Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.1G004400 Prunus persica HOM05D007213 ORTHO05D009165 1.4e-296 1022.7 744 100.0
MD04G1004600 Malus domestica HOM05D007213 ORTHO05D009165 1.2e-202 710.7 771 68.2
FAN18G3120 Fragaria x ananassa HOM05D007213 ORTHO05D009165 2.1e-183 646.7 741 65.0
FAN04G0748 Fragaria x ananassa HOM05D007213 ORTHO05D009165 3.2e-179 632.9 747 58.8
FvH4_5g26850 Fragaria vesca HOM05D007213 ORTHO05D009165 1.9e-176 623.6 743 65.3
FAN13G0578 Fragaria x ananassa HOM05D007213 ORTHO05D009165 4.7e-175 619.0 743 64.7
FAN08G1354 Fragaria x ananassa HOM05D007213 ORTHO05D009165 1.4e-174 617.5 739 63.2
RcHm_v2.0_Chr7g0217751 Rosa chinensis HOM05D007213 ORTHO05D009165 9.0e-158 561.6 746 62.6
Cfa014177 Carpinus fangiana HOM05D007213 ORTHO05D009165 1.9e-139 500.7 770 45.3
QL02p016552 Quercus lobata HOM05D007213 ORTHO05D009165 3.9e-137 493.0 791 49.7
GSVIVG01013472001 Vitis vinifera HOM05D007213 ORTHO05D009165 4.5e-133 479.6 728 46.2
Ciclev10000432m.g Citrus clementina HOM05D007213 ORTHO05D009165 2.5e-131 473.8 755 50.7
Haze_22902 Corylus avellana HOM05D007213 ORTHO05D009165 4.6e-130 469.5 548 55.7
Thecc.07G095200 Theobroma cacao HOM05D007213 ORTHO05D009165 3.3e-128 463.4 753 47.4
Dinv05524 Davidia involucrata HOM05D007213 ORTHO05D009165 1.8e-126 457.6 593 53.0
Dinv35497 Davidia involucrata HOM05D007213 ORTHO05D009165 3.1e-126 456.8 788 44.2
Potri.002G000800 Populus trichocarpa HOM05D007213 ORTHO05D009165 9.0e-126 455.3 756 49.3
Sabra02G0000800 Salix brachista HOM05D007213 ORTHO05D009165 1.5e-125 454.5 748 48.4
Cpa.g.sc36.83 Carica papaya HOM05D007213 ORTHO05D009165 2.6e-125 453.8 746 52.0
CSS0032989 Camellia sinensis var. sinensis HOM05D007213 ORTHO05D009165 6.5e-124 449.1 582 53.4
COL.COLO4_36704 Corchorus olitorius HOM05D007213 ORTHO05D009165 4.2e-123 446.4 543 57.5
Actinidia15534 Actinidia chinensis HOM05D007213 ORTHO05D009165 2.5e-120 437.2 592 47.8
Gohir.D05G349200 Gossypium hirsutum HOM05D007213 ORTHO05D009165 4.8e-119 433.0 774 45.6
Gohir.A04G034000 Gossypium hirsutum HOM05D007213 ORTHO05D009165 3.1e-118 430.3 768 44.9
Gorai.009G379100 Gossypium raimondii HOM05D007213 ORTHO05D009165 5.3e-118 429.5 765 45.8
Lj1g0003700 Lotus japonicus HOM05D007213 ORTHO05D009165 4.2e-115 419.9 747 41.1
Rhsim06G0000200 Rhododendron simsii HOM05D007213 ORTHO05D009165 7.9e-114 415.6 814 40.4
Ca_24332_v3 Cicer arietinum L. HOM05D007213 ORTHO05D009165 2.3e-113 414.1 750 39.9
Glyma.01G245400 Glycine max HOM05D007213 ORTHO05D009165 3.3e-112 410.2 541 47.0
Aqoxy5G00918 Aquilegia oxysepala HOM05D007213 ORTHO05D009165 2.2e-111 407.5 820 38.8
Atru.chr13.12 Acer truncatum HOM05D007213 ORTHO05D009165 4.1e-110 403.3 816 43.1
vmacro21731 Vaccinium macrocarpon HOM05D007213 ORTHO05D009165 2.0e-109 401.0 812 39.4
MBI01_g32846_MAGBIO Magnolia biondii HOM05D007213 ORTHO05D009165 4.5e-109 399.8 551 45.9
Sed0002482 Sechium edule HOM05D007213 ORTHO05D009165 4.5e-109 399.8 736 40.1
Nn5g31088 Nelumbo nucifera HOM05D007213 ORTHO05D009165 1.0e-108 398.7 548 45.4
ECA233G0001 Erigeron canadensis HOM05D007213 ORTHO05D009165 2.2e-108 397.5 648 42.1
Medtr5g004630 Medicago truncatula HOM05D007213 ORTHO05D009165 7.2e-107 392.5 584 44.5
THA.LOC104801651 Tarenaya hassleriana HOM05D007213 ORTHO05D009165 1.2e-106 391.7 761 44.0
TPR.G21615 Trifolium pratense HOM05D007213 ORTHO05D009165 2.1e-106 391.0 766 42.4
CANSAT54G2751 Cannabis sativa HOM05D007213 ORTHO05D009165 4.7e-106 389.8 550 46.2
PGSC0003DMG400025663 Solanum tuberosum HOM05D007213 ORTHO05D009165 1.0e-105 388.7 790 37.1
HanXRQChr07g0204351 Helianthus annuus HOM05D007213 ORTHO05D009165 4.0e-105 386.7 816 37.5
Actinidia17102 Actinidia chinensis HOM05D007213 ORTHO05D009165 2.6e-104 384.0 818 39.9
Manes.05G113600 Manihot esculenta HOM05D007213 ORTHO05D009165 7.5e-104 382.5 774 43.2
AUR62042263 Chenopodium quinoa HOM05D007213 ORTHO05D009165 2.4e-102 377.5 810 36.9
BraA05t19677Z Brassica rapa HOM05D007213 ORTHO05D009165 2.7e-101 374.0 744 41.0
Eucgr.F03636 Eucalyptus grandis HOM05D007213 ORTHO05D009165 2.7e-101 374.0 827 38.6
Peaxi162Scf00385g01231 Petunia axillaris HOM05D007213 ORTHO05D009165 2.7e-101 374.0 736 41.2
AUR62036517 Chenopodium quinoa HOM05D007213 ORTHO05D009165 1.7e-100 371.3 810 36.0
CAN.G1330.34 Capsicum annuum HOM05D007213 ORTHO05D009165 8.5e-100 369.0 548 43.6
Phvul.002G054800 Phaseolus vulgaris HOM05D007213 ORTHO05D009165 8.5e-100 369.0 817 40.5
Lsat_1_v5_gn_8_25680 Lactuca sativa HOM05D007213 ORTHO05D009165 1.9e-99 367.9 578 46.4
A05p07120 Brassica napus HOM05D007213 ORTHO05D009165 3.2e-99 367.1 745 40.5
CARHR285120 Cardamine hirsuta HOM05D007213 ORTHO05D009165 1.0e-97 362.1 739 42.2
AL6G36700 Arabidopsis lyrata HOM05D007213 ORTHO05D009165 5.2e-97 359.8 741 41.8
BolC4t22448H Brassica oleracea HOM05D007213 ORTHO05D009165 5.2e-97 359.8 742 42.2
BcaB02g09137 Brassica carinata HOM05D007213 ORTHO05D009165 1.7e-95 354.8 747 40.0
PSO170G0484 Papaver somniferum HOM05D007213 ORTHO05D009165 2.2e-95 354.4 797 37.5
AT5G25070 Arabidopsis thaliana HOM05D007213 ORTHO05D009165 2.8e-95 354.0 751 41.0
TWI12G1047 Tripterygium wilfordii HOM05D007213 ORTHO05D009165 1.1e-94 352.1 750 45.1
DCAR_013347 Daucus carota HOM05D007213 ORTHO05D009165 4.1e-94 350.1 532 44.0
EL10Ac5g11683 Beta vulgaris HOM05D007213 ORTHO05D009165 5.4e-94 349.7 809 35.4
Thhalv10016307m.g Eutrema salsugineum HOM05D007213 ORTHO05D009165 3.5e-93 347.1 751 40.5
Cc10_g00050 Coffea canephora HOM05D007213 ORTHO05D009165 4.5e-93 346.7 792 39.0
PSO017G1686 Papaver somniferum HOM05D007213 ORTHO05D009165 7.7e-93 345.9 789 37.5
C04p08490 Brassica napus HOM05D007213 ORTHO05D009165 1.7e-92 344.7 743 40.6
ATR0605G010 Amborella trichopoda HOM05D007213 ORTHO05D009165 4.7e-90 336.7 496 44.2
CiPaw.07G129300 Carya illinoinensis HOM05D007213 ORTHO05D009165 1.0e-89 335.5 579 41.8
VMungo1215G3163 Vigna mungo HOM05D007213 ORTHO05D009165 1.7e-84 318.2 541 44.4
Psat4g219720 Pisum sativum HOM05D007213 ORTHO05D009165 5.0e-84 316.6 409 48.7
Sp4g21590 Schrenkiella parvula HOM05D007213 ORTHO05D009165 8.0e-82 309.3 751 35.2
SpUn0018_0080 Schrenkiella parvula HOM05D007213 ORTHO05D009165 8.0e-82 309.3 751 35.2
CDE06G2408 Ceratophyllum demersum HOM05D007213 ORTHO05D009165 1.2e-72 278.9 488 37.1
Nitab4.5_0003364g0010 Nicotiana tabacum HOM05D007213 ORTHO05D009165 3.2e-70 270.8 577 36.7
Aa31LG9G12510 Aethionema arabicum HOM05D007213 ORTHO05D009165 2.1e-66 258.1 756 36.4
Eucgr.B03972 Eucalyptus grandis HOM05D007213 ORTHO05D009165 8.1e-66 256.1 418 40.7
Eucgr.B01563 Eucalyptus grandis HOM05D007213 ORTHO05D009165 1.1e-65 255.8 397 41.6
Carub.0006s2290 Capsella rubella HOM05D007213 ORTHO05D009165 4.0e-65 253.8 751 41.9
BcaC02g12047 Brassica carinata HOM05D007213 ORTHO05D009165 2.4e-62 244.6 444 42.3
Zm00001eb035390 Zea mays HOM05D007213 ORTHO05D009165 3.3e-59 234.2 511 37.4
TAR381G0309 Trochodendron aralioides HOM05D007213 ORTHO05D009165 3.6e-58 230.7 499 37.9
PGR031G0765 Punica granatum HOM05D007213 ORTHO05D009165 7.6e-56 223.0 798 31.5
Zm00001eb174530 Zea mays HOM05D007213 ORTHO05D009165 8.4e-55 219.5 781 38.3
Sc07g0007610 Simmondsia chinensis HOM05D007213 ORTHO05D009165 4.1e-54 217.2 615 34.0
TAR381G1607 Trochodendron aralioides HOM05D007213 ORTHO05D009165 6.0e-53 213.4 267 52.1
HPP92_026844 Vanilla planifolia HOM05D007213 ORTHO05D009165 2.2e-47 194.9 393 38.4
Mapoly0055s0021 Marchantia polymorpha HOM05D007213 ORTHO05D009165 8.7e-44 183.0 559 31.3
Glyma.03G099100 Glycine max HOM05D007213 ORTHO05D009165 1.9e-35 155.2 292 39.0
AagrBONN_evm.TU.Sc2ySwM_344.2101 Anthoceros agrestis HOM05D007213 ORTHO05D009165 4.8e-34 150.6 550 27.6
SMO239G0074 Selaginella moellendorffii HOM05D007213 ORTHO05D009165 9.9e-32 142.9 529 33.1
Actinidia08359 Actinidia chinensis HOM05D007213 ORTHO05D009165 1.0e-28 132.9 173 49.1
Hma1.2p1_0810F.1_g221910 Hydrangea macrophylla HOM05D007213 ORTHO05D009165 1.2e-24 119.4 173 42.8
SEGI_34531 Sequoiadendron giganteum HOM05D007213 ORTHO05D009165 5.1e-20 104.0 604 24.5
HPP92_026843 Vanilla planifolia HOM05D007213 ORTHO05D009165 1.6e-18 99.0 128 46.1
Lsat_1_v5_gn_4_123560 Lactuca sativa HOM05D007213 ORTHO05D009165 1.0e-15 89.7 80 58.8
Lsat_1_v5_gn_2_25501 Lactuca sativa HOM05D007213 ORTHO05D009165 2.9e-15 88.2 80 56.2
Lsat_1_v5_gn_4_171321 Lactuca sativa HOM05D007213 ORTHO05D009165 6.5e-15 87.0 80 56.2
Oeu000728.1 Olea europaea HOM05D007213 ORTHO05D009165 1.9e-14 85.5 90 55.6
Dinv19952 Davidia involucrata HOM05D007213 ORTHO05D009165 2.1e-13 82.0 70 61.4
Actinidia37289 Actinidia chinensis HOM05D007213 ORTHO05D009165 5.1e-12 77.4 192 37.5
Actinidia37290 Actinidia chinensis HOM05D007213 ORTHO05D009165 7.4e-11 73.6 133 42.9
ECA238G3550 Erigeron canadensis HOM05D008258 ORTHO05D003386 4.8e-10 70.9 136 39.7
Actinidia08360 Actinidia chinensis HOM05D007213 ORTHO05D009165 7.7e-08 63.5 52 71.2


User provided reference genes

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