Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.1G023500 Prunus persica HOM05D008144 ORTHO05D010081 0.0e+00 1528.5 786 100.0
MD13G1201700 Malus domestica HOM05D008144 ORTHO05D010081 1.7e-252 876.3 800 63.8
FAN17G0986 Fragaria x ananassa HOM05D008144 ORTHO05D010081 3.8e-159 566.2 784 48.5
FAN17G1249 Fragaria x ananassa HOM05D008144 ORTHO05D010081 3.8e-159 566.2 784 48.5
FvH4_4g01740 Fragaria vesca HOM05D008144 ORTHO05D010081 5.7e-155 552.4 784 47.6
FAN12G1940 Fragaria x ananassa HOM05D008144 ORTHO05D010081 9.8e-155 551.6 784 47.8
RcHm_v2.0_Chr4g0388601 Rosa chinensis HOM05D008144 ORTHO05D010081 1.2e-149 534.6 718 50.8
FAN22G0807 Fragaria x ananassa HOM05D008144 ORTHO05D010081 1.8e-148 530.8 802 45.6
Potri.008G159200 Populus trichocarpa HOM05D008144 ORTHO05D010081 5.8e-123 446.0 831 40.0
Potri.010G081000 Populus trichocarpa HOM05D008144 ORTHO05D010081 4.9e-114 416.4 827 38.3
Sabra08G0121300 Salix brachista HOM05D008144 ORTHO05D010081 1.7e-111 407.9 821 39.2
QL06p000574 Quercus lobata HOM05D008144 ORTHO05D010081 1.5e-99 368.2 884 35.0
Dinv14059 Davidia involucrata HOM05D008144 ORTHO05D010081 3.4e-99 367.1 818 36.9
CiPaw.01G194000 Carya illinoinensis HOM05D008144 ORTHO05D010081 2.4e-92 344.4 866 34.6
Duzib151G0265 Durio zibethinus HOM05D008144 ORTHO05D010081 2.0e-91 341.3 832 34.6
Haze_11249 Corylus avellana HOM05D008144 ORTHO05D010081 5.5e-89 333.2 935 32.7
MD16G1202000 Malus domestica HOM05D008144 ORTHO05D010081 7.9e-88 329.3 278 65.5
Thecc.04G241000 Theobroma cacao HOM05D008144 ORTHO05D010081 6.7e-87 326.2 802 35.4
Duzib212G0503 Durio zibethinus HOM05D008144 ORTHO05D010081 1.7e-82 311.6 821 34.1
Ciclev10004664m.g Citrus clementina HOM05D008144 ORTHO05D010081 3.6e-80 303.9 581 38.4
Manes.03G171900 Manihot esculenta HOM05D008144 ORTHO05D010081 6.1e-80 303.1 1129 28.3
GSVIVG01018069001 Vitis vinifera HOM05D008144 ORTHO05D010081 7.7e-75 286.2 782 32.5
CSS0041819 Camellia sinensis var. sinensis HOM05D008144 ORTHO05D010081 4.2e-73 280.4 804 32.5
TAR362G0851 Trochodendron aralioides HOM05D008144 ORTHO05D010081 8.2e-69 266.2 903 30.6
CANSAT78G0891 Cannabis sativa HOM05D008144 ORTHO05D010081 1.1e-65 255.8 962 29.5
TWI73G1171 Tripterygium wilfordii HOM05D008144 ORTHO05D010081 2.5e-65 254.6 865 32.3
COL.COLO4_13184 Corchorus olitorius HOM05D008144 ORTHO05D010081 5.2e-63 246.9 805 31.4
Dinv44593 Davidia involucrata HOM05D008144 ORTHO05D010081 3.3e-62 244.2 788 31.2
Atru.chr4.2325 Acer truncatum HOM05D008144 ORTHO05D010081 1.7e-53 215.3 385 40.5
Gohir.A02G034700 Gossypium hirsutum HOM05D008144 ORTHO05D010081 2.7e-48 198.0 789 27.9
Gorai.005G045900 Gossypium raimondii HOM05D008144 ORTHO05D010081 4.7e-48 197.2 792 28.4
Gohir.D02G041500 Gossypium hirsutum HOM05D008144 ORTHO05D010081 1.4e-47 195.7 816 27.9
Glyma.02G002200 Glycine max HOM05D008144 ORTHO05D010081 1.7e-34 152.1 721 28.3
Phvul.007G278800 Phaseolus vulgaris HOM05D008144 ORTHO05D010081 1.6e-32 145.6 225 44.4
VMungo0720G0769 Vigna mungo HOM05D008144 ORTHO05D010081 2.8e-32 144.8 764 29.1
Peaxi162Scf00758g00019 Petunia axillaris HOM05D014400 ORTHO05D010081 9.8e-30 136.3 790 25.6
PGSC0003DMG400006073 Solanum tuberosum HOM05D014400 ORTHO05D010081 1.7e-29 135.6 794 24.9
Solyc09g082900.3 Solanum lycopersicum HOM05D014400 ORTHO05D010081 5.4e-28 130.6 796 24.5
Lj6g0001132 Lotus japonicus HOM05D008144 ORTHO05D010081 7.8e-27 126.7 706 27.3
Lalb_Chr03g0037551 Lupinus albus HOM05D008144 ORTHO05D010081 7.8e-27 126.7 847 25.4
Nitab4.5_0000224g0080 Nicotiana tabacum HOM05D014400 ORTHO05D010081 3.0e-26 124.8 787 26.8
Aqoxy2G03478 Aquilegia oxysepala HOM05D008144 ORTHO05D031257 6.2e-24 117.1 830 24.3
ClCG05G004780 Citrullus lanatus HOM05D025894 ORTHO05D010081 6.2e-24 117.1 589 26.8
Sopen09g031740 Solanum pennellii HOM05D014400 ORTHO05D010081 1.4e-23 115.9 798 23.4
Dinv33607 Davidia involucrata HOM05D008144 ORTHO05D010081 5.8e-22 110.5 133 44.4
Medtr1g041300 Medicago truncatula HOM05D008144 ORTHO05D010081 5.8e-22 110.5 691 25.3
Psat6g103240 Pisum sativum HOM05D008144 ORTHO05D010081 9.8e-22 109.8 186 39.2
Sed0006870 Sechium edule HOM05D025894 ORTHO05D010081 9.8e-22 109.8 531 27.5
TPR.G32783 Trifolium pratense HOM05D008144 ORTHO05D010081 7.1e-20 103.6 811 25.2
Eucgr.H03407 Eucalyptus grandis HOM05D008144 ORTHO05D010081 1.2e-19 102.8 218 37.6
Cpa.g.sc44.134 Carica papaya HOM05D008144 ORTHO05D010081 1.7e-18 99.0 661 24.8
Dinv14057 Davidia involucrata HOM05D008144 ORTHO05D010081 1.7e-18 99.0 282 34.4
PGR004G2389 Punica granatum HOM05D008144 ORTHO05D010081 3.0e-18 98.2 853 24.6
MD16G1201900 Malus domestica HOM05D008144 ORTHO05D010081 2.5e-17 95.1 77 67.5
MELO3C006492.2 Cucumis melo HOM05D025894 ORTHO05D010081 8.1e-16 90.1 489 27.0
CsaV3_3G012810 Cucumis sativus L. HOM05D025894 ORTHO05D010081 1.1e-15 89.7 572 24.7
Nn1g02499 Nelumbo nucifera HOM05D008144 ORTHO05D010081 5.2e-15 87.4 389 27.0
Nitab4.5_0002118g0020 Nicotiana tabacum HOM05D014400 ORTHO05D010081 3.8e-13 81.3 615 25.7
Oeu009118.1 Olea europaea HOM05D008144 ORTHO05D010081 1.9e-12 79.0 158 35.4
DCAR_002363 Daucus carota HOM05D008144 ORTHO05D010081 3.2e-12 78.2 550 23.1
Actinidia04502 Actinidia chinensis HOM05D008144 ORTHO05D010081 2.1e-11 75.5 830 23.4
TAR633G0610 Trochodendron aralioides HOM05D008144 ORTHO05D010081 2.1e-11 75.5 138 35.5
Migut.N00217 Erythranthe guttata HOM05D014400 ORTHO05D010081 4.3e-09 67.8 156 30.1
THA.LOC104809081 Tarenaya hassleriana HOM05D011210 ORTHO05D013204 3.6e-08 64.7 208 32.7
SalBow3G2772 Salvia bowleyana HOM05D014400 ORTHO05D010081 3.1e-07 61.6 225 27.6
SGA_v2.0_scaffold308G48120 Striga asiatica HOM05D014400 ORTHO05D010081 6.9e-07 60.5 210 26.2
Actinidia14081 Actinidia chinensis HOM05D008144 ORTHO05D010081 1.2e-06 59.7 327 26.9


User provided reference genes

Program Settings