Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3s30_530 Physcomitrium patens HOM05D004605 ORTHO05D005804 1.1e-121 439.9 215 100.0
PSO732G0027 Papaver somniferum HOM05D004605 ORTHO05D005804 1.8e-26 123.6 212 37.3
VMungo1383G3490 Vigna mungo HOM05D004605 ORTHO05D005804 2.4e-26 123.2 207 40.6
ClCG07G016040 Citrullus lanatus HOM05D004605 ORTHO05D005804 4.0e-26 122.5 210 37.1
Haze_14382 Corylus avellana HOM05D004605 ORTHO05D005804 5.2e-26 122.1 209 37.3
Nitab4.5_0001339g0150 Nicotiana tabacum HOM05D004605 ORTHO05D005804 8.9e-26 121.3 211 36.0
PSO675G6317 Papaver somniferum HOM05D004605 ORTHO05D005804 8.9e-26 121.3 212 36.8
Cfa007695 Carpinus fangiana HOM05D004605 ORTHO05D005804 1.5e-25 120.6 210 37.6
Duzib138G1714 Durio zibethinus HOM05D004605 ORTHO05D005804 4.4e-25 119.0 210 36.2
arahy.Tifrunner.gnm1.ann1.M6S7AL Arachis hypogaea HOM05D004605 ORTHO05D005804 7.6e-25 118.2 210 36.7
Peaxi162Scf00020g10235 Petunia axillaris HOM05D004605 ORTHO05D005804 7.6e-25 118.2 212 36.3
Hund16233 Selenicereus undatus HOM05D004605 ORTHO05D005804 7.6e-25 118.2 212 38.2
SGA_v2.0_scaffold148G36445 Striga asiatica HOM05D004605 ORTHO05D005804 9.9e-25 117.9 209 36.4
Phvul.008G027000 Phaseolus vulgaris HOM05D004605 ORTHO05D005804 1.3e-24 117.5 210 38.6
Sed0020846 Sechium edule HOM05D004605 ORTHO05D005804 1.3e-24 117.5 212 35.8
Solyc02g089230.3 Solanum lycopersicum HOM05D004605 ORTHO05D005804 2.2e-24 116.7 209 33.0
Oeu031839.1 Olea europaea HOM05D004605 ORTHO05D005804 2.9e-24 116.3 212 36.3
COL.COLO4_10258 Corchorus olitorius HOM05D004605 ORTHO05D005804 3.8e-24 115.9 211 36.0
Sopen02g034020 Solanum pennellii HOM05D004605 ORTHO05D005804 3.8e-24 115.9 209 33.0
Thecc.04G106100 Theobroma cacao HOM05D004605 ORTHO05D005804 3.8e-24 115.9 210 35.2
arahy.Tifrunner.gnm1.ann1.90K79T Arachis hypogaea HOM05D004605 ORTHO05D005804 4.9e-24 115.5 210 36.7
Glyma.18G273900 Glycine max HOM05D004605 ORTHO05D005804 4.9e-24 115.5 208 38.5
Nitab4.5_0007530g0010 Nicotiana tabacum HOM05D004605 ORTHO05D005804 4.9e-24 115.5 209 34.0
CSS0024904 Camellia sinensis var. sinensis HOM05D004605 ORTHO05D005804 6.4e-24 115.2 214 36.9
MELO3C026298.2 Cucumis melo HOM05D004605 ORTHO05D005804 6.4e-24 115.2 212 36.3
Duzib133G0947 Durio zibethinus HOM05D004605 ORTHO05D005804 6.4e-24 115.2 211 36.0
Gohir.A07G179800 Gossypium hirsutum HOM05D004605 ORTHO05D005804 6.4e-24 115.2 208 36.5
Gohir.D07G186600 Gossypium hirsutum HOM05D004605 ORTHO05D005804 6.4e-24 115.2 210 35.7
Gorai.001G207200 Gossypium raimondii HOM05D004605 ORTHO05D005804 6.4e-24 115.2 210 35.7
Phvul.008G026800 Phaseolus vulgaris HOM05D004605 ORTHO05D005804 6.4e-24 115.2 210 38.6
CiPaw.03G083100 Carya illinoinensis HOM05D004605 ORTHO05D005804 8.4e-24 114.8 211 38.9
CsaV3_4G010080 Cucumis sativus L. HOM05D004605 ORTHO05D005804 8.4e-24 114.8 212 36.3
Lju361C6G5 Lonicera japonica HOM05D004605 ORTHO05D005804 8.4e-24 114.8 212 34.9
Aqoxy3G03714 Aquilegia oxysepala HOM05D004605 ORTHO05D005804 1.1e-23 114.4 212 36.3
PGSC0003DMG400001379 Solanum tuberosum HOM05D004605 ORTHO05D005804 1.1e-23 114.4 209 33.5
VMungo1383G2960 Vigna mungo HOM05D004605 ORTHO05D005804 1.1e-23 114.4 210 38.6
Ciclev10012619m.g Citrus clementina HOM05D004605 ORTHO05D005804 1.4e-23 114.0 211 35.1
SalBow1G3999 Salvia bowleyana HOM05D004605 ORTHO05D005804 1.4e-23 114.0 212 35.8
GSVIVG01036547001 Vitis vinifera HOM05D004605 ORTHO05D005804 1.4e-23 114.0 212 38.2
TAR629G2115 Trochodendron aralioides HOM05D004605 ORTHO05D005804 1.9e-23 113.6 211 35.1
MSTRG.15437 Avicennia marina HOM05D004605 ORTHO05D005804 2.4e-23 113.2 206 36.9
Phvul.008G027600 Phaseolus vulgaris HOM05D004605 ORTHO05D005804 2.4e-23 113.2 209 38.3
CAN.G497.71 Capsicum annuum HOM05D004605 ORTHO05D005804 3.2e-23 112.8 209 33.0
Glyma.08G251200 Glycine max HOM05D004605 ORTHO05D005804 3.2e-23 112.8 209 37.3
QL02p065873 Quercus lobata HOM05D004605 ORTHO05D005804 3.2e-23 112.8 209 34.9
CiPaw.03G083000 Carya illinoinensis HOM05D004605 ORTHO05D005804 4.2e-23 112.5 212 35.8
CANSAT64G2231 Cannabis sativa HOM05D004605 ORTHO05D005804 5.4e-23 112.1 212 34.0
THA.LOC104805526 Tarenaya hassleriana HOM05D004605 ORTHO05D005804 5.4e-23 112.1 210 36.7
Atru.chr8.648 Acer truncatum HOM05D004605 ORTHO05D005804 7.1e-23 111.7 209 35.9
Os03g0598900 Oryza sativa ssp. japonica HOM05D004605 ORTHO05D005804 9.3e-23 111.3 205 34.6
Sabra17G0086200 Salix brachista HOM05D004605 ORTHO05D005804 1.2e-22 110.9 205 35.1
Zm00001eb219300 Zea mays HOM05D004605 ORTHO05D005804 1.2e-22 110.9 209 34.4
AL7G51520 Arabidopsis lyrata HOM05D004605 ORTHO05D005804 1.6e-22 110.5 203 36.0
Hma1.2p1_0474F.1_g160750 Hydrangea macrophylla HOM05D004605 ORTHO05D005804 2.1e-22 110.2 211 36.0
Potri.017G100000 Populus trichocarpa HOM05D004605 ORTHO05D005804 2.1e-22 110.2 209 35.9
TPR.G23408 Trifolium pratense HOM05D004605 ORTHO05D005804 2.1e-22 110.2 209 36.4
Migut.H00587 Erythranthe guttata HOM05D004605 ORTHO05D005804 2.7e-22 109.8 209 34.9
MD17G1065700 Malus domestica HOM05D004605 ORTHO05D005804 2.7e-22 109.8 211 35.1
Aqoxy3G03715 Aquilegia oxysepala HOM05D004605 ORTHO05D005804 3.5e-22 109.4 218 34.9
Zm00001eb049940 Zea mays HOM05D004605 ORTHO05D005804 4.6e-22 109.0 209 33.5
Aa31LG9G16810 Aethionema arabicum HOM05D004605 ORTHO05D005804 6.0e-22 108.6 210 34.3
BcaB02g07994 Brassica carinata HOM05D004605 ORTHO05D005804 6.0e-22 108.6 208 34.6
CARHR263630 Cardamine hirsuta HOM05D004605 ORTHO05D005804 6.0e-22 108.6 203 35.5
ECA238G2860 Erigeron canadensis HOM05D004605 ORTHO05D005804 6.0e-22 108.6 210 35.7
Manes.02G059400 Manihot esculenta HOM05D004605 ORTHO05D005804 6.0e-22 108.6 209 33.0
Mapoly0001s0057 Marchantia polymorpha HOM05D004605 ORTHO05D005804 6.0e-22 108.6 209 33.0
Actinidia26268 Actinidia chinensis HOM05D004605 ORTHO05D005804 1.0e-21 107.8 211 34.1
C06p18440 Brassica napus HOM05D004605 ORTHO05D005804 1.0e-21 107.8 203 35.5
Cpa.g.sc14.228 Carica papaya HOM05D004605 ORTHO05D005804 1.3e-21 107.5 209 34.9
RcHm_v2.0_Chr2g0164921 Rosa chinensis HOM05D004605 ORTHO05D005804 1.3e-21 107.5 208 34.1
Sp7g03000 Schrenkiella parvula HOM05D004605 ORTHO05D005804 1.3e-21 107.5 208 34.1
MD09G1074300 Malus domestica HOM05D004605 ORTHO05D005804 1.7e-21 107.1 211 34.6
BcaC08g44406 Brassica carinata HOM05D004605 ORTHO05D005804 2.3e-21 106.7 203 34.5
BolC6t37056H Brassica oleracea HOM05D004605 ORTHO05D005804 2.3e-21 106.7 203 34.5
BraA07t29690Z Brassica rapa HOM05D004605 ORTHO05D005804 2.3e-21 106.7 203 35.0
A07p19860 Brassica napus HOM05D004605 ORTHO05D005804 3.0e-21 106.3 203 35.0
FvH4_6g46390 Fragaria vesca HOM05D004605 ORTHO05D005804 3.0e-21 106.3 208 34.1
Lj1g0025970 Lotus japonicus HOM05D004605 ORTHO05D005804 3.0e-21 106.3 208 35.1
HanXRQChr14g0452481 Helianthus annuus HOM05D004605 ORTHO05D005804 3.9e-21 105.9 210 33.8
HPP92_012260 Vanilla planifolia HOM05D004605 ORTHO05D005804 3.9e-21 105.9 211 33.2
Thhalv10027927m.g Eutrema salsugineum HOM05D004605 ORTHO05D005804 5.1e-21 105.5 203 35.0
Prupe.3G249000 Prunus persica HOM05D004605 ORTHO05D005804 5.1e-21 105.5 211 33.2
Aqoxy3G03716 Aquilegia oxysepala HOM05D004605 ORTHO05D005804 8.7e-21 104.8 218 34.9
Carub.0007s3694 Capsella rubella HOM05D004605 ORTHO05D005804 8.7e-21 104.8 204 34.3
Prupe.3G249100 Prunus persica HOM05D004605 ORTHO05D005804 8.7e-21 104.8 212 34.9
Ca_06902_v3 Cicer arietinum L. HOM05D004605 ORTHO05D005804 1.1e-20 104.4 207 34.8
Lalb_Chr10g0092731 Lupinus albus HOM05D004605 ORTHO05D005804 1.1e-20 104.4 206 34.0
Medtr7g016650 Medicago truncatula HOM05D004605 ORTHO05D005804 1.1e-20 104.4 207 34.8
TWI60G1007 Tripterygium wilfordii HOM05D004605 ORTHO05D005804 1.5e-20 104.0 211 32.2
Rhsim08G0077200 Rhododendron simsii HOM05D004605 ORTHO05D005804 2.5e-20 103.2 211 34.1
Manes.01G103400 Manihot esculenta HOM05D004605 ORTHO05D005804 3.3e-20 102.8 210 31.0
Lsat_1_v5_gn_2_90241 Lactuca sativa HOM05D004605 ORTHO05D005804 4.3e-20 102.4 209 32.1
Psat3g203400 Pisum sativum HOM05D004605 ORTHO05D005804 7.3e-20 101.7 207 33.8
AT5G38900 Arabidopsis thaliana HOM05D004605 ORTHO05D005804 1.3e-19 100.9 203 33.0
FAN14G2038 Fragaria x ananassa HOM05D004605 ORTHO05D005804 1.3e-19 100.9 206 32.0
SMO223G0030 Selaginella moellendorffii HOM05D004605 ORTHO05D005804 1.6e-19 100.5 208 33.7
DCAR_021425 Daucus carota HOM05D004605 ORTHO05D005804 2.8e-19 99.8 209 34.9
FAN05G4053 Fragaria x ananassa HOM05D004605 ORTHO05D005804 2.8e-19 99.8 216 33.8
Eucgr.B03744 Eucalyptus grandis HOM05D004605 ORTHO05D005804 3.6e-19 99.4 212 31.6
Eucgr.L00721 Eucalyptus grandis HOM05D004605 ORTHO05D005804 1.4e-18 97.4 202 32.7
Pp3c14_20450 Physcomitrium patens HOM05D004605 ORTHO05D005804 1.4e-18 97.4 210 31.9
EL10Ac2g04442 Beta vulgaris HOM05D004605 ORTHO05D005804 1.8e-18 97.1 209 33.5
Eucgr.I02062 Eucalyptus grandis HOM05D004605 ORTHO05D005804 1.8e-18 97.1 241 30.7
CBR_g36839 Chara braunii HOM05D004605 ORTHO05D005804 6.9e-18 95.1 212 29.7
Sc10g0000600 Simmondsia chinensis HOM05D004605 ORTHO05D005804 6.9e-18 95.1 150 38.7
Cfa025436 Carpinus fangiana HOM05D004605 ORTHO05D005804 1.5e-17 94.0 221 26.7
AUR62023160 Chenopodium quinoa HOM05D004605 ORTHO05D005804 2.6e-17 93.2 202 32.2
Cre12.g553700 Chlamydomonas reinhardtii HOM05D004605 ORTHO05D005804 7.6e-17 91.7 210 28.1
ATR0827G055 Amborella trichopoda HOM05D004605 ORTHO05D005804 9.9e-17 91.3 213 30.0
MSTRG.15436 Avicennia marina HOM05D004605 ORTHO05D005804 4.9e-16 89.0 189 32.3
AUR62024435 Chenopodium quinoa HOM05D004605 ORTHO05D005804 4.9e-16 89.0 145 35.9
SEGI_21234 Sequoiadendron giganteum HOM05D004605 ORTHO05D005804 1.1e-15 87.8 215 28.4
Cc07_g04470 Coffea canephora HOM05D004605 ORTHO05D005804 1.9e-15 87.0 136 37.5
AagrBONN_evm.TU.Sc2ySwM_340.409 Anthoceros agrestis HOM05D004605 ORTHO05D005804 2.4e-15 86.7 195 30.8
FAN02G3403 Fragaria x ananassa HOM05D004605 ORTHO05D005804 2.4e-15 86.7 146 35.6
Cre10.g464500 Chlamydomonas reinhardtii HOM05D004605 ORTHO05D005804 9.3e-15 84.7 224 28.6
Eucgr.L00305 Eucalyptus grandis HOM05D004605 ORTHO05D005804 1.2e-14 84.3 132 40.2
QL02p053766 Quercus lobata HOM05D004605 ORTHO05D005804 2.7e-14 83.2 137 38.0
vmacro18128 Vaccinium macrocarpon HOM05D004605 ORTHO05D005804 2.7e-14 83.2 145 33.1
AUR62009481 Chenopodium quinoa HOM05D004605 ORTHO05D005804 3.9e-13 79.3 202 30.7
Dinv33862 Davidia involucrata HOM05D004605 ORTHO05D005804 6.7e-13 78.6 133 37.6
MBI16_g34534_MAGBIO Magnolia biondii HOM05D004605 ORTHO05D005804 2.5e-12 76.6 152 36.2
SMO270G0021 Selaginella moellendorffii HOM05D004605 ORTHO05D005804 3.3e-12 76.3 215 26.5
FAN09G1153 Fragaria x ananassa HOM05D004605 ORTHO05D005804 7.4e-12 75.1 191 31.4
Mapoly0107s0018 Marchantia polymorpha HOM05D004605 ORTHO05D005804 9.6e-12 74.7 217 25.8
PRCOL_00005781 Prasinoderma coloniale HOM05D053327 ORTHO05D048986 1.6e-11 73.9 165 29.7
RcHm_v2.0_Chr2g0164911 Rosa chinensis HOM05D004605 ORTHO05D005804 3.6e-11 72.8 207 25.1
CDE10G0487 Ceratophyllum demersum HOM05D004605 ORTHO05D005804 1.1e-07 61.2 114 35.1


User provided reference genes

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