Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3s30_306 Physcomitrium patens HOM05D004915 ORTHO05D043763 1.2e-186 656.4 331 100.0
Cfa022485 Carpinus fangiana HOM05D004915 ORTHO05D043763 2.6e-16 90.5 285 28.4
TPR.G33578 Trifolium pratense HOM05D004915 ORTHO05D006048 1.4e-09 68.2 189 30.2
Phvul.008G037200 Phaseolus vulgaris HOM05D004915 ORTHO05D006048 2.4e-09 67.4 189 30.2
TAR622G0868 Trochodendron aralioides HOM05D004915 ORTHO05D006048 5.3e-09 66.2 189 28.0
Potri.017G085100 Populus trichocarpa HOM05D004915 ORTHO05D006048 6.9e-09 65.9 197 26.9
Medtr7g011040 Medicago truncatula HOM05D004915 ORTHO05D006048 9.0e-09 65.5 189 29.1
HanXRQChr09g0247201 Helianthus annuus HOM05D004915 ORTHO05D006048 1.2e-08 65.1 152 31.6
Glyma.09G236600 Glycine max HOM05D004915 ORTHO05D006048 2.0e-08 64.3 195 30.8
HanXRQChr08g0236601 Helianthus annuus HOM05D004915 ORTHO05D006048 2.0e-08 64.3 152 31.6
Nitab4.5_0000121g0120 Nicotiana tabacum HOM05D004915 ORTHO05D006048 2.0e-08 64.3 204 27.0
Solyc06g065310.3 Solanum lycopersicum HOM05D004915 ORTHO05D006048 2.0e-08 64.3 128 33.6
Psat3g200280 Pisum sativum HOM05D004915 ORTHO05D006048 3.4e-08 63.5 189 29.6
arahy.Tifrunner.gnm1.ann1.BYQL86 Arachis hypogaea HOM05D004915 ORTHO05D006048 4.5e-08 63.2 169 29.0
Medtr1g111380 Medicago truncatula HOM05D004915 ORTHO05D006048 4.5e-08 63.2 189 28.6
TPR.G39201 Trifolium pratense HOM05D004915 ORTHO05D006048 4.5e-08 63.2 189 28.6
TAR374G0666 Trochodendron aralioides HOM05D004915 ORTHO05D006048 4.5e-08 63.2 187 27.8
VMungo1383G0755 Vigna mungo HOM05D004915 ORTHO05D006048 4.5e-08 63.2 189 29.6
CAN.G199.5 Capsicum annuum HOM05D004915 ORTHO05D006048 5.8e-08 62.8 128 32.0
QL10p017218 Quercus lobata HOM05D004915 ORTHO05D006048 5.8e-08 62.8 165 27.9
CiPaw.11G045800 Carya illinoinensis HOM05D004915 ORTHO05D006048 7.6e-08 62.4 195 27.2
Aqoxy3G03429 Aquilegia oxysepala HOM05D004915 ORTHO05D006048 1.3e-07 61.6 190 25.8
DCAR_015957 Daucus carota HOM05D004915 ORTHO05D006048 1.3e-07 61.6 192 28.1
Lalb_Chr23g0265041 Lupinus albus HOM05D004915 ORTHO05D006048 1.3e-07 61.6 197 29.9
Nn4g23203 Nelumbo nucifera HOM05D004915 ORTHO05D006048 1.7e-07 61.2 171 28.1
PGR083G1377 Punica granatum HOM05D004915 ORTHO05D006048 2.2e-07 60.8 128 30.5
Sabra17G0075000 Salix brachista HOM05D004915 ORTHO05D006048 2.2e-07 60.8 193 25.4
PGSC0003DMG400026111 Solanum tuberosum HOM05D004915 ORTHO05D006048 2.2e-07 60.8 128 32.0
Sopen06g023800 Solanum pennellii HOM05D004915 ORTHO05D006048 2.9e-07 60.5 128 32.0
Dinv37673 Davidia involucrata HOM05D004915 ORTHO05D006048 3.8e-07 60.1 191 27.2
Prupe.5G195000 Prunus persica HOM05D004915 ORTHO05D006048 3.8e-07 60.1 153 29.4
AUR62018412 Chenopodium quinoa HOM05D004915 ORTHO05D006048 4.9e-07 59.7 150 28.0
Ca_02901_v3 Cicer arietinum L. HOM05D004915 ORTHO05D006048 4.9e-07 59.7 195 28.7
AL5G18870 Arabidopsis lyrata HOM05D004915 ORTHO05D006048 6.4e-07 59.3 190 27.9
Eucgr.B00520 Eucalyptus grandis HOM05D004915 ORTHO05D006048 6.4e-07 59.3 189 25.9
Hma1.2p1_0060F.1_g033670 Hydrangea macrophylla HOM05D004915 ORTHO05D006048 6.4e-07 59.3 128 31.2
Lj5C110T19 Lonicera japonica HOM05D004915 ORTHO05D006048 6.4e-07 59.3 155 29.0
Sed0011950 Sechium edule HOM05D004915 ORTHO05D006048 6.4e-07 59.3 152 29.6
Hund02640 Selenicereus undatus HOM05D004915 ORTHO05D006048 6.4e-07 59.3 166 30.1
ClCG04G012190 Citrullus lanatus HOM05D004915 ORTHO05D006048 8.4e-07 58.9 195 26.7
CsaV3_1G005570 Cucumis sativus L. HOM05D004915 ORTHO05D006048 8.4e-07 58.9 195 27.2
Lsat_1_v5_gn_9_27040 Lactuca sativa HOM05D004915 ORTHO05D006048 8.4e-07 58.9 184 28.3
Migut.L00264 Erythranthe guttata HOM05D004915 ORTHO05D006048 1.1e-06 58.5 127 29.1
GSVIVG01007990001 Vitis vinifera HOM05D004915 ORTHO05D006048 1.1e-06 58.5 165 25.5
AUR62021031 Chenopodium quinoa HOM05D004915 ORTHO05D006048 1.4e-06 58.2 127 29.1
MELO3C001989.2 Cucumis melo HOM05D004915 ORTHO05D006048 1.4e-06 58.2 195 27.2
ECA246G2050 Erigeron canadensis HOM05D004915 ORTHO05D006048 1.4e-06 58.2 152 29.6
FAN10G0297 Fragaria x ananassa HOM05D004915 ORTHO05D006048 1.4e-06 58.2 152 29.6
MD06G1194800 Malus domestica HOM05D004915 ORTHO05D006048 1.4e-06 58.2 152 28.9
ATR0626G227 Amborella trichopoda HOM05D004915 ORTHO05D006048 1.9e-06 57.8 122 32.0
CARHR152100 Cardamine hirsuta HOM05D004915 ORTHO05D006048 1.9e-06 57.8 171 26.9
COL.COLO4_22946 Corchorus olitorius HOM05D004915 ORTHO05D006048 1.9e-06 57.8 216 24.1
MBI05_g33757_MAGBIO Magnolia biondii HOM05D004915 ORTHO05D006048 1.9e-06 57.8 166 28.3
Peaxi162Scf00106g00016 Petunia axillaris HOM05D004915 ORTHO05D006048 1.9e-06 57.8 251 26.7
Peaxi162Scf00241g00416 Petunia axillaris HOM05D004915 ORTHO05D006048 1.9e-06 57.8 189 25.4
Aa31LG9G16420 Aethionema arabicum HOM05D004915 ORTHO05D006048 2.4e-06 57.4 186 26.3
CSS0019190 Camellia sinensis var. sinensis HOM05D004915 ORTHO05D006048 2.4e-06 57.4 195 26.2
Cfa018930 Carpinus fangiana HOM05D004915 ORTHO05D006048 2.4e-06 57.4 166 25.9
Cc04_g16470 Coffea canephora HOM05D004915 ORTHO05D006048 3.2e-06 57.0 154 26.6
FAN03G1016 Fragaria x ananassa HOM05D004915 ORTHO05D006048 3.2e-06 57.0 152 27.6
Thecc.03G090400 Theobroma cacao HOM05D004915 ORTHO05D006048 3.2e-06 57.0 229 25.8
Carub.0007s3626 Capsella rubella HOM05D004915 ORTHO05D006048 4.2e-06 56.6 204 25.5
FvH4_7g07490 Fragaria vesca HOM05D004915 ORTHO05D006048 4.2e-06 56.6 195 25.1
Lj1g0024391 Lotus japonicus HOM05D004915 ORTHO05D006048 4.2e-06 56.6 195 29.7
Oeu058311.1 Olea europaea HOM05D004915 ORTHO05D006048 4.2e-06 56.6 186 24.7
SGA_v2.0_scaffold17G08101 Striga asiatica HOM05D004915 ORTHO05D006048 4.2e-06 56.6 127 29.1
TWI34G1631 Tripterygium wilfordii HOM05D004915 ORTHO05D006048 4.2e-06 56.6 195 26.2
EL10Ac3g07299 Beta vulgaris HOM05D004915 ORTHO05D006048 5.4e-06 56.2 242 25.2
CANSAT56G1541 Cannabis sativa HOM05D004915 ORTHO05D006048 5.4e-06 56.2 128 28.1
FAN13G2234 Fragaria x ananassa HOM05D004915 ORTHO05D006048 7.1e-06 55.8 198 25.8
RcHm_v2.0_Chr7g0181591 Rosa chinensis HOM05D004915 ORTHO05D006048 7.1e-06 55.8 171 25.1
MD14G1201800 Malus domestica HOM05D004915 ORTHO05D006048 9.3e-06 55.5 128 28.9
PSO478G3309 Papaver somniferum HOM05D004915 ORTHO05D006048 9.3e-06 55.5 130 29.2
Rhsim08G0070400 Rhododendron simsii HOM05D004915 ORTHO05D006048 9.3e-06 55.5 190 25.3


User provided reference genes

Program Settings