Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.1G063000 Prunus persica HOM05D006291 ORTHO05D007669 3.6e-62 241.5 130 100.0
MD13G1231800 Malus domestica HOM05D006291 ORTHO05D007669 2.8e-59 231.9 130 95.4
MD16G1236600 Malus domestica HOM05D006291 ORTHO05D007669 7.0e-58 227.3 130 93.8
RcHm_v2.0_Chr4g0397141 Rosa chinensis HOM05D006291 ORTHO05D007669 2.7e-57 225.3 130 92.3
FAN07G2657 Fragaria x ananassa HOM05D006291 ORTHO05D007669 6.6e-56 220.7 130 90.8
FvH4_4g05950 Fragaria vesca HOM05D006291 ORTHO05D007669 1.1e-55 219.9 130 90.0
FAN22G0966 Fragaria x ananassa HOM05D006291 ORTHO05D007669 1.5e-55 219.5 130 90.0
Duzib128G2031 Durio zibethinus HOM05D006291 ORTHO05D007669 1.6e-54 216.1 130 88.5
Duzib128G1629 Durio zibethinus HOM05D006291 ORTHO05D007669 4.7e-54 214.5 130 87.7
TAR362G0416 Trochodendron aralioides HOM05D006291 ORTHO05D007669 4.7e-54 214.5 130 86.9
CiPaw.16G104700 Carya illinoinensis HOM05D006291 ORTHO05D007669 6.1e-54 214.2 130 87.7
Nn8g40626 Nelumbo nucifera HOM05D006291 ORTHO05D007669 1.0e-53 213.4 130 86.9
COL.COLO4_05650 Corchorus olitorius HOM05D006291 ORTHO05D007669 1.4e-53 213.0 128 88.3
THA.LOC104826574 Tarenaya hassleriana HOM05D006291 ORTHO05D007669 2.3e-53 212.2 128 86.7
Migut.L01922 Erythranthe guttata HOM05D006291 ORTHO05D007669 5.2e-53 211.1 128 84.4
Gohir.D05G287200 Gossypium hirsutum HOM05D006291 ORTHO05D007669 6.8e-53 210.7 128 87.5
Manes.02G198400 Manihot esculenta HOM05D006291 ORTHO05D007669 1.5e-52 209.5 130 84.6
Actinidia38532 Actinidia chinensis HOM05D006291 ORTHO05D007669 3.4e-52 208.4 128 85.9
FAN12G2114 Fragaria x ananassa HOM05D006291 ORTHO05D007669 4.4e-52 208.0 132 86.4
Nitab4.5_0003139g0110 Nicotiana tabacum HOM05D006291 ORTHO05D007669 1.3e-51 206.5 128 84.4
GSVIVG01032270001 Vitis vinifera HOM05D006291 ORTHO05D007669 2.2e-51 205.7 130 84.6
PGSC0003DMG400013569 Solanum tuberosum HOM05D006291 ORTHO05D007669 2.8e-51 205.3 128 83.6
EL10Ac2g03616 Beta vulgaris HOM05D006291 ORTHO05D007669 4.9e-51 204.5 130 82.3
Actinidia02463 Actinidia chinensis HOM05D006291 ORTHO05D007669 8.3e-51 203.8 128 84.4
Aqoxy7G02914 Aquilegia oxysepala HOM05D006291 ORTHO05D007669 1.1e-50 203.4 128 82.0
Carub.0013s0004 Capsella rubella HOM05D006291 ORTHO05D007669 1.1e-50 203.4 128 82.8
PSO170G1648 Papaver somniferum HOM05D006291 ORTHO05D007669 1.4e-50 203.0 128 82.8
CAN.G54.10 Capsicum annuum HOM05D006291 ORTHO05D007669 1.8e-50 202.6 128 82.0
Ciclev10009894m.g Citrus clementina HOM05D006291 ORTHO05D007669 2.4e-50 202.2 130 83.1
ECA234G1508 Erigeron canadensis HOM05D006291 ORTHO05D007669 3.1e-50 201.8 130 81.5
PSO063G7114 Papaver somniferum HOM05D006291 ORTHO05D007669 3.1e-50 201.8 128 82.0
Potri.006G079700 Populus trichocarpa HOM05D006291 ORTHO05D007669 3.1e-50 201.8 130 81.5
Rhsim01G0107900 Rhododendron simsii HOM05D006291 ORTHO05D007669 3.1e-50 201.8 127 82.7
Solyc07g042620.4 Solanum lycopersicum HOM05D006291 ORTHO05D007669 3.1e-50 201.8 126 83.3
Sopen07g022310 Solanum pennellii HOM05D006291 ORTHO05D007669 3.1e-50 201.8 126 83.3
Cc06_g23850 Coffea canephora HOM05D006291 ORTHO05D007669 4.1e-50 201.4 128 82.8
Gorai.009G302200 Gossypium raimondii HOM05D006291 ORTHO05D007669 4.1e-50 201.4 130 84.6
MSTRG.10473 Avicennia marina HOM05D006291 ORTHO05D007669 5.4e-50 201.1 128 81.2
AT2G07340 Arabidopsis thaliana HOM05D006291 ORTHO05D007669 7.0e-50 200.7 128 81.2
HanXRQChr12g0358571 Helianthus annuus HOM05D006291 ORTHO05D007669 7.0e-50 200.7 130 81.5
Peaxi162Scf00474g00519 Petunia axillaris HOM05D006291 ORTHO05D007669 7.0e-50 200.7 128 82.0
SGA_v2.0_scaffold21G09601 Striga asiatica HOM05D006291 ORTHO05D007669 9.2e-50 200.3 128 79.7
CSS0003994 Camellia sinensis var. sinensis HOM05D006291 ORTHO05D007669 1.2e-49 199.9 128 82.8
CSS0013846 Camellia sinensis var. sinensis HOM05D006291 ORTHO05D007669 1.2e-49 199.9 128 82.8
Gohir.A05G286200 Gossypium hirsutum HOM05D006291 ORTHO05D007669 1.2e-49 199.9 122 86.9
Ah.10g032820 Amaranthus hybridus HOM05D006291 ORTHO05D007669 3.5e-49 198.4 130 79.2
AUR62020734 Chenopodium quinoa HOM05D006291 ORTHO05D007669 4.5e-49 198.0 130 80.0
AUR62027977 Chenopodium quinoa HOM05D006291 ORTHO05D007669 4.5e-49 198.0 130 80.0
Thecc.10G119800 Theobroma cacao HOM05D006291 ORTHO05D007669 5.9e-49 197.6 130 83.8
HanXRQChr10g0309491 Helianthus annuus HOM05D006291 ORTHO05D007669 7.8e-49 197.2 130 80.8
Eucgr.G00957 Eucalyptus grandis HOM05D006291 ORTHO05D007669 1.3e-48 196.4 130 80.0
PGR044G0028 Punica granatum HOM05D006291 ORTHO05D007669 1.3e-48 196.4 130 79.2
Sc23g0004310 Simmondsia chinensis HOM05D006291 ORTHO05D007669 1.7e-48 196.1 128 80.5
Sabra06G0060300 Salix brachista HOM05D006291 ORTHO05D007669 2.3e-48 195.7 130 80.0
Zm00001eb240760 Zea mays HOM05D006291 ORTHO05D007669 2.3e-48 195.7 130 76.2
CDE02G3570 Ceratophyllum demersum HOM05D006291 ORTHO05D007669 5.0e-48 194.5 125 80.8
Potri.018G149200 Populus trichocarpa HOM05D006291 ORTHO05D007669 6.6e-48 194.1 130 78.5
TWI63G0490 Tripterygium wilfordii HOM05D006291 ORTHO05D007669 8.6e-48 193.7 128 80.5
HPP92_021942 Vanilla planifolia HOM05D006291 ORTHO05D007669 8.6e-48 193.7 130 77.7
CANSAT56G1353 Cannabis sativa HOM05D006291 ORTHO05D007669 1.1e-47 193.4 130 77.7
unitig_8.g3543 Utricularia gibba HOM05D006291 ORTHO05D007669 1.1e-47 193.4 126 79.4
arahy.Tifrunner.gnm1.ann1.8H1PJC Arachis hypogaea HOM05D006291 ORTHO05D007669 1.9e-47 192.6 128 78.1
CDE06G0918 Ceratophyllum demersum HOM05D006291 ORTHO05D007669 1.9e-47 192.6 127 78.0
CSS0029803 Camellia sinensis var. sinensis HOM05D006291 ORTHO05D007669 2.5e-47 192.2 134 78.4
CsaV3_2G009230 Cucumis sativus L. HOM05D006291 ORTHO05D007669 7.3e-47 190.7 119 82.4
HPP92_021968 Vanilla planifolia HOM05D006291 ORTHO05D007669 1.2e-46 189.9 127 77.2
Sed0008839 Sechium edule HOM05D006291 ORTHO05D007669 3.6e-46 188.3 121 81.8
CANSAT56G3141 Cannabis sativa HOM05D006291 ORTHO05D007669 4.7e-46 188.0 130 76.2
Sp6g13890 Schrenkiella parvula HOM05D006291 ORTHO05D007669 6.1e-46 187.6 128 78.9
Oeu028819.1 Olea europaea HOM05D006291 ORTHO05D007669 1.0e-45 186.8 112 87.5
CDE06G1428 Ceratophyllum demersum HOM05D006291 ORTHO05D007669 3.1e-45 185.3 127 77.2
Phvul.011G206700 Phaseolus vulgaris HOM05D006291 ORTHO05D007669 5.2e-45 184.5 130 73.8
Lj3g0009914 Lotus japonicus HOM05D006291 ORTHO05D007669 6.8e-45 184.1 130 73.8
ATR0580G035 Amborella trichopoda HOM05D006291 ORTHO05D007669 8.9e-45 183.7 126 73.8
arahy.Tifrunner.gnm1.ann1.SCY2K5 Arachis hypogaea HOM05D006291 ORTHO05D007669 8.9e-45 183.7 128 75.8
BcaB01g04158 Brassica carinata HOM05D006291 ORTHO05D007669 1.2e-44 183.3 136 72.1
Glyma.15G235500 Glycine max HOM05D006291 ORTHO05D007669 1.2e-44 183.3 130 73.1
Thhalv10015026m.g Eutrema salsugineum HOM05D006291 ORTHO05D007669 1.5e-44 183.0 128 77.3
Glyma.13G197100 Glycine max HOM05D006291 ORTHO05D007669 1.5e-44 183.0 130 73.1
Lalb_Chr01g0007741 Lupinus albus HOM05D006291 ORTHO05D007669 1.5e-44 183.0 128 74.2
VMungo1127G1563 Vigna mungo HOM05D006291 ORTHO05D007669 2.0e-44 182.6 130 73.1
Aa31LG8G11030 Aethionema arabicum HOM05D006291 ORTHO05D007669 3.4e-44 181.8 171 60.8
Ca_23954_v3 Cicer arietinum L. HOM05D006291 ORTHO05D007669 5.8e-44 181.0 128 72.7
TPR.G27823 Trifolium pratense HOM05D006291 ORTHO05D007669 5.8e-44 181.0 128 72.7
Lsat_1_v5_gn_5_80980 Lactuca sativa HOM05D006291 ORTHO05D007669 2.9e-43 178.7 131 77.1
Psat0s418g0040 Pisum sativum HOM05D006291 ORTHO05D007669 8.3e-43 177.2 128 70.3
Hund19355 Selenicereus undatus HOM05D006291 ORTHO05D007669 3.2e-42 175.3 122 79.5
A03p16050 Brassica napus HOM05D006291 ORTHO05D007669 4.1e-42 174.9 128 73.4
MELO3C003910.2 Cucumis melo HOM05D006291 ORTHO05D007669 4.1e-42 174.9 119 77.3
BcaC01g06135 Brassica carinata HOM05D006291 ORTHO05D007669 7.0e-42 174.1 128 72.7
C03p18890 Brassica napus HOM05D006291 ORTHO05D007669 7.0e-42 174.1 128 72.7
Ca_23960_v3 Cicer arietinum L. HOM05D006291 ORTHO05D007669 1.2e-41 173.3 120 74.2
Dinv26485 Davidia involucrata HOM05D006291 ORTHO05D007669 2.3e-40 169.1 125 75.2
DCAR_020455 Daucus carota HOM05D006291 ORTHO05D007669 1.5e-39 166.4 103 84.5
AL3G44130 Arabidopsis lyrata HOM05D006291 ORTHO05D007669 3.1e-37 158.7 98 81.6
MBI16_g09344_MAGBIO Magnolia biondii HOM05D006291 ORTHO05D007669 5.2e-37 157.9 185 54.1
TWI32G0019 Tripterygium wilfordii HOM05D006291 ORTHO05D007669 1.2e-36 156.8 116 72.4
Actinidia02472 Actinidia chinensis HOM05D006291 ORTHO05D007669 2.9e-35 152.1 104 77.9
Nitab4.5_0000170g0080 Nicotiana tabacum HOM05D006291 ORTHO05D007669 4.9e-35 151.4 96 81.2
Pp3c19_4350 Physcomitrium patens HOM05D006291 ORTHO05D007669 4.9e-35 151.4 128 60.2
Medtr8g039140 Medicago truncatula HOM05D006291 ORTHO05D007669 6.4e-35 151.0 103 73.8
Mapoly0027s0144 Marchantia polymorpha HOM05D006291 ORTHO05D007669 8.3e-35 150.6 128 59.4
Atru.BG.15.p Acer truncatum HOM05D006291 ORTHO05D007669 6.0e-33 144.4 101 78.2
Dinv12620 Davidia involucrata HOM05D006291 ORTHO05D007669 3.0e-32 142.1 93 79.6
BcaC04g20645 Brassica carinata HOM05D006291 ORTHO05D007669 1.8e-29 132.9 92 76.1
SMO200G0161 Selaginella moellendorffii HOM05D006291 ORTHO05D007669 3.4e-28 128.6 120 55.8
BraA03t10896Z Brassica rapa HOM05D006291 ORTHO05D007669 1.7e-27 126.3 94 72.3
BolC9t56988H Brassica oleracea HOM05D006291 ORTHO05D007669 1.1e-26 123.6 93 72.0
C09p41100 Brassica napus HOM05D006291 ORTHO05D007669 5.4e-26 121.3 94 70.2
Nitab4.5_0002603g0030 Nicotiana tabacum HOM05D006291 ORTHO05D007669 7.8e-25 117.5 72 83.3
SalBow3G3584 Salvia bowleyana HOM05D006291 ORTHO05D007669 1.2e-22 110.2 108 61.1
AagrBONN_evm.TU.Sc2ySwM_362.1895 Anthoceros agrestis HOM05D006291 ORTHO05D007669 2.8e-22 109.0 99 52.5
Actinidia07563 Actinidia chinensis HOM05D006291 ORTHO05D007669 1.4e-21 106.7 66 84.8
ClCG11G011210 Citrullus lanatus HOM05D006291 ORTHO05D007669 2.6e-20 102.4 62 82.3
CARHR104040 Cardamine hirsuta HOM05D006291 ORTHO05D007669 3.4e-20 102.1 62 83.9
BolC3t14280H Brassica oleracea HOM05D006291 ORTHO05D007669 2.9e-19 99.0 62 79.0
Os02g0462900 Oryza sativa ssp. japonica HOM05D006291 ORTHO05D007669 3.8e-19 98.6 63 74.6
BcaB08g35517 Brassica carinata HOM05D006291 ORTHO05D007669 9.2e-18 94.0 64 73.4
Cpa.g.sc91.61 Carica papaya HOM05D006291 ORTHO05D007669 3.5e-17 92.0 57 86.0
BolC3t14281H Brassica oleracea HOM05D006291 ORTHO05D007669 4.6e-17 91.7 64 73.4
SEGI_05817 Sequoiadendron giganteum HOM05D006291 ORTHO05D007669 1.1e-15 87.0 62 69.4
PRCOL_00006384 Prasinoderma coloniale HOM05D006291 ORTHO05D007669 2.0e-12 76.3 117 34.2
vmacro20755 Vaccinium macrocarpon HOM05D006291 ORTHO05D007669 4.2e-10 68.6 40 85.0
MCO11G208 Micromonas commoda HOM05D006291 ORTHO05D007669 3.0e-08 62.4 115 30.4
Haze_19088 Corylus avellana HOM05D000287 ORTHO05D000319 6.6e-08 61.2 42 71.4
CBR_g16047 Chara braunii HOM05D006291 ORTHO05D007669 1.1e-07 60.5 61 49.2


User provided reference genes

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