Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.1G000800 Prunus persica HOM05D005686 ORTHO05D006798 5.5e-133 477.6 239 100.0
MD04G1000800 Malus domestica HOM05D005686 ORTHO05D006798 2.8e-76 289.3 242 66.9
RcHm_v2.0_Chr4g0384721 Rosa chinensis HOM05D005686 ORTHO05D006798 8.9e-75 284.3 235 68.1
FAN22G1914 Fragaria x ananassa HOM05D005686 ORTHO05D006798 2.0e-74 283.1 238 66.8
FvH4_4g00120 Fragaria vesca HOM05D005686 ORTHO05D006798 2.6e-74 282.7 240 66.2
FAN17G2251 Fragaria x ananassa HOM05D005686 ORTHO05D006798 2.6e-74 282.7 240 66.2
QL11p005743 Quercus lobata HOM05D005686 ORTHO05D006798 2.2e-65 253.1 259 57.9
Thecc.09G202000 Theobroma cacao HOM05D005686 ORTHO05D006798 3.2e-64 249.2 229 58.1
Ciclev10009500m.g Citrus clementina HOM05D005686 ORTHO05D006798 1.3e-62 243.8 235 57.0
Atru.chr7.1021 Acer truncatum HOM05D005686 ORTHO05D006798 3.9e-62 242.3 237 55.3
Hma1.2p1_0391F.1_g142870 Hydrangea macrophylla HOM05D005686 ORTHO05D006798 3.9e-62 242.3 237 57.4
Cfa012874 Carpinus fangiana HOM05D005686 ORTHO05D006798 3.3e-61 239.2 237 58.2
CiPaw.08G000400 Carya illinoinensis HOM05D005686 ORTHO05D006798 5.6e-61 238.4 235 58.3
COL.COLO4_09003 Corchorus olitorius HOM05D005686 ORTHO05D006798 9.5e-61 237.7 224 57.6
GSVIVG01034255001 Vitis vinifera HOM05D005686 ORTHO05D006798 1.2e-60 237.3 230 55.2
ClCG03G011610 Citrullus lanatus HOM05D005686 ORTHO05D006798 1.6e-60 236.9 238 55.0
Cpa.g.sc46.112 Carica papaya HOM05D005686 ORTHO05D006798 3.6e-60 235.7 227 55.1
PGR142G1985 Punica granatum HOM05D005686 ORTHO05D006798 6.2e-60 235.0 227 55.9
Manes.18G145300 Manihot esculenta HOM05D005686 ORTHO05D006798 1.4e-59 233.8 226 55.8
CSS0027001 Camellia sinensis var. sinensis HOM05D005686 ORTHO05D006798 1.8e-59 233.4 239 55.2
vmacro20730 Vaccinium macrocarpon HOM05D005686 ORTHO05D006798 1.8e-59 233.4 251 53.0
CSS0031712 Camellia sinensis var. sinensis HOM05D005686 ORTHO05D006798 3.1e-59 232.6 239 55.2
Sed0010250 Sechium edule HOM05D005686 ORTHO05D006798 4.0e-59 232.3 237 55.3
ECA240G1888 Erigeron canadensis HOM05D005686 ORTHO05D006798 7.5e-58 228.0 237 51.1
CANSAT80G2136 Cannabis sativa HOM05D005686 ORTHO05D006798 1.3e-57 227.3 246 52.4
Eucgr.C02152 Eucalyptus grandis HOM05D005686 ORTHO05D006798 3.7e-57 225.7 237 51.9
Glyma.08G359900 Glycine max HOM05D005686 ORTHO05D006798 3.7e-57 225.7 237 54.0
Lj2g0013423 Lotus japonicus HOM05D005686 ORTHO05D006798 3.7e-57 225.7 242 53.3
TWI32G0912 Tripterygium wilfordii HOM05D005686 ORTHO05D006798 4.9e-57 225.3 223 55.6
Glyma.01G001000 Glycine max HOM05D005686 ORTHO05D006798 6.4e-57 224.9 241 55.2
Gohir.A08G016700 Gossypium hirsutum HOM05D005686 ORTHO05D006798 6.4e-57 224.9 220 56.4
Lsat_1_v5_gn_7_57081 Lactuca sativa HOM05D005686 ORTHO05D006798 3.2e-56 222.6 237 49.8
Oeu000268.1 Olea europaea HOM05D005686 ORTHO05D006798 1.6e-55 220.3 239 51.5
Potri.006G080900 Populus trichocarpa HOM05D005686 ORTHO05D006798 1.6e-55 220.3 237 54.0
Cc06_g23520 Coffea canephora HOM05D005686 ORTHO05D006798 2.7e-55 219.5 235 51.9
Nitab4.5_0000019g0070 Nicotiana tabacum HOM05D005686 ORTHO05D006798 4.6e-55 218.8 240 50.8
Migut.J00862 Erythranthe guttata HOM05D005686 ORTHO05D006798 6.0e-55 218.4 240 52.9
Gorai.004G024000 Gossypium raimondii HOM05D005686 ORTHO05D006798 7.8e-55 218.0 216 55.6
DCAR_014582 Daucus carota HOM05D005686 ORTHO05D006798 1.0e-54 217.6 242 51.2
Nitab4.5_0004788g0010 Nicotiana tabacum HOM05D005686 ORTHO05D006798 1.0e-54 217.6 240 50.4
Potri.018G151500 Populus trichocarpa HOM05D005686 ORTHO05D006798 2.3e-54 216.5 234 52.1
Aqoxy7G02566 Aquilegia oxysepala HOM05D005686 ORTHO05D006798 3.0e-54 216.1 231 51.1
FAN12G3064 Fragaria x ananassa HOM05D005686 ORTHO05D006798 5.1e-54 215.3 198 62.1
Gohir.D08G027100 Gossypium hirsutum HOM05D005686 ORTHO05D006798 6.6e-54 214.9 216 55.1
arahy.Tifrunner.gnm1.ann1.G6JDG7 Arachis hypogaea HOM05D005686 ORTHO05D006798 1.5e-53 213.8 231 55.0
TAR383G0056 Trochodendron aralioides HOM05D005686 ORTHO05D006798 1.5e-53 213.8 223 51.1
arahy.Tifrunner.gnm1.ann1.1A52WD Arachis hypogaea HOM05D005686 ORTHO05D006798 1.9e-53 213.4 231 55.0
ATR0626G256 Amborella trichopoda HOM05D005686 ORTHO05D006798 5.6e-53 211.8 241 51.9
vmacro20894 Vaccinium macrocarpon HOM05D005686 ORTHO05D006798 7.3e-53 211.5 306 44.8
MSTRG.5975 Avicennia marina HOM05D005686 ORTHO05D006798 2.1e-52 209.9 242 50.4
CARHR271940 Cardamine hirsuta HOM05D005686 ORTHO05D006798 2.8e-52 209.5 227 49.3
SGA_v2.0_scaffold21G09585 Striga asiatica HOM05D005686 ORTHO05D006798 4.7e-52 208.8 222 50.0
Sc23g0005700 Simmondsia chinensis HOM05D005686 ORTHO05D006798 1.1e-51 207.6 237 47.7
AL8G34220 Arabidopsis lyrata HOM05D005686 ORTHO05D006798 1.4e-51 207.2 227 49.8
HanXRQChr09g0245301 Helianthus annuus HOM05D005686 ORTHO05D006798 1.4e-51 207.2 236 47.9
EL10Ac2g03596 Beta vulgaris HOM05D005686 ORTHO05D006798 3.1e-51 206.1 237 49.4
AUR62020755 Chenopodium quinoa HOM05D005686 ORTHO05D006798 3.1e-51 206.1 237 47.7
AT5G58110 Arabidopsis thaliana HOM05D005686 ORTHO05D006798 6.8e-51 204.9 227 49.3
PSO063G6522 Papaver somniferum HOM05D005686 ORTHO05D006798 1.2e-50 204.1 219 50.7
PSO170G1777 Papaver somniferum HOM05D005686 ORTHO05D006798 1.2e-50 204.1 218 50.9
BcaB01g04553 Brassica carinata HOM05D005686 ORTHO05D006798 1.5e-50 203.8 231 48.5
MELO3C010013.2 Cucumis melo HOM05D005686 ORTHO05D006798 4.4e-50 202.2 318 41.5
Sp6g19800 Schrenkiella parvula HOM05D005686 ORTHO05D006798 4.4e-50 202.2 227 49.3
Ca_25642_v3 Cicer arietinum L. HOM05D005686 ORTHO05D006798 9.9e-50 201.1 229 52.4
HanXRQChr03g0066651 Helianthus annuus HOM05D005686 ORTHO05D006798 9.9e-50 201.1 236 46.2
THA.LOC104811843 Tarenaya hassleriana HOM05D005686 ORTHO05D006798 1.7e-49 200.3 229 49.3
Carub.0008s1867 Capsella rubella HOM05D005686 ORTHO05D006798 2.2e-49 199.9 227 48.5
Rhsim01G0102500 Rhododendron simsii HOM05D005686 ORTHO05D006798 2.2e-49 199.9 333 40.5
Peaxi162Scf00322g00914 Petunia axillaris HOM05D005686 ORTHO05D006798 2.9e-49 199.5 254 48.0
Thhalv10014732m.g Eutrema salsugineum HOM05D005686 ORTHO05D006798 3.8e-49 199.1 232 49.6
BcaB01g04476 Brassica carinata HOM05D005686 ORTHO05D006798 4.9e-49 198.7 230 47.8
HPP92_017040 Vanilla planifolia HOM05D005686 ORTHO05D006798 6.4e-49 198.4 222 49.5
BraA03t10552Z Brassica rapa HOM05D005686 ORTHO05D006798 8.4e-49 198.0 230 47.4
A03p12400 Brassica napus HOM05D005686 ORTHO05D006798 1.9e-48 196.8 230 47.4
Aa31LG3G13950 Aethionema arabicum HOM05D005244 ORTHO05D006539 5.4e-48 195.3 224 47.8
BolC3t13898H Brassica oleracea HOM05D005686 ORTHO05D006798 5.4e-48 195.3 230 47.4
AUR62027958 Chenopodium quinoa HOM05D005686 ORTHO05D006798 7.1e-48 194.9 237 47.3
BcaC04g19906 Brassica carinata HOM05D005686 ORTHO05D006798 1.2e-47 194.1 224 48.7
A10p16070 Brassica napus HOM05D005686 ORTHO05D006798 1.6e-47 193.7 224 49.1
BraA10t43622Z Brassica rapa HOM05D005686 ORTHO05D006798 1.6e-47 193.7 224 49.1
unitig_699.g19254 Utricularia gibba HOM05D005686 ORTHO05D006798 3.5e-47 192.6 236 47.0
BolC9t57855H Brassica oleracea HOM05D005686 ORTHO05D006798 4.6e-47 192.2 224 48.7
C03p14560 Brassica napus HOM05D005686 ORTHO05D006798 6.0e-47 191.8 231 46.8
Os06g0703800 Oryza sativa ssp. japonica HOM05D005686 ORTHO05D006798 1.3e-46 190.7 220 47.7
C09p50020 Brassica napus HOM05D005686 ORTHO05D006798 2.3e-46 189.9 216 49.5
Psat1g052000 Pisum sativum HOM05D005686 ORTHO05D006798 3.9e-46 189.1 229 49.8
BcaB08g36164 Brassica carinata HOM05D005686 ORTHO05D006798 6.6e-46 188.3 226 48.2
CDE04G0009 Ceratophyllum demersum HOM05D005686 ORTHO05D006798 3.3e-45 186.0 219 46.6
Zm00001eb232010 Zea mays HOM05D005686 ORTHO05D006798 7.3e-45 184.9 219 45.7
Duzib170G0214 Durio zibethinus HOM05D005686 ORTHO05D006798 1.6e-44 183.7 224 49.1
Os02g0139100 Oryza sativa ssp. japonica HOM05D005686 ORTHO05D006798 3.6e-44 182.6 222 47.3
unitig_899.g15184 Utricularia gibba HOM05D000036 ORTHO05D000095 6.2e-44 181.8 216 48.6
CsaV3_1G044180 Cucumis sativus L. HOM05D005686 ORTHO05D006798 2.4e-43 179.9 194 52.1
Dinv26497 Davidia involucrata HOM05D005686 ORTHO05D006798 1.5e-42 177.2 190 55.8
Lalb_Chr24g0401731 Lupinus albus HOM05D005686 ORTHO05D006798 4.4e-42 175.6 224 46.9
Oeu000956.1 Olea europaea HOM05D005686 ORTHO05D006798 4.4e-42 175.6 237 45.6
Medtr6g093220 Medicago truncatula HOM05D005686 ORTHO05D006798 1.1e-40 171.0 216 47.2
Oeu018307.1 Olea europaea HOM05D005686 ORTHO05D006798 3.2e-40 169.5 239 44.4
CAN.G357.2 Capsicum annuum HOM05D005686 ORTHO05D006798 5.4e-40 168.7 176 53.4
Hma1.2p1_0394F.1_g143240 Hydrangea macrophylla HOM05D005686 ORTHO05D006798 8.1e-36 154.8 95 82.1
Gorai.009G341500 Gossypium raimondii HOM05D005686 ORTHO05D006798 2.9e-33 146.4 184 46.2
Gohir.D05G318500 Gossypium hirsutum HOM05D005686 ORTHO05D006798 3.2e-32 142.9 196 43.9
TPR.G21341 Trifolium pratense HOM05D005686 ORTHO05D006798 9.3e-32 141.4 224 42.9
Oeu021239.2 Olea europaea HOM05D005686 ORTHO05D006798 6.7e-30 135.2 238 38.2
Mapoly0062s0098 Marchantia polymorpha HOM05D005686 ORTHO05D006798 6.9e-27 125.2 226 36.7
MBI13_g46510_MAGBIO Magnolia biondii HOM05D005686 ORTHO05D006798 1.5e-26 124.0 152 48.7
SEGI_10084 Sequoiadendron giganteum HOM05D005686 ORTHO05D006798 1.7e-25 120.6 175 39.4
SMO164G0027 Selaginella moellendorffii HOM05D005686 ORTHO05D006798 4.9e-25 119.0 219 36.1
Pp3c16_2550 Physcomitrium patens HOM05D005686 ORTHO05D006798 9.3e-24 114.8 234 31.2
VMungo0464G1575 Vigna mungo HOM05D005686 ORTHO05D006798 2.7e-23 113.2 259 35.9
MBI13_g33582_MAGBIO Magnolia biondii HOM05D005686 ORTHO05D006798 3.5e-23 112.8 73 74.0
Pp3c5_4250 Physcomitrium patens HOM05D005686 ORTHO05D006798 3.5e-23 112.8 237 30.4
Haze_21245 Corylus avellana HOM05D005686 ORTHO05D006798 9.6e-21 104.8 80 65.0
MBI13_g08742_MAGBIO Magnolia biondii HOM05D005686 ORTHO05D006798 1.3e-20 104.4 119 52.1
Hund19347 Selenicereus undatus HOM05D005686 ORTHO05D006798 2.8e-20 103.2 221 33.9
CDE07G1048 Ceratophyllum demersum HOM05D005686 ORTHO05D006798 1.8e-19 100.5 98 55.1
Actinidia07538 Actinidia chinensis HOM05D005686 ORTHO05D006798 1.2e-18 97.8 69 65.2
ClCG04G012860 Citrullus lanatus HOM05D005686 ORTHO05D006798 1.5e-18 97.4 83 60.2
SalBow6G6154 Salvia bowleyana HOM05D005686 ORTHO05D006798 1.5e-18 97.4 134 43.3
Lju50E1T0 Lonicera japonica HOM05D005686 ORTHO05D006798 4.5e-18 95.9 71 66.2
Nn8g41269 Nelumbo nucifera HOM05D005686 ORTHO05D006798 3.2e-16 89.7 62 64.5
arahy.Tifrunner.gnm1.ann1.U8PUWG Arachis hypogaea HOM05D005611 ORTHO05D006852 1.4e-11 74.3 56 73.2
arahy.Tifrunner.gnm1.ann1.11LFFZ Arachis hypogaea HOM05D005686 ORTHO05D006798 2.4e-11 73.6 57 70.2
BcaC07g37307 Brassica carinata HOM05D005686 ORTHO05D006798 1.9e-08 63.9 63 50.8
C08p07420 Brassica napus HOM05D005686 ORTHO05D006798 1.9e-08 63.9 69 47.8
BolC8t47587H Brassica oleracea HOM05D005686 ORTHO05D006798 1.9e-08 63.9 56 53.6
MCO14G409 Micromonas commoda HOM05D005686 ORTHO05D006798 3.9e-06 56.2 191 26.7


User provided reference genes

Program Settings