Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c9_6630 Physcomitrium patens HOM05D006610 ORTHO05D008447 1.7e-117 426.0 219 100.0
AagrBONN_evm.TU.Sc2ySwM_369.589 Anthoceros agrestis HOM05D006610 ORTHO05D008447 4.2e-55 218.8 151 74.8
Actinidia28724 Actinidia chinensis HOM05D006610 ORTHO05D008447 7.4e-52 208.0 156 64.7
Manes.02G109300 Manihot esculenta HOM05D006610 ORTHO05D008447 9.7e-52 207.6 156 64.7
Solyc02g083500.3 Solanum lycopersicum HOM05D006610 ORTHO05D008447 9.7e-52 207.6 168 57.1
CSS0043605 Camellia sinensis var. sinensis HOM05D006610 ORTHO05D008447 1.3e-51 207.2 152 65.8
TAR186G0001 Trochodendron aralioides HOM05D006610 ORTHO05D008447 1.3e-51 207.2 156 65.4
AUR62003705 Chenopodium quinoa HOM05D006610 ORTHO05D008447 6.3e-51 204.9 154 66.9
CSS0036095 Camellia sinensis var. sinensis HOM05D006610 ORTHO05D008447 1.4e-50 203.8 156 64.7
CAN.G890.6 Capsicum annuum HOM05D006610 ORTHO05D008447 1.4e-50 203.8 167 58.1
Sopen02g028290 Solanum pennellii HOM05D006610 ORTHO05D008447 1.4e-50 203.8 168 56.5
HanXRQChr16g0531751 Helianthus annuus HOM05D006610 ORTHO05D008447 1.8e-50 203.4 157 62.4
AUR62018012 Chenopodium quinoa HOM05D006610 ORTHO05D008447 2.4e-50 203.0 159 64.8
SGA_v2.0_scaffold49G18127 Striga asiatica HOM05D006610 ORTHO05D008447 2.4e-50 203.0 193 54.9
GSVIVG01007223001 Vitis vinifera HOM05D006610 ORTHO05D008447 2.4e-50 203.0 179 59.2
ECA246G3062 Erigeron canadensis HOM05D006610 ORTHO05D008447 3.1e-50 202.6 152 64.5
Rhsim08G0031200 Rhododendron simsii HOM05D006610 ORTHO05D008447 3.1e-50 202.6 150 66.0
PGSC0003DMG400003653 Solanum tuberosum HOM05D006610 ORTHO05D008447 3.1e-50 202.6 158 60.1
TWI09G0665 Tripterygium wilfordii HOM05D006610 ORTHO05D008447 3.1e-50 202.6 159 62.9
Cc07_g11190 Coffea canephora HOM05D006610 ORTHO05D008447 1.5e-49 200.3 139 70.5
Atru.chr3.883 Acer truncatum HOM05D006610 ORTHO05D008447 2.0e-49 199.9 156 62.2
Atru.chr3.894 Acer truncatum HOM05D006610 ORTHO05D008447 2.0e-49 199.9 156 62.2
Nitab4.5_0001789g0060 Nicotiana tabacum HOM05D006610 ORTHO05D008447 2.0e-49 199.9 158 59.5
Nitab4.5_0008552g0010 Nicotiana tabacum HOM05D006610 ORTHO05D008447 2.0e-49 199.9 158 59.5
PGR119G0279 Punica granatum HOM05D006610 ORTHO05D008447 2.0e-49 199.9 160 59.4
COL.COLO4_22482 Corchorus olitorius HOM05D006610 ORTHO05D008447 2.6e-49 199.5 160 60.6
Sabra05G0089400 Salix brachista HOM05D006610 ORTHO05D008447 4.5e-49 198.7 156 60.9
vmacro18433 Vaccinium macrocarpon HOM05D006610 ORTHO05D008447 4.5e-49 198.7 151 63.6
Prupe.7G173500 Prunus persica HOM05D006610 ORTHO05D008447 5.9e-49 198.4 154 62.3
Potri.005G109100 Populus trichocarpa HOM05D006610 ORTHO05D008447 7.7e-49 198.0 152 62.5
RcHm_v2.0_Chr2g0098651 Rosa chinensis HOM05D006610 ORTHO05D008447 7.7e-49 198.0 178 59.0
EL10Ac6g15167 Beta vulgaris HOM05D006610 ORTHO05D008447 1.0e-48 197.6 165 58.2
Gohir.A02G173500 Gossypium hirsutum HOM05D006610 ORTHO05D008447 1.0e-48 197.6 191 53.9
Gohir.D03G006400 Gossypium hirsutum HOM05D006610 ORTHO05D008447 1.0e-48 197.6 152 63.2
Sp2g30600 Schrenkiella parvula HOM05D006610 ORTHO05D008447 1.0e-48 197.6 157 64.3
arahy.Tifrunner.gnm1.ann1.M7YZEH Arachis hypogaea HOM05D006610 ORTHO05D008447 1.3e-48 197.2 156 60.3
Lj4A224G29 Lonicera japonica HOM05D006610 ORTHO05D008447 1.3e-48 197.2 151 62.9
Lj4g0021807 Lotus japonicus HOM05D006610 ORTHO05D008447 1.3e-48 197.2 161 59.0
SEGI_37776 Sequoiadendron giganteum HOM05D006610 ORTHO05D008447 1.3e-48 197.2 152 61.2
VMungo0251G0375 Vigna mungo HOM05D006610 ORTHO05D008447 1.3e-48 197.2 186 54.3
ATR0180G027 Amborella trichopoda HOM05D006610 ORTHO05D008447 1.7e-48 196.8 149 65.1
Cpa.g.sc6.302 Carica papaya HOM05D006610 ORTHO05D008447 1.7e-48 196.8 181 56.4
CDE02G2830 Ceratophyllum demersum HOM05D006610 ORTHO05D008447 1.7e-48 196.8 160 63.1
AUR62034480 Chenopodium quinoa HOM05D006610 ORTHO05D008447 2.2e-48 196.4 137 68.6
MD02G1124800 Malus domestica HOM05D006610 ORTHO05D008447 2.2e-48 196.4 175 57.7
Peaxi162Scf00328g00315 Petunia axillaris HOM05D006610 ORTHO05D008447 2.9e-48 196.1 151 61.6
FAN28G2812 Fragaria x ananassa HOM05D006610 ORTHO05D008447 3.8e-48 195.7 178 58.4
Gorai.003G006700 Gossypium raimondii HOM05D006610 ORTHO05D008447 3.8e-48 195.7 213 49.8
MSTRG.15312 Avicennia marina HOM05D006610 ORTHO05D008447 5.0e-48 195.3 157 59.2
CDE09G0967 Ceratophyllum demersum HOM05D006610 ORTHO05D008447 5.0e-48 195.3 159 61.6
Phvul.003G266300 Phaseolus vulgaris HOM05D006610 ORTHO05D008447 5.0e-48 195.3 177 55.4
Hma1.2p1_0315F.1_g122440 Hydrangea macrophylla HOM05D006610 ORTHO05D008447 6.5e-48 194.9 153 61.4
THA.LOC104819168 Tarenaya hassleriana HOM05D006610 ORTHO05D008447 6.5e-48 194.9 156 62.8
arahy.Tifrunner.gnm1.ann1.UN150X Arachis hypogaea HOM05D006610 ORTHO05D008447 8.5e-48 194.5 156 59.0
Hund16514 Selenicereus undatus HOM05D006610 ORTHO05D008447 8.5e-48 194.5 153 62.7
AL8G45500 Arabidopsis lyrata HOM05D006610 ORTHO05D008447 1.1e-47 194.1 152 61.8
A02p44620 Brassica napus HOM05D006610 ORTHO05D008447 1.1e-47 194.1 154 63.0
BraA02t09378Z Brassica rapa HOM05D006610 ORTHO05D008447 1.1e-47 194.1 154 63.0
Duzib187G1817 Durio zibethinus HOM05D006610 ORTHO05D008447 1.1e-47 194.1 157 61.1
Aqoxy6G02108 Aquilegia oxysepala HOM05D006610 ORTHO05D008447 1.4e-47 193.7 152 62.5
CANSAT01G0612 Cannabis sativa HOM05D006610 ORTHO05D008447 1.4e-47 193.7 176 56.2
Carub.0008s2842 Capsella rubella HOM05D006610 ORTHO05D008447 1.9e-47 193.4 156 62.8
FAN19G1298 Fragaria x ananassa HOM05D006610 ORTHO05D008447 1.9e-47 193.4 153 63.4
Migut.H00253 Erythranthe guttata HOM05D006610 ORTHO05D008447 2.5e-47 193.0 196 51.0
THA.LOC104821342 Tarenaya hassleriana HOM05D006610 ORTHO05D008447 2.5e-47 193.0 155 61.9
Os09g0541700 Oryza sativa ssp. japonica HOM05D006610 ORTHO05D008447 3.2e-47 192.6 186 52.7
Sed0015497 Sechium edule HOM05D006610 ORTHO05D008447 3.2e-47 192.6 156 60.9
DCAR_014043 Daucus carota HOM05D006610 ORTHO05D008447 4.2e-47 192.2 152 59.2
SalBow3G0370 Salvia bowleyana HOM05D006610 ORTHO05D008447 4.2e-47 192.2 134 67.9
SalBow3G0548 Salvia bowleyana HOM05D006610 ORTHO05D008447 4.2e-47 192.2 134 67.9
Ciclev10026475m.g Citrus clementina HOM05D006610 ORTHO05D008447 9.4e-47 191.0 157 59.2
Glyma.16G123000 Glycine max HOM05D006610 ORTHO05D008447 9.4e-47 191.0 175 55.4
Cfa007018 Carpinus fangiana HOM05D006610 ORTHO05D008447 1.2e-46 190.7 167 57.5
Eucgr.I02316 Eucalyptus grandis HOM05D006610 ORTHO05D008447 1.2e-46 190.7 159 59.1
BolC2t12560H Brassica oleracea HOM05D006610 ORTHO05D008447 1.6e-46 190.3 155 63.9
Lalb_Chr16g0391471 Lupinus albus HOM05D006610 ORTHO05D008447 1.6e-46 190.3 191 51.3
CsaV3_3G000580 Cucumis sativus L. HOM05D006610 ORTHO05D008447 2.1e-46 189.9 156 59.6
TPR.G19505 Trifolium pratense HOM05D006610 ORTHO05D008447 2.1e-46 189.9 159 56.6
AT5G66090 Arabidopsis thaliana HOM05D006610 ORTHO05D008447 2.7e-46 189.5 178 57.3
Haze_03713 Corylus avellana HOM05D006610 ORTHO05D008447 4.6e-46 188.7 156 59.6
MELO3C013747.2 Cucumis melo HOM05D006610 ORTHO05D008447 6.1e-46 188.3 156 59.0
Psat4g102280 Pisum sativum HOM05D006610 ORTHO05D008447 6.1e-46 188.3 156 58.3
Nn6g31943 Nelumbo nucifera HOM05D006610 ORTHO05D008447 7.9e-46 188.0 131 70.2
Thhalv10004913m.g Eutrema salsugineum HOM05D006610 ORTHO05D008447 1.0e-45 187.6 158 59.5
Medtr8g075110 Medicago truncatula HOM05D006610 ORTHO05D008447 1.0e-45 187.6 150 59.3
CARHR281660 Cardamine hirsuta HOM05D006610 ORTHO05D008447 1.4e-45 187.2 161 59.0
MBI05_g19586_MAGBIO Magnolia biondii HOM05D006610 ORTHO05D008447 1.4e-45 187.2 129 69.8
SMO361G0750 Selaginella moellendorffii HOM05D004797 ORTHO05D005752 5.1e-45 185.3 147 66.0
FAN23G0795 Fragaria x ananassa HOM05D006610 ORTHO05D008447 8.8e-45 184.5 159 60.4
FAN26G1933 Fragaria x ananassa HOM05D006610 ORTHO05D008447 2.2e-43 179.9 147 62.6
PSO170G5432 Papaver somniferum HOM05D006610 ORTHO05D008447 8.2e-43 177.9 144 61.8
Gohir.D11G179450 Gossypium hirsutum HOM05D006610 ORTHO05D008447 2.0e-41 173.3 152 57.2
unitig_736.g22562 Utricularia gibba HOM05D006610 ORTHO05D008447 5.9e-41 171.8 152 57.2
Aa31LG1G14570 Aethionema arabicum HOM05D006610 ORTHO05D008447 1.0e-40 171.0 177 52.0
AUR62018013 Chenopodium quinoa HOM05D006610 ORTHO05D008447 2.9e-40 169.5 159 56.0
Lsat_1_v5_gn_3_71540 Lactuca sativa HOM05D006610 ORTHO05D008447 1.4e-39 167.2 136 58.8
Gorai.007G191500 Gossypium raimondii HOM05D006610 ORTHO05D008447 1.2e-38 164.1 157 54.1
ClCG10G000510 Citrullus lanatus HOM05D006610 ORTHO05D008447 3.6e-38 162.5 168 49.4
QL06p051388 Quercus lobata HOM05D006610 ORTHO05D008447 1.0e-37 161.0 109 67.0
Oeu000676.1 Olea europaea HOM05D006610 ORTHO05D008447 6.7e-37 158.3 108 66.7
Duzib147G1005 Durio zibethinus HOM05D006610 ORTHO05D008447 5.7e-36 155.2 152 55.3
Hma1.2p1_3766F.1_g337520 Hydrangea macrophylla HOM05D006610 ORTHO05D008447 4.8e-35 152.1 110 63.6
Dinv08559 Davidia involucrata HOM05D006610 ORTHO05D008447 8.2e-27 124.8 88 63.6
Lsat_1_v5_gn_2_20941 Lactuca sativa HOM05D006610 ORTHO05D008447 2.9e-24 116.3 103 56.3
Cre15.g638400 Chlamydomonas reinhardtii HOM05D006610 ORTHO05D008447 1.2e-22 110.9 181 36.5
HPP92_025898 Vanilla planifolia HOM05D006610 ORTHO05D008447 2.7e-22 109.8 106 53.8
BcaC07g37739 Brassica carinata HOM05D006610 ORTHO05D008447 9.8e-20 101.3 68 67.6
BolC8t48119H Brassica oleracea HOM05D006610 ORTHO05D008447 9.8e-20 101.3 68 67.6
FvH4_1g11240 Fragaria vesca HOM05D006610 ORTHO05D008447 2.2e-19 100.1 95 57.9
Sc03g0003740 Simmondsia chinensis HOM05D006610 ORTHO05D008447 3.7e-19 99.4 91 57.1
Nn5g30811 Nelumbo nucifera HOM05D006610 ORTHO05D008447 6.3e-19 98.6 89 57.3
Thecc.01G013000 Theobroma cacao HOM05D006610 ORTHO05D008447 2.7e-17 93.2 93 51.6
Gohir.A11G172600 Gossypium hirsutum HOM05D006610 ORTHO05D008447 8.5e-16 88.2 92 51.1
vmacro18432 Vaccinium macrocarpon HOM05D006610 ORTHO05D008447 8.8e-13 78.2 58 50.0
Solyc02g083525.1 Solanum lycopersicum HOM05D006610 ORTHO05D008447 5.0e-08 62.4 52 55.8


User provided reference genes

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