Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.1G027700 Prunus persica HOM05D005370 ORTHO05D006659 1.4e-85 319.7 171 100.0
Prupe.1G175900 Prunus persica HOM05D005370 ORTHO05D006659 4.4e-68 261.5 176 81.2
RcHm_v2.0_Chr4g0389631 Rosa chinensis HOM05D005370 ORTHO05D006659 2.2e-59 232.6 177 72.3
FAN17G2982 Fragaria x ananassa HOM05D005370 ORTHO05D006659 4.9e-59 231.5 177 70.6
FAN22G1699 Fragaria x ananassa HOM05D005370 ORTHO05D006659 3.2e-58 228.8 177 69.5
Prupe.2G050700 Prunus persica HOM05D005370 ORTHO05D006659 3.2e-58 228.8 173 73.4
FvH4_4g02310 Fragaria vesca HOM05D005370 ORTHO05D006659 6.6e-56 221.1 177 68.9
QL06p015215 Quercus lobata HOM05D005370 ORTHO05D006659 3.6e-54 215.3 175 67.4
Cfa018256 Carpinus fangiana HOM05D005370 ORTHO05D006659 1.8e-53 213.0 176 65.9
Gorai.005G046600 Gossypium raimondii HOM05D005370 ORTHO05D006659 2.3e-48 196.1 176 63.1
Thecc.04G244800 Theobroma cacao HOM05D005370 ORTHO05D006659 2.3e-48 196.1 176 63.6
TAR362G0430 Trochodendron aralioides HOM05D005370 ORTHO05D006659 2.3e-48 196.1 180 62.8
GSVIVG01018102001 Vitis vinifera HOM05D005370 ORTHO05D006659 2.3e-48 196.1 169 62.1
CiPaw.02G117200 Carya illinoinensis HOM05D005370 ORTHO05D006659 3.0e-48 195.7 172 63.4
Gohir.D02G042266 Gossypium hirsutum HOM05D005370 ORTHO05D006659 5.1e-48 194.9 176 62.5
COL.COLO4_15774 Corchorus olitorius HOM05D005370 ORTHO05D006659 6.6e-48 194.5 176 61.9
Gohir.A02G035301 Gossypium hirsutum HOM05D005370 ORTHO05D006659 6.6e-48 194.5 176 61.9
FAN12G2588 Fragaria x ananassa HOM05D005370 ORTHO05D006659 1.1e-47 193.7 164 65.9
Ciclev10006717m.g Citrus clementina HOM05D005370 ORTHO05D006659 1.2e-46 190.3 174 62.6
TWI18G0973 Tripterygium wilfordii HOM05D005370 ORTHO05D006659 1.2e-46 190.3 173 60.1
Nn3g19501 Nelumbo nucifera HOM05D005370 ORTHO05D006659 2.4e-45 186.0 177 61.0
CANSAT11G0223 Cannabis sativa HOM05D005370 ORTHO05D006659 1.5e-44 183.3 176 61.9
MD04G1026200 Malus domestica HOM05D005370 ORTHO05D006659 7.6e-44 181.0 139 73.4
Sabra02G0036500 Salix brachista HOM05D005370 ORTHO05D006659 3.8e-43 178.7 194 55.7
CSS0021022 Camellia sinensis var. sinensis HOM05D005370 ORTHO05D006659 1.1e-42 177.2 173 57.2
TWI12G0023 Tripterygium wilfordii HOM05D005370 ORTHO05D006659 1.9e-42 176.4 173 58.4
Potri.002G045500 Populus trichocarpa HOM05D005370 ORTHO05D006659 3.2e-42 175.6 191 53.4
CANSAT11G2293 Cannabis sativa HOM05D005370 ORTHO05D006659 4.2e-42 175.3 173 58.4
MBI15_g19756_MAGBIO Magnolia biondii HOM05D005370 ORTHO05D006659 4.2e-42 175.3 172 58.7
AUR62032263 Chenopodium quinoa HOM05D005370 ORTHO05D006659 7.1e-42 174.5 196 53.1
Phvul.007G177000 Phaseolus vulgaris HOM05D005370 ORTHO05D006659 7.1e-42 174.5 173 56.6
AUR62011949 Chenopodium quinoa HOM05D005370 ORTHO05D006659 1.2e-41 173.7 196 53.6
Duzib052G0322 Durio zibethinus HOM05D005370 ORTHO05D006659 7.8e-41 171.0 171 57.3
Manes.01G202000 Manihot esculenta HOM05D005370 ORTHO05D006659 1.3e-40 170.2 189 55.6
arahy.Tifrunner.gnm1.ann1.T9F7M4 Arachis hypogaea HOM05D005370 ORTHO05D006659 6.6e-40 167.9 177 55.4
Cc01_g08030 Coffea canephora HOM05D005370 ORTHO05D006659 8.7e-40 167.5 172 55.8
Ca_14753_v3 Cicer arietinum L. HOM05D005370 ORTHO05D006659 1.1e-39 167.2 174 57.5
Glyma.10G031500 Glycine max HOM05D005370 ORTHO05D006659 1.5e-39 166.8 172 55.2
Ca_24537_v3 Cicer arietinum L. HOM05D005370 ORTHO05D006659 2.5e-39 166.0 174 56.9
Haze_11274 Corylus avellana HOM05D005370 ORTHO05D006659 2.5e-39 166.0 141 65.2
PSO210G0029 Papaver somniferum HOM05D005370 ORTHO05D006659 3.3e-39 165.6 189 53.4
EL10Ac5g10469 Beta vulgaris HOM05D005370 ORTHO05D006659 5.6e-39 164.9 196 50.5
Lsat_1_v5_gn_8_94841 Lactuca sativa HOM05D005370 ORTHO05D006659 9.6e-39 164.1 175 54.3
ECA236G0510 Erigeron canadensis HOM05D005370 ORTHO05D006659 4.8e-38 161.8 177 53.1
Lalb_Chr02g0142451 Lupinus albus HOM05D005370 ORTHO05D006659 4.8e-38 161.8 173 56.1
Dinv22486 Davidia involucrata HOM05D005370 ORTHO05D006659 8.1e-38 161.0 166 56.0
Eucgr.G02606 Eucalyptus grandis HOM05D005370 ORTHO05D006659 1.1e-37 160.6 166 51.2
Lj5g0014373 Lotus japonicus HOM05D005370 ORTHO05D006659 1.1e-37 160.6 174 56.9
Ah.11g050020 Amaranthus hybridus HOM05D005370 ORTHO05D006659 1.4e-37 160.2 196 50.5
HanXRQChr02g0032381 Helianthus annuus HOM05D005370 ORTHO05D006659 1.4e-37 160.2 183 53.0
Solyc04g080950.3 Solanum lycopersicum HOM05D005370 ORTHO05D006659 1.4e-37 160.2 202 50.5
Sopen04g034560 Solanum pennellii HOM05D005370 ORTHO05D006659 1.4e-37 160.2 202 50.5
Aqoxy3G04193 Aquilegia oxysepala HOM05D005370 ORTHO05D006659 3.1e-37 159.1 175 54.3
Migut.D00369 Erythranthe guttata HOM05D005370 ORTHO05D006659 3.1e-37 159.1 178 52.8
Peaxi162Scf00434g00622 Petunia axillaris HOM05D005370 ORTHO05D006659 3.1e-37 159.1 187 51.3
MELO3C005475.2 Cucumis melo HOM05D005370 ORTHO05D006659 4.0e-37 158.7 183 52.5
VMungo0720G0865 Vigna mungo HOM05D005370 ORTHO05D006659 1.5e-36 156.8 173 53.8
CsaV3_5G004690 Cucumis sativus L. HOM05D005370 ORTHO05D006659 2.6e-36 156.0 183 51.9
DCAR_023471 Daucus carota HOM05D005370 ORTHO05D006659 5.8e-36 154.8 185 49.2
PSO238G0055 Papaver somniferum HOM05D005370 ORTHO05D006659 5.8e-36 154.8 189 50.3
arahy.Tifrunner.gnm1.ann1.XNPI4G Arachis hypogaea HOM05D005370 ORTHO05D006659 9.9e-36 154.1 174 52.3
Haze_21184 Corylus avellana HOM05D005370 ORTHO05D006659 1.7e-35 153.3 133 63.2
DCAR_028371 Daucus carota HOM05D005370 ORTHO05D006659 1.7e-35 153.3 185 49.7
arahy.Tifrunner.gnm1.ann1.7J2YFM Arachis hypogaea HOM05D005370 ORTHO05D006659 6.4e-35 151.4 171 52.0
Sed0023556 Sechium edule HOM05D005370 ORTHO05D006659 8.4e-35 151.0 182 49.5
SalBow4G0733 Salvia bowleyana HOM05D005370 ORTHO05D006659 5.4e-34 148.3 178 51.1
SGA_v2.0_scaffold580G53040 Striga asiatica HOM05D005370 ORTHO05D006659 9.3e-34 147.5 192 49.5
HPP92_015262 Vanilla planifolia HOM05D005370 ORTHO05D006659 9.3e-34 147.5 174 52.9
SGA_v2.0_scaffold3169G54286 Striga asiatica HOM05D005370 ORTHO05D006659 1.2e-33 147.1 203 44.8
PGSC0003DMG400003760 Solanum tuberosum HOM05D005370 ORTHO05D006659 3.0e-32 142.5 195 47.2
ATR0665G285 Amborella trichopoda HOM05D005370 ORTHO05D006659 8.7e-32 141.0 175 48.6
Medtr1g070900 Medicago truncatula HOM05D005370 ORTHO05D006659 5.6e-31 138.3 175 53.1
CDE07G1268 Ceratophyllum demersum HOM05D005370 ORTHO05D006659 7.3e-31 137.9 173 45.7
Nitab4.5_0001423g0070 Nicotiana tabacum HOM05D005370 ORTHO05D006659 9.6e-31 137.5 242 40.1
Nn1g02548 Nelumbo nucifera HOM05D005370 ORTHO05D000069 2.8e-30 136.0 141 58.2
Psat3g119240 Pisum sativum HOM05D005370 ORTHO05D006659 2.8e-30 136.0 183 49.7
Actinidia27521 Actinidia chinensis HOM05D005370 ORTHO05D006659 3.6e-30 135.6 180 50.0
CAN.G851.23 Capsicum annuum HOM05D005370 ORTHO05D006659 3.6e-30 135.6 202 44.1
Sopen01g042090 Solanum pennellii HOM05D005370 ORTHO05D006659 1.2e-28 130.6 171 48.0
Oeu025788.2 Olea europaea HOM05D005370 ORTHO05D006659 1.4e-26 123.6 146 53.4
Cpa.g.sc58.39 Carica papaya HOM05D005370 ORTHO05D006659 4.2e-26 122.1 142 53.5
MBI11_g15920_MAGBIO Magnolia biondii HOM05D005370 ORTHO05D006659 4.2e-26 122.1 133 54.9
ClCG01G004480 Citrullus lanatus HOM05D005370 ORTHO05D006659 1.6e-25 120.2 163 47.9
Duzib212G0616 Durio zibethinus HOM05D005370 ORTHO05D006659 3.5e-25 119.0 163 47.2
Psat0s8363g0040 Pisum sativum HOM05D005370 ORTHO05D006659 2.3e-24 116.3 142 50.0
Psat1g083920 Pisum sativum HOM05D005370 ORTHO05D006659 2.3e-24 116.3 142 50.0
Zm00001eb201750 Zea mays HOM05D005370 ORTHO05D006659 3.9e-24 115.5 207 38.6
Actinidia19979 Actinidia chinensis HOM05D005370 ORTHO05D006659 1.9e-23 113.2 119 56.3
Cc01_g05520 Coffea canephora HOM05D005370 ORTHO05D006659 2.1e-22 109.8 141 48.2
Sp2g08480 Schrenkiella parvula HOM05D005370 ORTHO05D006659 2.1e-22 109.8 171 42.7
Sc24g0004270 Simmondsia chinensis HOM05D005370 ORTHO05D006659 2.1e-22 109.8 169 43.2
Hund02875 Selenicereus undatus HOM05D005370 ORTHO05D006659 6.2e-22 108.2 185 39.5
BcaC06g31683 Brassica carinata HOM05D005370 ORTHO05D006659 4.0e-21 105.5 171 40.9
CARHR179930 Cardamine hirsuta HOM05D005370 ORTHO05D006659 1.2e-20 104.0 172 39.5
BcaC06g34636 Brassica carinata HOM05D005370 ORTHO05D006659 1.5e-20 103.6 172 43.0
C07p26250 Brassica napus HOM05D005370 ORTHO05D006659 1.5e-20 103.6 172 43.0
BolC7t43153H Brassica oleracea HOM05D005370 ORTHO05D006659 1.5e-20 103.6 172 43.0
A06p47750 Brassica napus HOM05D005370 ORTHO05D006659 4.5e-20 102.1 168 42.3
Aa31LG5G3560 Aethionema arabicum HOM05D005370 ORTHO05D006659 1.3e-19 100.5 174 42.5
Thhalv10017901m.g Eutrema salsugineum HOM05D005370 ORTHO05D006659 1.7e-19 100.1 172 39.0
BraA06t27643Z Brassica rapa HOM05D005370 ORTHO05D006659 3.8e-19 99.0 172 40.7
AL8G16570 Arabidopsis lyrata HOM05D005370 ORTHO05D006659 8.4e-19 97.8 171 36.8
Psat1g084080 Pisum sativum HOM05D005370 ORTHO05D006659 1.4e-18 97.1 126 47.6
MBI16_g44196_MAGBIO Magnolia biondii HOM05D005370 ORTHO05D006659 2.5e-18 96.3 132 49.2
AT5G43680 Arabidopsis thaliana HOM05D005370 ORTHO05D006659 1.2e-17 94.0 173 39.9
MBI02_g40862_MAGBIO Magnolia biondii HOM05D005370 ORTHO05D006659 2.1e-17 93.2 132 47.7
MBI18_g19775_MAGBIO Magnolia biondii HOM05D005370 ORTHO05D006659 4.6e-17 92.0 144 41.7
MBI16_g45671_MAGBIO Magnolia biondii HOM05D005370 ORTHO05D006659 6.0e-17 91.7 129 46.5
Os11g0550900 Oryza sativa ssp. japonica HOM05D005370 ORTHO05D006659 1.3e-16 90.5 222 32.0
Carub.0008s0497 Capsella rubella HOM05D005370 ORTHO05D006659 5.1e-16 88.6 172 36.0
CDE03G0266 Ceratophyllum demersum HOM05D005370 ORTHO05D006659 8.7e-16 87.8 139 38.1
TPR.G39035 Trifolium pratense HOM05D005370 ORTHO05D000069 1.3e-14 84.0 145 43.4
Mapoly0029s0143 Marchantia polymorpha HOM05D005370 ORTHO05D006659 1.2e-12 77.4 195 33.8
Psat3g119160 Pisum sativum HOM05D005370 ORTHO05D006659 2.6e-12 76.3 145 38.6
MSTRG.18281 Avicennia marina HOM05D005370 ORTHO05D006659 5.8e-12 75.1 65 63.1
Nitab4.5_0001840g0120 Nicotiana tabacum HOM05D005370 ORTHO05D006659 7.6e-12 74.7 65 61.5
Nitab4.5_0002156g0030 Nicotiana tabacum HOM05D005370 ORTHO05D006659 7.6e-12 74.7 65 61.5
SGA_v2.0_scaffold1G00551 Striga asiatica HOM05D006471 ORTHO05D008157 1.0e-11 74.3 45 80.0
SGA_v2.0_scaffold138G35287 Striga asiatica HOM05D005370 ORTHO05D006659 1.7e-11 73.6 45 77.8
Nn8g40523 Nelumbo nucifera HOM05D005370 ORTHO05D006659 2.9e-11 72.8 76 53.9
SEGI_21191 Sequoiadendron giganteum HOM05D005370 ORTHO05D006659 3.8e-11 72.4 118 44.9
CBR_g32014 Chara braunii HOM05D005370 ORTHO05D006659 5.0e-11 72.0 203 31.0
Glyma.02G142900 Glycine max HOM05D005370 ORTHO05D006659 1.4e-10 70.5 54 61.1
PGSC0003DMG400017885 Solanum tuberosum HOM05D005370 ORTHO05D006659 1.9e-10 70.1 64 59.4
Pp3c17_23420 Physcomitrium patens HOM05D005370 ORTHO05D006659 2.5e-10 69.7 186 29.6
Nitab4.5_0001903g0040 Nicotiana tabacum HOM05D005370 ORTHO05D006659 1.6e-09 67.0 42 76.2
SEGI_37606 Sequoiadendron giganteum HOM05D005370 ORTHO05D006659 1.8e-08 63.5 61 50.8
Psat5g092160 Pisum sativum HOM05D009633 ORTHO05D011907 8.7e-08 61.2 69 49.3
QL06p015203 Quercus lobata HOM05D005370 ORTHO05D006659 1.9e-07 60.1 34 85.3


User provided reference genes

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