Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c9_8480 Physcomitrium patens HOM05D006925 ORTHO05D008830 4.3e-158 561.2 274 100.0
Pp3c15_4340 Physcomitrium patens HOM05D006925 ORTHO05D008830 5.3e-132 474.6 274 83.9
Mapoly0001s0380 Marchantia polymorpha HOM05D006925 ORTHO05D008830 2.1e-96 356.3 261 66.3
Gohir.D10G082800 Gossypium hirsutum HOM05D006925 ORTHO05D008830 1.5e-81 307.0 281 55.9
MD15G1445500 Malus domestica HOM05D006925 ORTHO05D008830 1.5e-81 307.0 268 56.3
Prupe.1G587400 Prunus persica HOM05D006925 ORTHO05D008830 1.9e-81 306.6 273 54.9
Gorai.011G089700 Gossypium raimondii HOM05D006925 ORTHO05D008830 2.5e-81 306.2 250 60.4
ATR1089G139 Amborella trichopoda HOM05D006925 ORTHO05D008830 2.1e-80 303.1 249 59.0
Migut.B00701 Erythranthe guttata HOM05D006925 ORTHO05D008830 3.6e-80 302.4 245 60.4
arahy.Tifrunner.gnm1.ann1.MTF64G Arachis hypogaea HOM05D006925 ORTHO05D008830 4.7e-80 302.0 253 58.5
MBI06_g17054_MAGBIO Magnolia biondii HOM05D006925 ORTHO05D008830 4.7e-80 302.0 262 56.5
arahy.Tifrunner.gnm1.ann1.EDE5FN Arachis hypogaea HOM05D006925 ORTHO05D008830 8.0e-80 301.2 249 58.6
Ah.02g128580 Amaranthus hybridus HOM05D006925 ORTHO05D008830 1.8e-79 300.1 265 55.8
CANSAT01G0563 Cannabis sativa HOM05D006925 ORTHO05D008830 1.8e-79 300.1 277 53.8
MSTRG.16455 Avicennia marina HOM05D006925 ORTHO05D008830 2.3e-79 299.7 274 55.8
THA.LOC104824095 Tarenaya hassleriana HOM05D006925 ORTHO05D008830 3.1e-79 299.3 244 58.6
Sabra03G0019700 Salix brachista HOM05D006925 ORTHO05D000812 4.0e-79 298.9 253 58.1
CSS0004280 Camellia sinensis var. sinensis HOM05D006925 ORTHO05D008830 5.2e-79 298.5 251 58.2
CSS0028149 Camellia sinensis var. sinensis HOM05D006925 ORTHO05D008830 5.2e-79 298.5 251 58.2
ClCG10G007640 Citrullus lanatus HOM05D006925 ORTHO05D008830 5.2e-79 298.5 245 59.2
PGSC0003DMG400003436 Solanum tuberosum HOM05D006925 ORTHO05D008830 5.2e-79 298.5 251 59.8
Dinv30983 Davidia involucrata HOM05D006925 ORTHO05D008830 6.8e-79 298.1 244 59.0
Lalb_Chr07g0176851 Lupinus albus HOM05D006925 ORTHO05D008830 6.8e-79 298.1 259 56.4
Duzib160G0166 Durio zibethinus HOM05D006925 ORTHO05D008830 8.9e-79 297.7 264 55.7
TWI14G0460 Tripterygium wilfordii HOM05D006925 ORTHO05D008830 1.2e-78 297.4 278 54.7
GSVIVG01023121001 Vitis vinifera HOM05D006925 ORTHO05D008830 1.5e-78 297.0 275 54.2
Nitab4.5_0002274g0030 Nicotiana tabacum HOM05D006925 ORTHO05D008830 2.6e-78 296.2 265 55.8
RcHm_v2.0_Chr7g0218321 Rosa chinensis HOM05D006925 ORTHO05D008830 2.6e-78 296.2 267 55.4
Sopen10g013620 Solanum pennellii HOM05D006925 ORTHO05D008830 2.6e-78 296.2 251 59.4
CDE05G0936 Ceratophyllum demersum HOM05D006925 ORTHO05D008830 4.4e-78 295.4 260 55.0
Aqoxy5G01835 Aquilegia oxysepala HOM05D006925 ORTHO05D008830 9.8e-78 294.3 272 55.9
BcaC06g31233 Brassica carinata HOM05D006925 ORTHO05D008830 9.8e-78 294.3 256 58.2
DCAR_004828 Daucus carota HOM05D006925 ORTHO05D008830 9.8e-78 294.3 263 56.3
HanXRQChr03g0071141 Helianthus annuus HOM05D006925 ORTHO05D008830 9.8e-78 294.3 264 56.8
PGR042G2053 Punica granatum HOM05D006925 ORTHO05D008830 9.8e-78 294.3 252 57.1
SMO358G0233 Selaginella moellendorffii HOM05D006925 ORTHO05D008830 9.8e-78 294.3 245 58.4
AL5G11640 Arabidopsis lyrata HOM05D006925 ORTHO05D008830 1.7e-77 293.5 276 54.7
CsaV3_3G006780 Cucumis sativus L. HOM05D006925 ORTHO05D008830 1.7e-77 293.5 240 58.3
Solyc10g044840.2 Solanum lycopersicum HOM05D006925 ORTHO05D008830 1.7e-77 293.5 251 59.0
QL02p103778 Quercus lobata HOM05D006925 ORTHO05D008830 2.9e-77 292.7 244 58.2
CAN.G402.4 Capsicum annuum HOM05D006925 ORTHO05D008830 4.9e-77 292.0 251 58.2
Actinidia00135 Actinidia chinensis HOM05D006925 ORTHO05D008830 6.4e-77 291.6 244 58.2
unitig_8.g4519 Utricularia gibba HOM05D006925 ORTHO05D008830 6.4e-77 291.6 277 53.4
PSO210G4845 Papaver somniferum HOM05D006925 ORTHO05D008830 8.3e-77 291.2 261 55.6
ECA248G0237 Erigeron canadensis HOM05D002199 ORTHO05D007829 1.1e-76 290.8 245 59.6
Sp2g13680 Schrenkiella parvula HOM05D006925 ORTHO05D008830 1.4e-76 290.4 269 54.6
BcaC06g34054 Brassica carinata HOM05D006925 ORTHO05D008830 1.9e-76 290.0 270 55.6
C07p33220 Brassica napus HOM05D006925 ORTHO05D008830 1.9e-76 290.0 270 55.6
BolC7t43833H Brassica oleracea HOM05D006925 ORTHO05D008830 1.9e-76 290.0 270 55.6
Cfa004416 Carpinus fangiana HOM05D006925 ORTHO05D008830 1.9e-76 290.0 244 58.2
CiPaw.05G000400 Carya illinoinensis HOM05D006925 ORTHO05D008830 1.9e-76 290.0 244 57.0
VMungo1215G1006 Vigna mungo HOM05D006925 ORTHO05D008830 2.4e-76 289.7 263 55.5
Cc02_g23820 Coffea canephora HOM05D006925 ORTHO05D008830 3.2e-76 289.3 252 56.7
Potri.003G046600 Populus trichocarpa HOM05D006925 ORTHO05D008830 4.1e-76 288.9 253 55.3
Glyma.07G271000 Glycine max HOM05D006925 ORTHO05D008830 7.0e-76 288.1 260 55.8
Hma1.2p1_0157F.1_g069250 Hydrangea macrophylla HOM05D006925 ORTHO05D008830 9.2e-76 287.7 265 54.3
A06p43640 Brassica napus HOM05D006925 ORTHO05D008830 1.2e-75 287.3 273 54.6
BraA06t27246Z Brassica rapa HOM05D006925 ORTHO05D008830 1.2e-75 287.3 273 54.6
COL.COLO4_31098 Corchorus olitorius HOM05D006925 ORTHO05D008830 1.6e-75 287.0 241 58.5
FAN08G3037 Fragaria x ananassa HOM05D006925 ORTHO05D008830 1.0e-74 284.3 240 58.3
FAN18G1352 Fragaria x ananassa HOM05D006925 ORTHO05D008830 1.0e-74 284.3 240 58.3
Lj4g0023352 Lotus japonicus HOM05D006925 ORTHO05D008830 1.3e-74 283.9 253 57.7
FvH4_5g27220 Fragaria vesca HOM05D006925 ORTHO05D008830 2.3e-74 283.1 240 58.3
Nn5g27113 Nelumbo nucifera HOM05D006925 ORTHO05D008830 1.5e-73 280.4 224 59.8
Peaxi162Scf00055g00018 Petunia axillaris HOM05D006925 ORTHO05D008830 1.5e-73 280.4 276 52.9
Haze_09956 Corylus avellana HOM05D006925 ORTHO05D008830 2.8e-72 276.2 260 54.2
Gohir.A10G068400 Gossypium hirsutum HOM05D006925 ORTHO05D008830 6.2e-72 275.0 221 60.2
Lsat_1_v5_gn_7_69720 Lactuca sativa HOM05D006925 ORTHO05D008830 5.8e-70 268.5 292 51.4
Medtr4g134410 Medicago truncatula HOM05D006925 ORTHO05D008830 5.8e-70 268.5 247 55.1
AagrBONN_evm.TU.Sc2ySwM_369.585 Anthoceros agrestis HOM05D006925 ORTHO05D008830 1.3e-69 267.3 228 57.5
Thhalv10004663m.g Eutrema salsugineum HOM05D006925 ORTHO05D008830 1.3e-69 267.3 216 61.1
Aa31LG2G7670 Aethionema arabicum HOM05D006925 ORTHO05D008830 9.2e-68 261.2 245 53.5
HPP92_001204 Vanilla planifolia HOM05D006925 ORTHO05D008830 9.2e-68 261.2 242 52.9
Psat4g001760 Pisum sativum HOM05D006925 ORTHO05D008830 6.0e-67 258.5 254 52.4
Carub.0005s0146 Capsella rubella HOM05D006925 ORTHO05D008830 1.7e-66 256.9 213 57.7
Thecc.06G062200 Theobroma cacao HOM05D006925 ORTHO05D008830 6.6e-66 255.0 235 53.6
FAN13G1230 Fragaria x ananassa HOM05D006925 ORTHO05D008830 4.3e-65 252.3 258 51.6
Eucgr.G00053 Eucalyptus grandis HOM05D006925 ORTHO05D008830 1.6e-64 250.4 214 56.1
Phvul.003G090400 Phaseolus vulgaris HOM05D006925 ORTHO05D008830 2.1e-64 250.0 199 61.8
Sc03g0005610 Simmondsia chinensis HOM05D006925 ORTHO05D008830 6.2e-64 248.4 201 58.7
SGA_v2.0_scaffold254G45226 Striga asiatica HOM05D006925 ORTHO05D008830 2.4e-63 246.5 337 41.5
Ca_13518_v3 Cicer arietinum L. HOM05D006925 ORTHO05D008830 3.1e-63 246.1 217 56.2
Nitab4.5_0000288g0050 Nicotiana tabacum HOM05D006925 ORTHO05D008830 5.2e-63 245.4 265 48.7
TPR.G5931 Trifolium pratense HOM05D006925 ORTHO05D008830 1.2e-62 244.2 239 54.0
Sed0012673 Sechium edule HOM05D006925 ORTHO05D008830 2.6e-62 243.0 195 60.5
Manes.06G015100 Manihot esculenta HOM05D006925 ORTHO05D008830 3.8e-61 239.2 194 59.3
Lj5A307T31 Lonicera japonica HOM05D006925 ORTHO05D008830 4.9e-61 238.8 254 49.2
AUR62032491 Chenopodium quinoa HOM05D006925 ORTHO05D008830 6.4e-61 238.4 195 60.5
EL10Ac6g13952 Beta vulgaris HOM05D006925 ORTHO05D008830 8.6e-58 228.0 258 47.7
AUR62040119 Chenopodium quinoa HOM05D006925 ORTHO05D008830 2.5e-57 226.5 242 51.2
Hund15314 Selenicereus undatus HOM05D006925 ORTHO05D008830 3.6e-56 222.6 194 58.2
SEGI_06138 Sequoiadendron giganteum HOM05D006925 ORTHO05D008830 6.2e-56 221.9 252 48.4
vmacro01630 Vaccinium macrocarpon HOM05D006925 ORTHO05D008830 6.9e-55 218.4 190 55.8
Zm00001eb064090 Zea mays HOM05D006925 ORTHO05D008830 3.8e-53 212.6 182 55.5
MELO3C016443.2 Cucumis melo HOM05D006925 ORTHO05D008830 9.3e-52 208.0 167 59.3
CARHR144990 Cardamine hirsuta HOM05D006925 ORTHO05D008830 9.6e-49 198.0 172 57.6
TAR628G1169 Trochodendron aralioides HOM05D006925 ORTHO05D008830 8.1e-48 194.9 157 58.6
AT2G02410 Arabidopsis thaliana HOM05D006925 ORTHO05D008830 1.3e-45 187.6 219 48.4
Ciclev10003645m.g Citrus clementina HOM05D006925 ORTHO05D008830 3.2e-36 156.4 125 59.2
Sabra03G0019900 Salix brachista HOM05D006925 ORTHO05D008830 2.1e-35 153.7 197 44.7
Rhsim11G0114700 Rhododendron simsii HOM05D006925 ORTHO05D008830 2.0e-30 137.1 228 38.2
SMO201G0205 Selaginella moellendorffii HOM05D006925 ORTHO05D008830 3.8e-29 132.9 108 58.3
CBR_g49407 Chara braunii HOM05D000019 ORTHO05D000002 1.6e-24 117.5 121 52.1
Os03g0843200 Oryza sativa ssp. japonica HOM05D006925 ORTHO05D008830 5.9e-22 109.0 103 50.5
SMO199G0001 Selaginella moellendorffii HOM05D006925 ORTHO05D008830 1.1e-20 104.8 107 50.5
Glyma.17G002900 Glycine max HOM05D006925 ORTHO05D008830 1.4e-20 104.4 86 54.7
AL5G11650 Arabidopsis lyrata HOM05D006925 ORTHO05D008830 2.7e-19 100.1 86 54.7
SEGI_30664 Sequoiadendron giganteum HOM05D006925 ORTHO05D008830 2.5e-17 93.6 125 43.2
PRCOL_00002508 Prasinoderma coloniale HOM05D006925 ORTHO05D008830 4.1e-15 86.3 160 34.4
TAR628G1563 Trochodendron aralioides HOM05D006925 ORTHO05D008830 5.9e-14 82.4 57 63.2
Oeu016658.1 Olea europaea HOM05D006925 ORTHO05D008830 3.6e-11 73.2 68 52.9
Glyma.20G064100 Glycine max HOM05D006925 ORTHO05D008830 4.4e-09 66.2 62 48.4
Oeu016657.1 Olea europaea HOM05D006925 ORTHO05D008830 3.1e-07 60.1 57 49.1
vmacro01629 Vaccinium macrocarpon HOM05D006925 ORTHO05D008830 9.1e-07 58.5 50 52.0
CBR_g46374 Chara braunii HOM05D000019 ORTHO05D000353 1.2e-06 58.2 47 55.3


User provided reference genes

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