Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.1G009500 Prunus persica HOM05D004542 ORTHO05D005380 1.1e-77 293.1 138 100.0
MD04G1010200 Malus domestica HOM05D004542 ORTHO05D005380 1.1e-56 223.4 139 78.4
RcHm_v2.0_Chr4g0415001 Rosa chinensis HOM05D004542 ORTHO05D005380 4.8e-49 198.0 134 67.9
FvH4_4g13880 Fragaria vesca HOM05D004542 ORTHO05D005380 1.3e-46 189.9 133 66.2
FAN12G3669 Fragaria x ananassa HOM05D004542 ORTHO05D005380 1.3e-46 189.9 133 66.2
CSS0014017 Camellia sinensis var. sinensis HOM05D004542 ORTHO05D005380 2.9e-46 188.7 142 66.2
CSS0031140 Camellia sinensis var. sinensis HOM05D004542 ORTHO05D005380 2.9e-46 188.7 142 66.2
CANSAT21G2357 Cannabis sativa HOM05D004542 ORTHO05D005380 1.1e-45 186.8 129 67.4
Cfa004898 Carpinus fangiana HOM05D004542 ORTHO05D005380 1.5e-45 186.4 135 65.9
FAN07G0300 Fragaria x ananassa HOM05D004542 ORTHO05D005380 4.2e-45 184.9 133 64.7
RcHm_v2.0_Chr4g0414951 Rosa chinensis HOM05D004542 ORTHO05D005380 2.1e-44 182.6 136 63.2
Dinv07945 Davidia involucrata HOM05D004542 ORTHO05D005380 1.0e-43 180.3 136 64.7
FAN22G1961 Fragaria x ananassa HOM05D004542 ORTHO05D005380 2.3e-43 179.1 133 63.9
TWI09G1372 Tripterygium wilfordii HOM05D004542 ORTHO05D005380 2.3e-43 179.1 126 65.1
Actinidia31969 Actinidia chinensis HOM05D004542 ORTHO05D005380 1.2e-42 176.8 141 61.7
Manes.01G033600 Manihot esculenta HOM05D004542 ORTHO05D005380 1.5e-42 176.4 138 60.1
Potri.008G090100 Populus trichocarpa HOM05D004542 ORTHO05D005380 1.5e-42 176.4 137 62.8
Potri.010G165100 Populus trichocarpa HOM05D004542 ORTHO05D005380 3.4e-42 175.3 137 59.9
RcHm_v2.0_Chr6g0251041 Rosa chinensis HOM05D004542 ORTHO05D005380 5.7e-42 174.5 139 63.3
Duzib251G0803 Durio zibethinus HOM05D004542 ORTHO05D005380 7.5e-42 174.1 142 59.9
Thecc.02G341300 Theobroma cacao HOM05D004542 ORTHO05D005380 1.7e-41 172.9 143 61.5
Duzib248G0510 Durio zibethinus HOM05D004542 ORTHO05D005380 2.8e-41 172.2 142 59.9
Atru.chr11.1738 Acer truncatum HOM05D004542 ORTHO05D005380 6.3e-41 171.0 126 64.3
Cpa.g.sc69.70 Carica papaya HOM05D004542 ORTHO05D005380 8.3e-41 170.6 131 62.6
Actinidia17747 Actinidia chinensis HOM05D004542 ORTHO05D005380 1.8e-40 169.5 141 60.3
C05p24230 Brassica napus HOM05D004542 ORTHO05D005380 3.1e-40 168.7 137 58.4
TWI73G0467 Tripterygium wilfordii HOM05D004542 ORTHO05D005380 5.4e-40 167.9 129 58.1
BolC5t31159H Brassica oleracea HOM05D004542 ORTHO05D005380 9.1e-40 167.2 137 57.7
THA.LOC104808670 Tarenaya hassleriana HOM05D004542 ORTHO05D005380 4.5e-39 164.9 131 59.5
Ciclev10033055m.g Citrus clementina HOM05D004542 ORTHO05D005380 5.9e-39 164.5 134 60.4
Aa31LG7G8390 Aethionema arabicum HOM05D004542 ORTHO05D005380 7.7e-39 164.1 135 60.7
BcaB03g14086 Brassica carinata HOM05D004542 ORTHO05D005380 1.3e-38 163.3 135 57.0
A09p40150 Brassica napus HOM05D004542 ORTHO05D005380 1.7e-38 162.9 137 56.9
CiPaw.06G087700 Carya illinoinensis HOM05D004542 ORTHO05D005380 2.9e-38 162.2 125 61.6
BcaC05g26392 Brassica carinata HOM05D004542 ORTHO05D005380 3.8e-38 161.8 137 56.2
BcaC06g35127 Brassica carinata HOM05D004542 ORTHO05D005380 6.5e-38 161.0 137 57.7
A07p13070 Brassica napus HOM05D004542 ORTHO05D005380 6.5e-38 161.0 139 56.8
Gohir.A07G047800 Gossypium hirsutum HOM05D004542 ORTHO05D005380 6.5e-38 161.0 146 57.5
Sabra08G0067500 Salix brachista HOM05D004542 ORTHO05D005380 6.5e-38 161.0 149 55.7
TAR622G0172 Trochodendron aralioides HOM05D004542 ORTHO05D005380 6.5e-38 161.0 136 59.6
BraA09t39513Z Brassica rapa HOM05D004542 ORTHO05D005380 8.5e-38 160.6 137 56.2
BraA07t29078Z Brassica rapa HOM05D004542 ORTHO05D005380 1.1e-37 160.2 139 56.1
Carub.0001s2428 Capsella rubella HOM05D004542 ORTHO05D005380 1.1e-37 160.2 138 58.0
PGR083G2602 Punica granatum HOM05D004542 ORTHO05D005380 1.1e-37 160.2 135 57.8
Peaxi162Scf00222g00329 Petunia axillaris HOM05D004542 ORTHO05D005380 1.9e-37 159.5 136 58.8
Gohir.D07G052100 Gossypium hirsutum HOM05D004542 ORTHO05D005380 3.2e-37 158.7 146 57.5
Gorai.001G055100 Gossypium raimondii HOM05D004542 ORTHO05D005380 5.5e-37 157.9 148 56.8
C07p19550 Brassica napus HOM05D004542 ORTHO05D005380 9.4e-37 157.1 137 56.9
BolC7t42472H Brassica oleracea HOM05D004542 ORTHO05D005380 9.4e-37 157.1 137 56.9
HanXRQChr12g0361941 Helianthus annuus HOM05D004542 ORTHO05D005380 1.2e-36 156.8 127 61.4
AT1G26740 Arabidopsis thaliana HOM05D004542 ORTHO05D005380 2.1e-36 156.0 134 58.2
Cpa.g.sc57.38 Carica papaya HOM05D004542 ORTHO05D005380 2.1e-36 156.0 114 63.2
QL05p050003 Quercus lobata HOM05D004542 ORTHO05D005380 2.1e-36 156.0 140 57.9
ECA233G6069 Erigeron canadensis HOM05D004542 ORTHO05D005380 3.6e-36 155.2 138 60.1
THA.LOC104822040 Tarenaya hassleriana HOM05D004542 ORTHO05D005380 3.6e-36 155.2 131 60.3
AL1G38970 Arabidopsis lyrata HOM05D004542 ORTHO05D005380 1.4e-35 153.3 134 57.5
Thhalv10009076m.g Eutrema salsugineum HOM05D004542 ORTHO05D005380 1.8e-35 152.9 134 55.2
Nitab4.5_0013306g0010 Nicotiana tabacum HOM05D004542 ORTHO05D005380 1.8e-35 152.9 125 62.4
Peaxi162Scf00023g02531 Petunia axillaris HOM05D004542 ORTHO05D005380 2.3e-35 152.5 136 58.1
Nitab4.5_0000391g0330 Nicotiana tabacum HOM05D004542 ORTHO05D005380 4.0e-35 151.8 123 63.4
CARHR025220 Cardamine hirsuta HOM05D004542 ORTHO05D005380 2.6e-34 149.1 134 53.7
Hma1.2p1_0357F.1_g134240 Hydrangea macrophylla HOM05D004542 ORTHO05D005380 3.4e-34 148.7 97 73.2
Sp5g24560 Schrenkiella parvula HOM05D004542 ORTHO05D005380 7.5e-34 147.5 129 55.8
Glyma.05G118100 Glycine max HOM05D004542 ORTHO05D005380 9.8e-34 147.1 140 53.6
Lsat_1_v5_gn_8_48901 Lactuca sativa HOM05D004542 ORTHO05D005380 9.8e-34 147.1 140 52.1
Oeu001710.1 Olea europaea HOM05D004542 ORTHO05D005380 2.2e-33 146.0 130 57.7
CANSAT21G0056 Cannabis sativa HOM05D004542 ORTHO05D005380 4.9e-33 144.8 110 63.6
Glyma.08G073000 Glycine max HOM05D004542 ORTHO05D005380 6.3e-33 144.4 140 52.9
Haze_11968 Corylus avellana HOM05D004542 ORTHO05D005380 8.3e-33 144.1 107 64.5
Sopen05g007930 Solanum pennellii HOM05D004542 ORTHO05D005380 1.1e-32 143.7 126 60.3
AL2G28600 Arabidopsis lyrata HOM05D004542 ORTHO05D005380 1.4e-32 143.3 142 51.4
MSTRG.2336 Avicennia marina HOM05D004542 ORTHO05D005380 1.4e-32 143.3 132 56.8
Cc00_g16630 Coffea canephora HOM05D004542 ORTHO05D005380 1.8e-32 142.9 136 56.6
Eucgr.D00185 Eucalyptus grandis HOM05D004542 ORTHO05D005380 1.8e-32 142.9 121 58.7
CsaV3_5G032980 Cucumis sativus L. HOM05D004542 ORTHO05D005380 4.1e-32 141.7 129 52.7
Sc03g0001820 Simmondsia chinensis HOM05D004542 ORTHO05D005380 4.1e-32 141.7 138 52.2
Sopen04g001630 Solanum pennellii HOM05D004542 ORTHO05D005380 7.0e-32 141.0 119 62.2
HanXRQChr15g0476941 Helianthus annuus HOM05D004542 ORTHO05D005380 9.1e-32 140.6 126 58.7
MBI02_g20485_MAGBIO Magnolia biondii HOM05D004542 ORTHO05D005380 1.2e-31 140.2 137 50.4
Sc14g0007580 Simmondsia chinensis HOM05D004542 ORTHO05D005380 1.2e-31 140.2 124 58.9
Solyc04g005590.3 Solanum lycopersicum HOM05D004542 ORTHO05D005380 1.2e-31 140.2 140 55.0
ClCG05G024060 Citrullus lanatus HOM05D004542 ORTHO05D005380 1.6e-31 139.8 128 51.6
DCAR_027429 Daucus carota HOM05D004542 ORTHO05D005380 1.6e-31 139.8 188 44.1
Migut.L01259 Erythranthe guttata HOM05D004542 ORTHO05D005380 2.0e-31 139.4 137 54.7
Aqoxy3G03464 Aquilegia oxysepala HOM05D004542 ORTHO05D005380 2.7e-31 139.0 130 55.4
TPR.G5742 Trifolium pratense HOM05D004542 ORTHO05D005380 3.5e-31 138.7 124 55.6
Psat0s1693g0080 Pisum sativum HOM05D004542 ORTHO05D005380 7.7e-31 137.5 138 52.2
MELO3C012119.2 Cucumis melo HOM05D004542 ORTHO05D005380 1.0e-30 137.1 139 52.5
PSO063G3361 Papaver somniferum HOM05D004542 ORTHO05D005380 1.3e-30 136.7 121 56.2
PGSC0003DMG400002854 Solanum tuberosum HOM05D004542 ORTHO05D005380 1.7e-30 136.3 140 54.3
Manes.05G105400 Manihot esculenta HOM05D004542 ORTHO05D005380 3.8e-30 135.2 112 58.9
Solyc05g013190.4 Solanum lycopersicum HOM05D004542 ORTHO05D005380 3.8e-30 135.2 126 59.5
CDE04G0708 Ceratophyllum demersum HOM05D004542 ORTHO05D005380 6.6e-30 134.4 131 52.7
Sed0021036 Sechium edule HOM05D004542 ORTHO05D005380 6.6e-30 134.4 125 52.8
COL.COLO4_32021 Corchorus olitorius HOM05D004542 ORTHO05D005380 4.2e-29 131.7 108 62.0
arahy.Tifrunner.gnm1.ann1.53F0XR Arachis hypogaea HOM05D004542 ORTHO05D005380 5.5e-29 131.3 130 49.2
arahy.Tifrunner.gnm1.ann1.H527P9 Arachis hypogaea HOM05D004542 ORTHO05D005380 5.5e-29 131.3 130 49.2
MD13G1284400 Malus domestica HOM05D002269 ORTHO05D005380 5.5e-29 131.3 171 46.8
Nitab4.5_0001077g0020 Nicotiana tabacum HOM05D004542 ORTHO05D005380 5.5e-29 131.3 153 49.0
AUR62031723 Chenopodium quinoa HOM05D004542 ORTHO05D005380 9.5e-29 130.6 139 49.6
Lalb_Chr10g0097781 Lupinus albus HOM05D004542 ORTHO05D005380 9.5e-29 130.6 133 51.9
Nn3g17306 Nelumbo nucifera HOM05D004542 ORTHO05D005380 9.5e-29 130.6 138 49.3
Ca_18347_v3 Cicer arietinum L. HOM05D004542 ORTHO05D005380 2.1e-28 129.4 137 50.4
Phvul.002G208200 Phaseolus vulgaris HOM05D004542 ORTHO05D005380 3.6e-28 128.6 142 49.3
Nn3g18387 Nelumbo nucifera HOM05D004542 ORTHO05D005380 4.7e-28 128.3 138 48.6
ECA246G0207 Erigeron canadensis HOM05D004542 ORTHO05D005380 1.0e-27 127.1 140 50.7
VMungo0251G2924 Vigna mungo HOM05D004542 ORTHO05D005380 1.0e-27 127.1 139 48.2
EL10Ac2g02750 Beta vulgaris HOM05D004542 ORTHO05D005380 5.2e-27 124.8 115 53.9
Medtr1g025320 Medicago truncatula HOM05D004542 ORTHO05D005380 5.2e-27 124.8 120 51.7
Rhsim05G0092000 Rhododendron simsii HOM05D004542 ORTHO05D005380 8.9e-27 124.0 112 58.9
RhsimUnG0183400 Rhododendron simsii HOM05D004542 ORTHO05D005380 8.9e-27 124.0 112 58.9
SalBow1G8597 Salvia bowleyana HOM05D004542 ORTHO05D005380 8.9e-27 124.0 120 54.2
CDE07G0585 Ceratophyllum demersum HOM05D004542 ORTHO05D005380 2.6e-26 122.5 124 52.4
Glyma.06G320500 Glycine max HOM05D004542 ORTHO05D005380 5.7e-26 121.3 140 49.3
Sp1g22070 Schrenkiella parvula HOM05D004542 ORTHO05D005380 2.2e-25 119.4 114 53.5
TPR.G8852 Trifolium pratense HOM05D004542 ORTHO05D005380 2.9e-25 119.0 134 48.5
Hund04421 Selenicereus undatus HOM05D004542 ORTHO05D005380 1.1e-24 117.1 110 56.4
SalBow1G7833 Salvia bowleyana HOM05D004542 ORTHO05D005380 2.4e-24 115.9 89 62.9
Ah.08g212630 Amaranthus hybridus HOM05D004542 ORTHO05D005380 4.1e-24 115.2 128 49.2
Lj4g0012875 Lotus japonicus HOM05D004542 ORTHO05D005380 9.2e-24 114.0 130 48.5
SGA_v2.0_scaffold455G51899 Striga asiatica HOM05D004542 ORTHO05D005380 9.2e-24 114.0 126 50.8
SalBow1G4390 Salvia bowleyana HOM05D004542 ORTHO05D005380 1.2e-23 113.6 89 61.8
Ciclev10013639m.g Citrus clementina HOM05D004542 ORTHO05D005380 1.0e-22 110.5 136 46.3
Lj4g0007672 Lotus japonicus HOM05D004542 ORTHO05D005380 1.0e-22 110.5 130 46.2
AUR62032610 Chenopodium quinoa HOM05D004542 ORTHO05D005380 1.7e-22 109.8 173 38.2
SalBow1G1756 Salvia bowleyana HOM05D004542 ORTHO05D005380 1.9e-21 106.3 59 78.0
Os03g0168900 Oryza sativa ssp. japonica HOM05D004542 ORTHO05D005380 2.5e-21 105.9 56 76.8
Zm00001eb402400 Zea mays HOM05D004542 ORTHO05D005380 3.3e-21 105.5 60 76.7
AT1G69485 Arabidopsis thaliana HOM05D004542 ORTHO05D005380 4.3e-21 105.1 64 73.4
Os10g0407100 Oryza sativa ssp. japonica HOM05D004542 ORTHO05D005380 4.3e-21 105.1 55 78.2
Nitab4.5_0000014g0150 Nicotiana tabacum HOM05D004542 ORTHO05D005380 2.6e-18 95.9 146 42.5
Oeu054854.1 Olea europaea HOM05D004542 ORTHO05D005380 3.4e-18 95.5 111 53.2
Sopen03g017060 Solanum pennellii HOM05D004542 ORTHO05D005380 9.8e-18 94.0 65 66.2
PSO782G1969 Papaver somniferum HOM05D004542 ORTHO05D005380 2.2e-17 92.8 103 48.5
Sabra10G0125700 Salix brachista HOM05D004542 ORTHO05D005380 3.5e-15 85.5 95 48.4
Carub.0002s1610 Capsella rubella HOM05D004542 ORTHO05D005380 7.8e-15 84.3 40 87.5
CBR_g23146 Chara braunii HOM05D004542 ORTHO05D005380 7.8e-15 84.3 50 68.0
Mapoly0152s0024 Marchantia polymorpha HOM05D004542 ORTHO05D005380 1.7e-14 83.2 51 62.7
Pp3c1_32410 Physcomitrium patens HOM05D004542 ORTHO05D005380 1.7e-14 83.2 52 65.4
COL.COLO4_27991 Corchorus olitorius HOM05D004542 ORTHO05D005380 3.0e-14 82.4 102 49.0
MBI02_g44667_MAGBIO Magnolia biondii HOM05D004542 ORTHO05D005380 1.5e-13 80.1 105 42.9
vmacro01351 Vaccinium macrocarpon HOM05D004542 ORTHO05D005380 2.5e-13 79.3 87 51.7
Glyma.04G115800 Glycine max HOM05D004542 ORTHO05D005380 4.3e-13 78.6 58 65.5
AagrBONN_evm.TU.Sc2ySwM_228.5417 Anthoceros agrestis HOM05D004542 ORTHO05D005380 7.3e-13 77.8 54 66.7
COL.COLO4_27990 Corchorus olitorius HOM05D004542 ORTHO05D005380 1.2e-12 77.0 83 49.4
SMO358G0607 Selaginella moellendorffii HOM05D000228 ORTHO05D005112 1.1e-11 73.9 49 63.3
Zm00001eb005320 Zea mays HOM05D004542 ORTHO05D005380 7.5e-10 67.8 40 72.5
PGSC0003DMG400005564 Solanum tuberosum HOM05D004542 ORTHO05D005380 6.4e-09 64.7 86 48.8
unitig_8.g3954 Utricularia gibba HOM05D006796 ORTHO05D008615 1.2e-07 60.5 37 73.0
MCO02G272 Micromonas commoda HOM05D004542 ORTHO05D005380 1.6e-07 60.1 61 50.8


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