Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.1G050700 Prunus persica HOM05D006603 ORTHO05D007786 2.8e-74 282.0 152 100.0
MD16G1228700 Malus domestica HOM05D006603 ORTHO05D007786 1.5e-38 163.3 99 88.9
MD13G1223900 Malus domestica HOM05D006603 ORTHO05D007786 1.2e-37 160.2 99 87.9
FAN17G1046 Fragaria x ananassa HOM05D006603 ORTHO05D007786 1.4e-36 156.8 102 82.4
FAN12G4195 Fragaria x ananassa HOM05D006603 ORTHO05D007786 2.3e-36 156.0 101 82.2
FvH4_4g05040 Fragaria vesca HOM05D006603 ORTHO05D007786 1.5e-35 153.3 101 81.2
RcHm_v2.0_Chr4g0395941 Rosa chinensis HOM05D006603 ORTHO05D007786 1.5e-35 153.3 101 80.2
FAN22G1779 Fragaria x ananassa HOM05D006603 ORTHO05D007786 2.2e-34 149.4 101 79.2
CANSAT78G1588 Cannabis sativa HOM05D006603 ORTHO05D007786 1.4e-33 146.7 96 79.2
Haze_11482 Corylus avellana HOM05D006603 ORTHO05D007786 9.1e-33 144.1 98 78.6
Duzib151G0118 Durio zibethinus HOM05D006603 ORTHO05D007786 2.0e-32 142.9 101 74.3
Duzib212G0187 Durio zibethinus HOM05D006603 ORTHO05D007786 1.0e-31 140.6 122 67.2
QL06p021600 Quercus lobata HOM05D006603 ORTHO05D007786 1.0e-31 140.6 98 74.5
Cfa014798 Carpinus fangiana HOM05D006603 ORTHO05D007786 2.2e-31 139.4 124 62.9
CiPaw.01G176600 Carya illinoinensis HOM05D006603 ORTHO05D007786 2.2e-31 139.4 100 75.0
Ciclev10006126m.g Citrus clementina HOM05D006603 ORTHO05D007786 5.0e-31 138.3 96 77.1
Glyma.20G082000 Glycine max HOM05D006603 ORTHO05D007786 5.0e-31 138.3 99 74.7
Thecc.04G267600 Theobroma cacao HOM05D006603 ORTHO05D007786 5.0e-31 138.3 101 73.3
Psat6g018400 Pisum sativum HOM05D006603 ORTHO05D007786 8.5e-31 137.5 139 61.9
Phvul.007G231900 Phaseolus vulgaris HOM05D006603 ORTHO05D007786 1.1e-30 137.1 93 76.3
Medtr1g045660 Medicago truncatula HOM05D006603 ORTHO05D007786 1.9e-30 136.3 97 74.2
Manes.03G157300 Manihot esculenta HOM05D006603 ORTHO05D007786 2.5e-30 136.0 93 76.3
TWI73G0993 Tripterygium wilfordii HOM05D006603 ORTHO05D007786 4.2e-30 135.2 122 64.8
Lalb_Chr03g0036931 Lupinus albus HOM05D006603 ORTHO05D007786 5.5e-30 134.8 136 59.6
Ca_25848_v3 Cicer arietinum L. HOM05D006603 ORTHO05D007786 9.4e-30 134.0 96 74.0
Lj6g0018890 Lotus japonicus HOM05D006603 ORTHO05D007786 1.2e-29 133.7 99 71.7
TWI09G1292 Tripterygium wilfordii HOM05D006603 ORTHO05D007786 2.1e-29 132.9 101 70.3
TPR.G23967 Trifolium pratense HOM05D006603 ORTHO05D007786 3.6e-29 132.1 93 75.3
Gohir.A09G230800 Gossypium hirsutum HOM05D006603 ORTHO05D007786 6.1e-29 131.3 99 66.7
Gohir.D09G231900 Gossypium hirsutum HOM05D006603 ORTHO05D007786 6.1e-29 131.3 99 66.7
Sabra08G0132100 Salix brachista HOM05D006603 ORTHO05D007786 1.4e-28 130.2 96 71.9
MELO3C023048.2 Cucumis melo HOM05D006603 ORTHO05D007786 1.8e-28 129.8 93 72.0
CsaV3_2G012360 Cucumis sativus L. HOM05D006603 ORTHO05D007786 3.0e-28 129.0 93 71.0
THA.LOC104816009 Tarenaya hassleriana HOM05D006603 ORTHO05D007786 3.0e-28 129.0 99 70.7
MBI10_g39247_MAGBIO Magnolia biondii HOM05D006603 ORTHO05D007786 8.8e-28 127.5 135 57.0
TAR633G2131 Trochodendron aralioides HOM05D006603 ORTHO05D007786 8.8e-28 127.5 138 58.7
Potri.010G064500 Populus trichocarpa HOM05D006603 ORTHO05D007786 1.2e-27 127.1 96 70.8
Dinv29792 Davidia involucrata HOM05D006603 ORTHO05D007786 1.5e-27 126.7 138 55.8
BraA10t42567Z Brassica rapa HOM05D006603 ORTHO05D007786 2.0e-27 126.3 98 70.4
Potri.008G173000 Populus trichocarpa HOM05D006603 ORTHO05D007786 4.4e-27 125.2 96 69.8
PGR004G2303 Punica granatum HOM05D006603 ORTHO05D007786 5.7e-27 124.8 97 69.1
BolC5t29054H Brassica oleracea HOM05D006603 ORTHO05D007786 7.5e-27 124.4 98 69.4
arahy.Tifrunner.gnm1.ann1.T2GGRX Arachis hypogaea HOM05D006603 ORTHO05D007786 1.7e-26 123.2 113 61.9
arahy.Tifrunner.gnm1.ann1.GIKJ41 Arachis hypogaea HOM05D006603 ORTHO05D007786 2.8e-26 122.5 113 61.9
Sp1g03390 Schrenkiella parvula HOM05D006603 ORTHO05D007786 4.8e-26 121.7 97 67.0
AL1G14230 Arabidopsis lyrata HOM05D006603 ORTHO05D007786 6.3e-26 121.3 96 67.7
EL10Ac3g06681 Beta vulgaris HOM05D006603 ORTHO05D007786 6.3e-26 121.3 98 65.3
Thhalv10009014m.g Eutrema salsugineum HOM05D006603 ORTHO05D007786 8.3e-26 120.9 97 68.0
AT1G04555 Arabidopsis thaliana HOM05D006603 ORTHO05D007786 1.4e-25 120.2 96 65.6
Actinidia11378 Actinidia chinensis HOM05D006603 ORTHO05D007786 1.8e-25 119.8 137 52.6
CARHR003900 Cardamine hirsuta HOM05D006603 ORTHO05D007786 2.4e-25 119.4 96 65.6
Cfa014800 Carpinus fangiana HOM05D006603 ORTHO05D007786 2.4e-25 119.4 80 77.5
Sc25g0004840 Simmondsia chinensis HOM05D006603 ORTHO05D007786 4.1e-25 118.6 95 64.2
Hund22279 Selenicereus undatus HOM05D006603 ORTHO05D007786 5.4e-25 118.2 127 56.7
Carub.0001s0377 Capsella rubella HOM05D006603 ORTHO05D007786 1.2e-24 117.1 96 64.6
GSVIVG01027941001 Vitis vinifera HOM05D006603 ORTHO05D007786 1.2e-24 117.1 93 68.8
Aqoxy2G03755 Aquilegia oxysepala HOM05D006603 ORTHO05D007786 2.7e-24 115.9 142 50.7
CSS0001604 Camellia sinensis var. sinensis HOM05D006603 ORTHO05D007786 2.7e-24 115.9 99 63.6
Eucgr.H02902 Eucalyptus grandis HOM05D006603 ORTHO05D007786 3.5e-24 115.5 100 68.0
ATR0787G168 Amborella trichopoda HOM05D006603 ORTHO05D007786 4.5e-24 115.2 158 50.6
BcaNung06560 Brassica carinata HOM05D006603 ORTHO05D007786 4.5e-24 115.2 92 67.4
Cc03_g06500 Coffea canephora HOM05D006603 ORTHO05D007786 4.5e-24 115.2 91 68.1
Zm00001eb191430 Zea mays HOM05D006603 ORTHO05D007786 5.9e-24 114.8 107 61.7
Actinidia39936 Actinidia chinensis HOM05D006603 ORTHO05D007786 7.7e-24 114.4 137 50.4
Manes.15G046500 Manihot esculenta HOM05D006603 ORTHO05D007786 2.2e-23 112.8 85 70.6
Hma1.2p1_0112F.1_g054890 Hydrangea macrophylla HOM05D006603 ORTHO05D007786 3.8e-23 112.1 135 49.6
CAN.G812.23 Capsicum annuum HOM05D006603 ORTHO05D007786 1.5e-22 110.2 89 66.3
Nitab4.5_0005154g0030 Nicotiana tabacum HOM05D006603 ORTHO05D007786 1.9e-22 109.8 88 65.9
CDE04G0122 Ceratophyllum demersum HOM05D006603 ORTHO05D007786 1.6e-21 106.7 133 51.9
Os02g0816700 Oryza sativa ssp. japonica HOM05D006603 ORTHO05D007786 1.6e-21 106.7 93 61.3
DCAR_027355 Daucus carota HOM05D004511 ORTHO05D005348 3.6e-21 105.5 94 59.6
Peaxi162Scf00531g00210 Petunia axillaris HOM05D006603 ORTHO05D007786 3.6e-21 105.5 97 58.8
Dinv27124 Davidia involucrata HOM05D006603 ORTHO05D007786 4.7e-21 105.1 83 68.7
Oeu059390.1 Olea europaea HOM05D006603 ORTHO05D007786 4.7e-21 105.1 96 59.4
PSO210G0805 Papaver somniferum HOM05D006603 ORTHO05D007786 6.1e-21 104.8 96 64.6
Lsat_1_v5_gn_1_75441 Lactuca sativa HOM05D006603 ORTHO05D007786 1.0e-20 104.0 94 62.8
vmacro15486 Vaccinium macrocarpon HOM05D006603 ORTHO05D007786 1.0e-20 104.0 161 47.2
BcaC07g36903 Brassica carinata HOM05D006603 ORTHO05D007786 2.3e-20 102.8 97 64.9
BolC8t46928H Brassica oleracea HOM05D006603 ORTHO05D007786 2.3e-20 102.8 97 64.9
PGSC0003DMG400001502 Solanum tuberosum HOM05D006603 ORTHO05D007786 2.3e-20 102.8 111 52.3
C08p01190 Brassica napus HOM05D003335 ORTHO05D003853 3.0e-20 102.4 100 64.0
Solyc09g090820.4 Solanum lycopersicum HOM05D006603 ORTHO05D007786 3.0e-20 102.4 92 60.9
Sopen09g033770 Solanum pennellii HOM05D006603 ORTHO05D007786 3.0e-20 102.4 89 61.8
BolC8t52747H Brassica oleracea HOM05D000117 ORTHO05D007786 4.0e-20 102.1 133 51.1
MSTRG.9849 Avicennia marina HOM05D006603 ORTHO05D007786 5.2e-20 101.7 98 56.1
Aa31LG1G20320 Aethionema arabicum HOM05D006603 ORTHO05D007786 6.8e-20 101.3 92 62.0
BolC8t46922H Brassica oleracea HOM05D006603 ORTHO05D007786 6.8e-20 101.3 97 63.9
VMungo0720G0308 Vigna mungo HOM05D006603 ORTHO05D007786 6.8e-20 101.3 72 72.2
BolC8t46924H Brassica oleracea HOM05D006603 ORTHO05D007786 8.8e-20 100.9 97 63.9
BolC8t46925H Brassica oleracea HOM05D006603 ORTHO05D007786 8.8e-20 100.9 97 63.9
ECA248G1661 Erigeron canadensis HOM05D006603 ORTHO05D007786 2.0e-19 99.8 140 47.1
PSO210G7184 Papaver somniferum HOM05D006603 ORTHO05D007786 2.0e-19 99.8 97 61.9
HanXRQChr01g0023081 Helianthus annuus HOM05D006603 ORTHO05D007786 2.6e-19 99.4 133 46.6
A08p36880 Brassica napus HOM05D006603 ORTHO05D007786 5.7e-19 98.2 97 62.9
ClCG06G007300 Citrullus lanatus HOM05D006603 ORTHO05D007786 5.7e-19 98.2 73 69.9
BraA08t35589Z Brassica rapa HOM05D003335 ORTHO05D003853 7.5e-19 97.8 96 63.5
arahy.Tifrunner.gnm1.ann1.QP5CHE Arachis hypogaea HOM05D006603 ORTHO05D007786 1.7e-18 96.7 128 50.0
COL.COLO4_15990 Corchorus olitorius HOM05D006603 ORTHO05D007786 4.9e-18 95.1 72 68.1
BraA09t42112Z Brassica rapa HOM05D000117 ORTHO05D007786 8.3e-18 94.4 94 61.7
Migut.G00559 Erythranthe guttata HOM05D006603 ORTHO05D007786 1.8e-17 93.2 98 54.1
SGA_v2.0_scaffold147G36268 Striga asiatica HOM05D006603 ORTHO05D007786 1.6e-16 90.1 95 56.8
Cpa.g.sc59.20 Carica papaya HOM05D006603 ORTHO05D007786 4.5e-16 88.6 72 63.9
Sed0025873 Sechium edule HOM05D006603 ORTHO05D007786 4.5e-16 88.6 69 69.6
Gorai.006G254700 Gossypium raimondii HOM05D006603 ORTHO05D007786 7.8e-16 87.8 72 61.1
C05p02730 Brassica napus HOM05D001210 ORTHO05D001036 2.9e-15 85.9 72 65.3
unitig_32.g11693 Utricularia gibba HOM05D006603 ORTHO05D007786 1.1e-14 84.0 115 46.1
HPP92_020757 Vanilla planifolia HOM05D006603 ORTHO05D007786 9.5e-14 80.9 72 58.3
BcaB03g13488 Brassica carinata HOM05D006603 ORTHO05D007786 1.2e-13 80.5 78 59.0
Ah.04g153810 Amaranthus hybridus HOM05D006603 ORTHO05D007786 2.1e-13 79.7 72 59.7
Rhsim02G0047700 Rhododendron simsii HOM05D006603 ORTHO05D007786 2.1e-13 79.7 109 46.8
arahy.Tifrunner.gnm1.ann1.YUK4FD Arachis hypogaea HOM05D006603 ORTHO05D007786 4.7e-13 78.6 85 56.5
Sabra10G0042500 Salix brachista HOM05D006603 ORTHO05D007786 4.7e-13 78.6 87 50.6
arahy.Tifrunner.gnm1.ann1.49WF5R Arachis hypogaea HOM05D006603 ORTHO05D007786 8.0e-13 77.8 104 49.0
arahy.Tifrunner.gnm1.ann1.N50CGY Arachis hypogaea HOM05D006603 ORTHO05D007786 1.0e-12 77.4 88 53.4
AUR62018035 Chenopodium quinoa HOM05D006603 ORTHO05D007786 3.0e-12 75.9 68 61.8
arahy.Tifrunner.gnm1.ann1.M12JR8 Arachis hypogaea HOM05D006603 ORTHO05D007786 5.2e-12 75.1 89 51.7
AUR62015239 Chenopodium quinoa HOM05D006603 ORTHO05D007786 8.9e-12 74.3 67 61.2
GSVIVG01027940001 Vitis vinifera HOM05D006603 ORTHO05D015671 2.6e-11 72.8 74 58.1
C08p52130 Brassica napus HOM05D000117 ORTHO05D001036 2.4e-09 66.2 73 54.8
Nitab4.5_0001041g0010 Nicotiana tabacum HOM05D006603 ORTHO05D007786 1.6e-08 63.5 68 52.9
A09p67800 Brassica napus HOM05D000117 ORTHO05D001036 7.8e-08 61.2 61 60.7
SMO144G0051 Selaginella moellendorffii HOM05D002103 ORTHO05D007786 5.0e-07 58.5 85 43.5
Mapoly0020s0146 Marchantia polymorpha HOM05D002103 ORTHO05D007786 6.6e-07 58.2 86 43.0
SMO271G0137 Selaginella moellendorffii HOM05D002103 ORTHO05D004020 1.5e-06 57.0 91 40.7
AagrBONN_evm.TU.Sc2ySwM_228.3673 Anthoceros agrestis HOM05D002103 ORTHO05D004020 9.5e-06 54.3 90 41.1


User provided reference genes

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