D010061 3.7e-07 60.5 196 28.1
MD04G1021700 Malus domestica HOM05D007897 ORTHO05D010061 2.4e-06 57.8 168 29.2


User provided reference genes

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