Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c9_7780 Physcomitrium patens HOM05D023949 ORTHO05D000739 1.4e-128 463.0 232 100.0
Pp3c15_8180 Physcomitrium patens HOM05D023949 ORTHO05D000739 8.4e-38 161.4 180 49.4
Pp3c7_13100 Physcomitrium patens HOM05D023949 ORTHO05D000739 1.8e-32 143.7 130 52.3
Pp3c2_23870 Physcomitrium patens HOM05D023949 ORTHO05D000739 7.6e-31 138.3 132 50.8
Pp3c11_1560 Physcomitrium patens HOM05D023949 ORTHO05D000739 1.0e-27 127.9 160 44.4
Pp3c2_20180 Physcomitrium patens HOM05D001109 ORTHO05D001051 1.8e-11 73.9 136 33.8
Pp3c14_12090 Physcomitrium patens HOM05D001109 ORTHO05D001051 6.7e-11 72.0 159 33.3
Pp3c18_18670 Physcomitrium patens HOM05D000865 ORTHO05D000739 2.6e-10 70.1 157 29.3
QL12p030209 Quercus lobata HOM05D000865 ORTHO05D000739 3.3e-10 69.7 184 31.5
Mapoly0005s0112 Marchantia polymorpha HOM05D001109 ORTHO05D000739 5.7e-10 68.9 145 31.7
Mapoly0005s0113 Marchantia polymorpha HOM05D001109 ORTHO05D000739 5.7e-10 68.9 145 31.7
Duzib160G0840 Durio zibethinus HOM05D001109 ORTHO05D011777 7.4e-10 68.6 156 27.6
Gohir.A08G221618 Gossypium hirsutum HOM05D001109 ORTHO05D001051 7.4e-10 68.6 145 32.4
Duzib106G0960 Durio zibethinus HOM05D001109 ORTHO05D001051 9.7e-10 68.2 207 29.0
ECA234G3673 Erigeron canadensis HOM05D001109 ORTHO05D001051 9.7e-10 68.2 137 31.4
Duzib128G1097 Durio zibethinus HOM05D001109 ORTHO05D001051 1.7e-09 67.4 173 29.5
FAN16G1055 Fragaria x ananassa HOM05D001109 ORTHO05D011777 2.8e-09 66.6 131 31.3
MD05G1286300 Malus domestica HOM05D001109 ORTHO05D011777 3.7e-09 66.2 130 30.0
Phvul.003G104400 Phaseolus vulgaris HOM05D000865 ORTHO05D000739 3.7e-09 66.2 182 30.8
SMO356G0014 Selaginella moellendorffii HOM05D001109 ORTHO05D001051 3.7e-09 66.2 131 33.6
vmacro20871 Vaccinium macrocarpon HOM05D001109 ORTHO05D001051 3.7e-09 66.2 138 30.4
Duzib268G1206 Durio zibethinus HOM05D001109 ORTHO05D001051 4.8e-09 65.9 126 33.3
FvH4_3g05810 Fragaria vesca HOM05D001109 ORTHO05D011777 4.8e-09 65.9 131 29.8
TAR626G0001 Trochodendron aralioides HOM05D001109 ORTHO05D011777 4.8e-09 65.9 129 30.2
AagrBONN_evm.TU.Sc2ySwM_362.737 Anthoceros agrestis HOM05D001109 ORTHO05D001051 6.3e-09 65.5 134 30.6
Pp3c21_12250 Physcomitrium patens HOM05D001109 ORTHO05D000739 1.1e-08 64.7 189 28.6
Lj2C45T9 Lonicera japonica HOM05D001109 ORTHO05D001051 1.8e-08 63.9 139 27.3
RcHm_v2.0_Chr5g0013681 Rosa chinensis HOM05D001109 ORTHO05D011777 1.8e-08 63.9 131 29.8
Aqoxy2G03021 Aquilegia oxysepala HOM05D000865 ORTHO05D000739 3.1e-08 63.2 159 30.8
Gohir.D06G198600 Gossypium hirsutum HOM05D001109 ORTHO05D001051 4.1e-08 62.8 223 25.6
Peaxi162Scf00037g00096 Petunia axillaris HOM05D000865 ORTHO05D000739 4.1e-08 62.8 164 26.8
Prupe.4G078600 Prunus persica HOM05D001109 ORTHO05D011777 4.1e-08 62.8 130 30.0
Dinv43883 Davidia involucrata HOM05D003005 ORTHO05D004170 7.0e-08 62.0 138 28.3
Duzib138G0142 Durio zibethinus HOM05D001109 ORTHO05D001051 7.0e-08 62.0 126 31.7
Gorai.004G249500 Gossypium raimondii HOM05D001109 ORTHO05D001051 7.0e-08 62.0 156 28.8
Hma1.2p1_0384F.1_g140860 Hydrangea macrophylla HOM05D001109 ORTHO05D001051 7.0e-08 62.0 139 30.9
Lsat_1_v5_gn_4_34140 Lactuca sativa HOM05D001109 ORTHO05D001051 7.0e-08 62.0 130 34.6
Lj8P197T23 Lonicera japonica HOM05D001109 ORTHO05D001051 7.0e-08 62.0 137 27.7
Zm00001eb285340 Zea mays HOM05D000865 ORTHO05D000739 7.0e-08 62.0 166 29.5
Duzib106G0605 Durio zibethinus HOM05D001109 ORTHO05D001051 9.1e-08 61.6 207 28.0
Gohir.A08G217700 Gossypium hirsutum HOM05D001109 ORTHO05D001051 9.1e-08 61.6 157 28.7
Gorai.004G254600 Gossypium raimondii HOM05D001109 ORTHO05D001051 9.1e-08 61.6 220 26.8
HanXRQChr17g0561051 Helianthus annuus HOM05D001109 ORTHO05D001051 9.1e-08 61.6 133 33.8
MapolyY_B0012 Marchantia polymorpha HOM05D001109 ORTHO05D002316 9.1e-08 61.6 131 29.0
Oeu004922.1 Olea europaea HOM05D001109 ORTHO05D001051 9.1e-08 61.6 141 29.1
AagrBONN_evm.TU.Sc2ySwM_362.792 Anthoceros agrestis HOM05D001109 ORTHO05D002316 1.2e-07 61.2 176 27.8
vmacro10380 Vaccinium macrocarpon HOM05D001109 ORTHO05D001051 1.2e-07 61.2 168 29.2
CSS0011580 Camellia sinensis var. sinensis HOM05D001109 ORTHO05D001051 1.5e-07 60.8 133 30.1
CAN.G1652.15 Capsicum annuum HOM05D000865 ORTHO05D000739 1.5e-07 60.8 165 29.7
Haze_05574 Corylus avellana HOM05D001109 ORTHO05D011777 1.5e-07 60.8 146 27.4
Gohir.D08G234700 Gossypium hirsutum HOM05D001109 ORTHO05D001051 1.5e-07 60.8 156 28.2
Ca_10023_v3 Cicer arietinum L. HOM05D001109 ORTHO05D001051 2.0e-07 60.5 133 30.8
Gorai.010G231500 Gossypium raimondii HOM05D001109 ORTHO05D001051 2.0e-07 60.5 223 25.1
DCAR_030533 Daucus carota HOM05D000865 ORTHO05D000739 2.6e-07 60.1 186 29.0
Gohir.D12G113100 Gossypium hirsutum HOM05D001109 ORTHO05D001051 2.6e-07 60.1 150 26.7
MBI19_g13126_MAGBIO Magnolia biondii HOM05D000865 ORTHO05D000739 2.6e-07 60.1 170 25.9
Potri.010G024200 Populus trichocarpa HOM05D000865 ORTHO05D000739 2.6e-07 60.1 189 28.0
SMO340G0080 Selaginella moellendorffii HOM05D001109 ORTHO05D001051 3.4e-07 59.7 133 30.8
Thecc.01G349500 Theobroma cacao HOM05D001109 ORTHO05D001051 3.4e-07 59.7 131 30.5
Ah.04g153750 Amaranthus hybridus HOM05D001109 ORTHO05D001051 4.5e-07 59.3 136 27.9
Dinv32272 Davidia involucrata HOM05D001109 ORTHO05D011777 4.5e-07 59.3 129 26.4
Gohir.A12G110100 Gossypium hirsutum HOM05D001109 ORTHO05D001051 4.5e-07 59.3 150 26.7
Lalb_Chr21g0311141 Lupinus albus HOM05D001109 ORTHO05D001051 4.5e-07 59.3 136 30.1
Gorai.008G122700 Gossypium raimondii HOM05D001109 ORTHO05D001051 5.9e-07 58.9 150 26.7
SEGI_26923 Sequoiadendron giganteum HOM05D001109 ORTHO05D001051 5.9e-07 58.9 173 26.0
Lalb_Chr02g0149011 Lupinus albus HOM05D001109 ORTHO05D001051 7.7e-07 58.5 136 29.4
PSO591G0270 Papaver somniferum HOM05D000865 ORTHO05D000739 7.7e-07 58.5 130 30.0
Atru.chr2.1058 Acer truncatum HOM05D001109 ORTHO05D001051 1.0e-06 58.2 135 30.4
CiPaw.08G101400 Carya illinoinensis HOM05D000865 ORTHO05D000739 1.3e-06 57.8 161 28.6
Duzib151G1190 Durio zibethinus HOM05D000865 ORTHO05D000739 1.3e-06 57.8 135 28.1
Gohir.D05G152100 Gossypium hirsutum HOM05D001109 ORTHO05D011777 1.3e-06 57.8 130 27.7
Nitab4.5_0014335g0010 Nicotiana tabacum HOM05D000865 ORTHO05D000739 1.3e-06 57.8 182 27.5
PSO832G1537 Papaver somniferum HOM05D000865 ORTHO05D000739 1.3e-06 57.8 130 30.0
PGSC0003DMG400024703 Solanum tuberosum HOM05D000865 ORTHO05D000739 1.3e-06 57.8 159 27.7
Gohir.D11G309700 Gossypium hirsutum HOM05D000865 ORTHO05D000739 1.7e-06 57.4 129 30.2
Gorai.007G341700 Gossypium raimondii HOM05D000865 ORTHO05D000739 1.7e-06 57.4 129 30.2
Lalb_Chr04g0262131 Lupinus albus HOM05D001109 ORTHO05D001051 1.7e-06 57.4 135 30.4
Medtr1g080360 Medicago truncatula HOM05D001109 ORTHO05D001051 1.7e-06 57.4 133 28.6
CSS0025346 Camellia sinensis var. sinensis HOM05D000865 ORTHO05D000739 2.2e-06 57.0 170 27.6
CiPaw.02G083700 Carya illinoinensis HOM05D000865 ORTHO05D000739 2.2e-06 57.0 161 28.0
VMungo0720G1348 Vigna mungo HOM05D001109 ORTHO05D001051 2.2e-06 57.0 194 27.3
Glyma.10G165300 Glycine max HOM05D001109 ORTHO05D001051 2.9e-06 56.6 196 27.0
Lj2C45T1 Lonicera japonica HOM05D001109 ORTHO05D001051 2.9e-06 56.6 134 27.6
Potri.019G021300 Populus trichocarpa HOM05D001109 ORTHO05D001051 2.9e-06 56.6 133 28.6
Rhsim01G0168900 Rhododendron simsii HOM05D001109 ORTHO05D001051 2.9e-06 56.6 133 31.6
Cfa006376 Carpinus fangiana HOM05D001109 ORTHO05D001051 3.8e-06 56.2 198 25.8
Glyma.03G249700 Glycine max HOM05D001109 ORTHO05D001051 3.8e-06 56.2 133 29.3
Hma1.2p1_1336F.1_g276460 Hydrangea macrophylla HOM05D001109 ORTHO05D001051 3.8e-06 56.2 199 25.6
Lj5g0018572 Lotus japonicus HOM05D001109 ORTHO05D001051 3.8e-06 56.2 132 30.3
ATR1131G044 Amborella trichopoda HOM05D001109 ORTHO05D001051 5.0e-06 55.8 141 29.1
Psat0s3161g0120 Pisum sativum HOM05D001109 ORTHO05D001051 5.0e-06 55.8 164 25.6
TPR.G6948 Trifolium pratense HOM05D001109 ORTHO05D001051 5.0e-06 55.8 164 25.0
COL.COLO4_10495 Corchorus olitorius HOM05D000865 ORTHO05D000739 6.5e-06 55.5 138 31.9
Sed0014258 Sechium edule HOM05D000865 ORTHO05D000739 6.5e-06 55.5 138 29.7
THA.LOC104826528 Tarenaya hassleriana HOM05D001109 ORTHO05D001051 6.5e-06 55.5 191 27.2
MELO3C006656.2 Cucumis melo HOM05D000865 ORTHO05D000739 8.5e-06 55.1 91 31.9


User provided reference genes

Program Settings