Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.1G045100 Prunus persica HOM05D006230 ORTHO05D007598 3.9e-79 298.1 155 100.0
MD16G1223800 Malus domestica HOM05D006230 ORTHO05D007598 1.1e-65 253.4 154 85.7
RcHm_v2.0_Chr4g0394691 Rosa chinensis HOM05D006230 ORTHO05D007598 1.2e-56 223.4 154 78.6
FvH4_4g04200 Fragaria vesca HOM05D006230 ORTHO05D007598 7.8e-56 220.7 155 76.8
FAN12G2171 Fragaria x ananassa HOM05D006230 ORTHO05D007598 7.8e-56 220.7 155 76.8
FAN17G1889 Fragaria x ananassa HOM05D006230 ORTHO05D007598 1.9e-54 216.1 155 76.1
Haze_11428 Corylus avellana HOM05D006230 ORTHO05D007598 7.3e-54 214.2 153 73.9
Cfa014753 Carpinus fangiana HOM05D006230 ORTHO05D007598 2.8e-53 212.2 153 72.5
RcHm_v2.0_Chr4g0394651 Rosa chinensis HOM05D006230 ORTHO05D007598 2.4e-49 199.1 154 70.1
CANSAT78G0887 Cannabis sativa HOM05D006230 ORTHO05D007598 3.5e-48 195.3 158 70.9
MD13G1218400 Malus domestica HOM05D006230 ORTHO05D007598 3.5e-48 195.3 114 90.4
Manes.15G043800 Manihot esculenta HOM05D006230 ORTHO05D007598 6.0e-48 194.5 154 65.6
CiPaw.02G108600 Carya illinoinensis HOM05D006230 ORTHO05D007598 7.8e-48 194.1 156 66.7
CANSAT78G0232 Cannabis sativa HOM05D006230 ORTHO05D007598 1.0e-47 193.7 158 69.6
Atru.chr4.1981 Acer truncatum HOM05D006230 ORTHO05D007598 1.3e-47 193.4 153 68.0
Potri.010G068500 Populus trichocarpa HOM05D006230 ORTHO05D007598 1.3e-47 193.4 146 69.9
Sabra10G0038500 Salix brachista HOM05D006230 ORTHO05D007598 2.3e-47 192.6 146 69.9
Dinv27088 Davidia involucrata HOM05D006230 ORTHO05D007598 6.6e-47 191.0 150 67.3
TAR636G3560 Trochodendron aralioides HOM05D006230 ORTHO05D007598 2.5e-46 189.1 157 64.3
Eucgr.H02995 Eucalyptus grandis HOM05D006230 ORTHO05D007598 1.6e-45 186.4 151 64.9
C04p62980 Brassica napus HOM05D006230 ORTHO05D007598 2.8e-45 185.7 153 65.4
BcaB06g28689 Brassica carinata HOM05D006230 ORTHO05D007598 4.8e-45 184.9 154 66.2
BolC4t27775H Brassica oleracea HOM05D006230 ORTHO05D007598 4.8e-45 184.9 153 65.4
QL06p019992 Quercus lobata HOM05D006230 ORTHO05D007598 1.1e-44 183.7 163 65.6
BraA04t18078Z Brassica rapa HOM05D006230 ORTHO05D007598 1.4e-44 183.3 153 64.7
Thhalv10017390m.g Eutrema salsugineum HOM05D006230 ORTHO05D007598 1.4e-44 183.3 116 77.6
CSS0007771 Camellia sinensis var. sinensis HOM05D006230 ORTHO05D007598 2.4e-44 182.6 152 63.8
Carub.0001s0365 Capsella rubella HOM05D006230 ORTHO05D007598 2.4e-44 182.6 124 73.4
Potri.008G169800 Populus trichocarpa HOM05D006230 ORTHO05D007598 2.4e-44 182.6 118 77.1
Sp4g15790 Schrenkiella parvula HOM05D006230 ORTHO05D007598 2.4e-44 182.6 140 67.1
Ciclev10006136m.g Citrus clementina HOM05D006230 ORTHO05D007598 3.1e-44 182.2 155 65.8
AT2G33450 Arabidopsis thaliana HOM05D006230 ORTHO05D007598 6.9e-44 181.0 140 67.9
A04p25750 Brassica napus HOM05D006230 ORTHO05D007598 6.9e-44 181.0 154 64.9
Sp1g03290 Schrenkiella parvula HOM05D006230 ORTHO05D007598 9.0e-44 180.6 116 76.7
AL4G29120 Arabidopsis lyrata HOM05D006230 ORTHO05D007598 1.5e-43 179.9 115 78.3
Aa31LG5G3840 Aethionema arabicum HOM05D006230 ORTHO05D007598 2.0e-43 179.5 140 67.1
Aqoxy2G03714 Aquilegia oxysepala HOM05D006230 ORTHO05D007598 2.0e-43 179.5 153 63.4
Cpa.g.sc44.25 Carica papaya HOM05D006230 ORTHO05D007598 2.0e-43 179.5 138 68.8
PGR004G2031 Punica granatum HOM05D006230 ORTHO05D007598 2.0e-43 179.5 153 64.7
EL10Ac3g04971 Beta vulgaris HOM05D006230 ORTHO05D007598 2.6e-43 179.1 158 64.6
CARHR127460 Cardamine hirsuta HOM05D006230 ORTHO05D007598 2.6e-43 179.1 115 78.3
BcaB02g10562 Brassica carinata HOM05D006230 ORTHO05D007598 4.4e-43 178.3 117 77.8
Carub.0004s1508 Capsella rubella HOM05D006230 ORTHO05D007598 4.4e-43 178.3 115 77.4
Lsat_1_v5_gn_2_39681 Lactuca sativa HOM05D006230 ORTHO05D007598 4.4e-43 178.3 150 65.3
TWI73G0434 Tripterygium wilfordii HOM05D006230 ORTHO05D007598 7.6e-43 177.6 153 67.3
Duzib151G0304 Durio zibethinus HOM05D006230 ORTHO05D007598 1.3e-42 176.8 126 73.8
THA.LOC104801077 Tarenaya hassleriana HOM05D006230 ORTHO05D007598 2.9e-42 175.6 116 75.9
AL1G14110 Arabidopsis lyrata HOM05D006230 ORTHO05D007598 3.8e-42 175.3 116 75.0
Hma1.2p1_0112F.1_g054490 Hydrangea macrophylla HOM05D006230 ORTHO05D007598 4.9e-42 174.9 153 63.4
Sed0003219 Sechium edule HOM05D006230 ORTHO05D007598 4.9e-42 174.9 154 66.9
Sc13g0005900 Simmondsia chinensis HOM05D006230 ORTHO05D007598 6.4e-42 174.5 121 71.9
TWI53G0221 Tripterygium wilfordii HOM05D006230 ORTHO05D007598 6.4e-42 174.5 153 66.0
AUR62015538 Chenopodium quinoa HOM05D006230 ORTHO05D007598 8.4e-42 174.1 151 63.6
COL.COLO4_15930 Corchorus olitorius HOM05D006230 ORTHO05D007598 8.4e-42 174.1 154 68.2
BcaC02g11431 Brassica carinata HOM05D006230 ORTHO05D007598 1.1e-41 173.7 116 75.9
C04p15650 Brassica napus HOM05D006230 ORTHO05D007598 1.1e-41 173.7 116 75.9
Ca_05177_v3 Cicer arietinum L. HOM05D006230 ORTHO05D007598 1.1e-41 173.7 114 78.1
Thecc.04G260000 Theobroma cacao HOM05D006230 ORTHO05D007598 1.1e-41 173.7 155 65.2
Lalb_Chr03g0037521 Lupinus albus HOM05D006230 ORTHO05D007598 1.4e-41 173.3 150 62.0
Lalb_Chr01g0020881 Lupinus albus HOM05D006230 ORTHO05D007598 1.9e-41 172.9 122 72.1
Medtr1g041320 Medicago truncatula HOM05D006230 ORTHO05D007598 1.9e-41 172.9 149 64.4
Phvul.007G278700 Phaseolus vulgaris HOM05D006230 ORTHO05D007598 2.4e-41 172.6 117 75.2
Actinidia20827 Actinidia chinensis HOM05D006230 ORTHO05D007598 3.2e-41 172.2 132 68.9
Actinidia35808 Actinidia chinensis HOM05D006230 ORTHO05D007598 4.2e-41 171.8 140 64.3
Gohir.A02G041200 Gossypium hirsutum HOM05D006230 ORTHO05D007598 4.2e-41 171.8 156 65.4
ECA234G3973 Erigeron canadensis HOM05D006230 ORTHO05D007598 5.4e-41 171.4 120 75.0
Glyma.10G002600 Glycine max HOM05D006230 ORTHO05D007598 5.4e-41 171.4 122 69.7
CsaV3_3G011880 Cucumis sativus L. HOM05D006230 ORTHO05D007598 7.1e-41 171.0 154 65.6
Gohir.D02G047000 Gossypium hirsutum HOM05D006230 ORTHO05D007598 7.1e-41 171.0 156 65.4
BcaC02g07821 Brassica carinata HOM05D006230 ORTHO05D007598 9.3e-41 170.6 154 62.3
ClCG05G004160 Citrullus lanatus HOM05D006230 ORTHO05D007598 9.3e-41 170.6 155 64.5
Nitab4.5_0006936g0040 Nicotiana tabacum HOM05D006230 ORTHO05D007598 2.1e-40 169.5 151 62.3
Solyc09g090410.3 Solanum lycopersicum HOM05D006230 ORTHO05D007598 2.1e-40 169.5 151 64.2
Gorai.005G052000 Gossypium raimondii HOM05D006230 ORTHO05D007598 2.7e-40 169.1 156 64.7
MELO3C006400.2 Cucumis melo HOM05D006230 ORTHO05D007598 3.5e-40 168.7 154 64.9
PGSC0003DMG400017161 Solanum tuberosum HOM05D006230 ORTHO05D007598 3.5e-40 168.7 151 64.2
Nitab4.5_0001425g0090 Nicotiana tabacum HOM05D006230 ORTHO05D007598 4.6e-40 168.3 153 62.1
Sopen09g033320 Solanum pennellii HOM05D006230 ORTHO05D007598 6.0e-40 167.9 151 64.9
Duzib212G0996 Durio zibethinus HOM05D006230 ORTHO05D007598 7.8e-40 167.5 115 74.8
Oeu023312.1 Olea europaea HOM05D006230 ORTHO05D007598 1.0e-39 167.2 118 76.3
PSO017G6779 Papaver somniferum HOM05D006230 ORTHO05D007598 1.0e-39 167.2 151 63.6
CAN.G220.45 Capsicum annuum HOM05D006230 ORTHO05D007598 1.3e-39 166.8 129 69.0
Psat6g103800 Pisum sativum HOM05D006230 ORTHO05D007598 1.3e-39 166.8 116 72.4
GSVIVG01027870001 Vitis vinifera HOM05D006230 ORTHO05D007598 1.3e-39 166.8 118 74.6
HanXRQChr14g0434851 Helianthus annuus HOM05D006230 ORTHO05D007598 1.7e-39 166.4 140 67.1
PSO063G4949 Papaver somniferum HOM05D006230 ORTHO05D007598 2.3e-39 166.0 152 63.2
Sed0015876 Sechium edule HOM05D006230 ORTHO05D007598 2.3e-39 166.0 153 61.4
DCAR_002306 Daucus carota HOM05D006230 ORTHO05D007598 3.9e-39 165.2 122 68.9
BolC4t23134H Brassica oleracea HOM05D006230 ORTHO05D007598 5.1e-39 164.9 117 73.5
Gohir.A10G109400 Gossypium hirsutum HOM05D006230 ORTHO05D007598 8.7e-39 164.1 154 62.3
Cc03_g05900 Coffea canephora HOM05D006230 ORTHO05D007598 1.1e-38 163.7 118 72.0
Lj6g0026311 Lotus japonicus HOM05D006230 ORTHO05D007598 1.1e-38 163.7 118 70.3
Peaxi162Scf00602g00421 Petunia axillaris HOM05D006230 ORTHO05D007598 1.1e-38 163.7 151 62.9
Gorai.011G177300 Gossypium raimondii HOM05D006230 ORTHO05D007598 2.5e-38 162.5 155 62.6
Gohir.D10G157800 Gossypium hirsutum HOM05D006230 ORTHO05D007598 4.3e-38 161.8 155 62.6
TPR.G32792 Trifolium pratense HOM05D006230 ORTHO05D007598 4.3e-38 161.8 114 71.1
ATR0736G074 Amborella trichopoda HOM05D006230 ORTHO05D007598 7.3e-38 161.0 116 73.3
Zm00001eb222850 Zea mays HOM05D006230 ORTHO05D007598 2.1e-37 159.5 121 66.1
Hund11917 Selenicereus undatus HOM05D006230 ORTHO05D007598 4.8e-37 158.3 150 56.7
CDE05G0971 Ceratophyllum demersum HOM05D006230 ORTHO05D007598 8.1e-37 157.5 145 60.7
CDE11G0022 Ceratophyllum demersum HOM05D006230 ORTHO05D007598 1.1e-36 157.1 146 60.3
Os05g0101400 Oryza sativa ssp. japonica HOM05D006230 ORTHO05D007598 2.4e-36 156.0 116 67.2
vmacro08530 Vaccinium macrocarpon HOM05D006230 ORTHO05D007598 2.4e-36 156.0 155 58.1
SalBow3G4585 Salvia bowleyana HOM05D006230 ORTHO05D007598 3.1e-36 155.6 143 56.6
Migut.G00496 Erythranthe guttata HOM05D006230 ORTHO05D007598 9.0e-36 154.1 117 69.2
Zm00001eb047510 Zea mays HOM05D006230 ORTHO05D007598 1.2e-35 153.7 143 57.3
Prupe.8G083300 Prunus persica HOM05D006230 ORTHO05D007598 2.2e-34 149.4 84 90.5
HPP92_012809 Vanilla planifolia HOM05D006230 ORTHO05D007598 2.9e-34 149.1 123 63.4
Oeu059405.1 Olea europaea HOM05D006230 ORTHO05D007598 4.9e-34 148.3 152 55.3
unitig_32.g10851 Utricularia gibba HOM05D006230 ORTHO05D007598 1.4e-33 146.7 121 62.8
arahy.Tifrunner.gnm1.ann1.ADZ0J4 Arachis hypogaea HOM05D006230 ORTHO05D007598 5.4e-33 144.8 76 88.2
MD00G1118000 Malus domestica HOM05D006230 ORTHO05D007598 7.1e-33 144.4 77 92.2
SGA_v2.0_scaffold67G22731 Striga asiatica HOM05D006230 ORTHO05D007598 4.6e-32 141.7 120 60.0
Thecc.10G124200 Theobroma cacao HOM05D006230 ORTHO05D007598 7.9e-32 141.0 76 86.8
Rhsim04G0174900 Rhododendron simsii HOM05D006230 ORTHO05D007598 1.1e-30 137.1 87 78.2
SEGI_13554 Sequoiadendron giganteum HOM05D006230 ORTHO05D007598 1.5e-30 136.7 143 54.5
Pp3c6_1140 Physcomitrium patens HOM05D006230 ORTHO05D007598 3.2e-25 119.0 107 58.9
AagrBONN_evm.TU.Sc2ySwM_228.3795 Anthoceros agrestis HOM05D006230 ORTHO05D007598 4.6e-24 115.2 86 65.1
Pp3c5_28500 Physcomitrium patens HOM05D006230 ORTHO05D007598 6.0e-24 114.8 107 59.8
Ah.04g155450 Amaranthus hybridus HOM05D000071 ORTHO05D007598 1.0e-23 114.0 87 66.7
Duzib052G0467 Durio zibethinus HOM05D006230 ORTHO05D007598 9.6e-22 107.5 128 53.1
SMO131G0001 Selaginella moellendorffii HOM05D006230 ORTHO05D007598 4.8e-21 105.1 75 65.3
Mapoly0087s0077 Marchantia polymorpha HOM05D006230 ORTHO05D007598 8.2e-21 104.4 104 51.9
CBR_g23072 Chara braunii HOM05D006230 ORTHO05D007598 2.6e-19 99.4 80 61.2
Cre06.g265800 Chlamydomonas reinhardtii HOM05D006230 ORTHO05D007598 2.1e-16 89.7 110 45.5
MCO07G061 Micromonas commoda HOM05D006230 ORTHO05D007598 5.1e-15 85.1 76 53.9
Nn3g19733 Nelumbo nucifera HOM05D006230 ORTHO05D007598 6.1e-08 61.6 34 88.2


User provided reference genes

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