Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c9_6120 Physcomitrium patens HOM05D031977 ORTHO05D030462 2.0e-241 838.6 397 100.0
Pp3c26_8420 Physcomitrium patens HOM05D031977 ORTHO05D030462 2.3e-136 489.6 396 59.1
Pp3c2_350 Physcomitrium patens HOM05D002809 ORTHO05D030462 6.5e-22 109.4 327 27.5
Mapoly0019s0019 Marchantia polymorpha HOM05D002809 ORTHO05D004563 1.6e-20 104.8 313 28.1
Mapoly0005s0140 Marchantia polymorpha HOM05D002809 ORTHO05D004563 4.1e-16 90.1 391 24.8
Mapoly0002s0187 Marchantia polymorpha HOM05D002809 ORTHO05D004563 3.2e-13 80.5 382 23.3
Pp3c11_18710 Physcomitrium patens HOM05D004302 ORTHO05D004939 4.2e-13 80.1 378 23.3
Pp3c26_14690 Physcomitrium patens HOM05D004302 ORTHO05D004939 2.1e-12 77.8 199 31.2
Pp3c7_9930 Physcomitrium patens HOM05D002809 ORTHO05D004939 4.7e-12 76.6 387 24.3
Mapoly0014s0188 Marchantia polymorpha HOM05D002809 ORTHO05D004563 1.4e-11 75.1 403 25.3
Pp3c9_6080 Physcomitrium patens HOM05D002809 ORTHO05D004563 1.4e-11 75.1 368 23.9
Mapoly0025s0090 Marchantia polymorpha HOM05D002809 ORTHO05D004563 2.3e-11 74.3 395 23.0
Mapoly0137s0025 Marchantia polymorpha HOM05D004302 ORTHO05D004939 3.0e-11 73.9 374 24.1
SMO361G0323 Selaginella moellendorffii HOM05D002809 ORTHO05D004939 2.0e-10 71.2 379 23.7
Pp3c24_18510 Physcomitrium patens HOM05D002809 ORTHO05D004939 2.6e-10 70.9 211 28.4
ClCG03G004180 Citrullus lanatus HOM05D005977 ORTHO05D007546 4.4e-10 70.1 399 23.6
Mapoly0005s0092 Marchantia polymorpha HOM05D007753 ORTHO05D009385 5.7e-10 69.7 223 26.9
Aa31LG11G13870 Aethionema arabicum HOM05D004302 ORTHO05D004939 1.3e-09 68.6 381 23.4
Pp3c16_24050 Physcomitrium patens HOM05D002809 ORTHO05D012113 2.8e-09 67.4 145 28.3
AagrBONN_evm.TU.Sc2ySwM_344.2438 Anthoceros agrestis HOM05D002809 ORTHO05D004939 6.3e-09 66.2 316 25.9
Pp3c5_28830 Physcomitrium patens HOM05D004302 ORTHO05D010190 8.2e-09 65.9 205 23.4
CARHR197630 Cardamine hirsuta HOM05D004302 ORTHO05D004939 1.8e-08 64.7 385 22.3
Hma1.2p1_0819F.1_g223720 Hydrangea macrophylla HOM05D007423 ORTHO05D009091 3.1e-08 63.9 331 23.0
Mapoly0001s0050 Marchantia polymorpha HOM05D010424 ORTHO05D254136 7.0e-08 62.8 203 27.6
Pp3c17_13880 Physcomitrium patens HOM05D031977 ORTHO05D310937 7.0e-08 62.8 198 27.3
SMO364G0869 Selaginella moellendorffii HOM05D003005 ORTHO05D004563 1.6e-07 61.6 143 32.2
CsaV3_1G010110 Cucumis sativus L. HOM05D005977 ORTHO05D007546 2.0e-07 61.2 332 22.9
Nn1g06119 Nelumbo nucifera HOM05D006114 ORTHO05D007609 2.6e-07 60.8 152 32.2
BraA07t28977Z Brassica rapa HOM05D002809 ORTHO05D004563 3.5e-07 60.5 370 21.9
Thhalv10013540m.g Eutrema salsugineum HOM05D004302 ORTHO05D004939 3.5e-07 60.5 372 21.8
MapolyY_A0023 Marchantia polymorpha HOM05D002809 ORTHO05D004563 3.5e-07 60.5 387 23.8
Sed0010814 Sechium edule HOM05D006114 ORTHO05D007609 4.5e-07 60.1 176 30.7
SMO351G0091 Selaginella moellendorffii HOM05D005977 ORTHO05D007546 5.9e-07 59.7 393 23.2
Pp3c22_14550 Physcomitrium patens HOM05D002809 ORTHO05D009385 7.7e-07 59.3 200 28.5
Pp3c5_26310 Physcomitrium patens HOM05D002809 ORTHO05D009385 7.7e-07 59.3 206 25.2
PGR119G2572 Punica granatum HOM05D002809 ORTHO05D004563 7.7e-07 59.3 238 25.6
SMO239G0172 Selaginella moellendorffii HOM05D003005 ORTHO05D004563 7.7e-07 59.3 140 27.9
C09p25610 Brassica napus HOM05D007423 ORTHO05D009091 1.0e-06 58.9 197 27.4
AagrBONN_evm.TU.Sc2ySwM_362.1789 Anthoceros agrestis HOM05D002809 ORTHO05D009361 1.3e-06 58.5 184 26.6
AagrBONN_evm.TU.Sc2ySwM_362.2449 Anthoceros agrestis HOM05D004302 ORTHO05D004939 1.3e-06 58.5 200 25.0
Sc24g0003010 Simmondsia chinensis HOM05D005977 ORTHO05D007546 1.3e-06 58.5 323 23.5
SEGI_07480 Sequoiadendron giganteum HOM05D005977 ORTHO05D004563 2.2e-06 57.8 308 24.0
EL10Ac6g13516 Beta vulgaris HOM05D002809 ORTHO05D004563 2.9e-06 57.4 203 24.1
Pp3c24_1980 Physcomitrium patens HOM05D003005 ORTHO05D004563 2.9e-06 57.4 205 27.8
ATR0691G100 Amborella trichopoda HOM05D004302 ORTHO05D004939 3.8e-06 57.0 182 25.8
AT5G43190 Arabidopsis thaliana HOM05D007423 ORTHO05D009091 3.8e-06 57.0 200 27.5
CANSAT25G1658 Cannabis sativa HOM05D007423 ORTHO05D009091 3.8e-06 57.0 189 28.0
MELO3C002401.2 Cucumis melo HOM05D005977 ORTHO05D007546 3.8e-06 57.0 316 23.4
Pp3c7_3560 Physcomitrium patens HOM05D004302 ORTHO05D010190 3.8e-06 57.0 216 23.6
A07p11920 Brassica napus HOM05D002809 ORTHO05D004563 8.5e-06 55.8 194 27.3
Dinv44955 Davidia involucrata HOM05D007423 ORTHO05D009091 8.5e-06 55.8 240 26.7
Gohir.A05G269900 Gossypium hirsutum HOM05D006114 ORTHO05D007609 8.5e-06 55.8 138 31.2
Gohir.D05G271900 Gossypium hirsutum HOM05D006114 ORTHO05D007609 8.5e-06 55.8 138 31.2
Gorai.009G284900 Gossypium raimondii HOM05D006114 ORTHO05D007609 8.5e-06 55.8 138 31.2
Sp2g08010 Schrenkiella parvula HOM05D007423 ORTHO05D009091 8.5e-06 55.8 201 25.9


User provided reference genes

Program Settings