Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c9_6030 Physcomitrium patens HOM05D005712 ORTHO05D007865 1.9e-223 778.9 393 100.0
Pp3c15_5620 Physcomitrium patens HOM05D005712 ORTHO05D007865 3.1e-157 558.9 393 72.3
Mapoly0022s0159 Marchantia polymorpha HOM05D005712 ORTHO05D007865 2.5e-74 283.5 194 70.6
AagrBONN_evm.TU.Sc2ySwM_117.1031 Anthoceros agrestis HOM05D005712 ORTHO05D007865 2.9e-67 260.0 222 61.3
SEGI_27803 Sequoiadendron giganteum HOM05D005712 ORTHO05D007865 7.5e-63 245.4 244 52.9
SMO276G0054 Selaginella moellendorffii HOM05D005712 ORTHO05D007865 9.2e-61 238.4 216 57.9
SGA_v2.0_scaffold54G19632 Striga asiatica HOM05D005712 ORTHO05D007865 2.3e-51 207.2 197 55.3
Thecc.08G064200 Theobroma cacao HOM05D005712 ORTHO05D007865 2.3e-51 207.2 182 56.6
Actinidia15518 Actinidia chinensis HOM05D005712 ORTHO05D007865 3.0e-51 206.8 186 56.5
COL.COLO4_07687 Corchorus olitorius HOM05D005712 ORTHO05D007865 3.9e-51 206.5 182 56.6
Aqoxy6G01560 Aquilegia oxysepala HOM05D005712 ORTHO05D007865 6.6e-51 205.7 192 53.1
Migut.N02981 Erythranthe guttata HOM05D005712 ORTHO05D007865 8.6e-51 205.3 175 57.7
Duzib116G0237 Durio zibethinus HOM05D005712 ORTHO05D007865 1.5e-50 204.5 182 54.9
QL02p015343 Quercus lobata HOM05D005712 ORTHO05D007865 1.5e-50 204.5 182 56.6
Actinidia17068 Actinidia chinensis HOM05D005712 ORTHO05D007865 1.9e-50 204.1 186 55.4
Haze_22847 Corylus avellana HOM05D005712 ORTHO05D007865 1.9e-50 204.1 214 50.5
Cpa.g.sc26.149 Carica papaya HOM05D005712 ORTHO05D007865 3.3e-50 203.4 200 52.0
Atru.chr13.78 Acer truncatum HOM05D005712 ORTHO05D007865 4.3e-50 203.0 182 55.5
ATR0807G100 Amborella trichopoda HOM05D005712 ORTHO05D007865 5.6e-50 202.6 268 43.3
MBI05_g08201_MAGBIO Magnolia biondii HOM05D005712 ORTHO05D007865 5.6e-50 202.6 277 44.0
Cfa014126 Carpinus fangiana HOM05D005712 ORTHO05D007865 9.5e-50 201.8 175 56.0
Rhsim06G0004000 Rhododendron simsii HOM05D005712 ORTHO05D007865 9.5e-50 201.8 186 56.5
Gohir.D05G181100 Gossypium hirsutum HOM05D005712 ORTHO05D007865 1.2e-49 201.4 182 55.5
Gorai.009G186100 Gossypium raimondii HOM05D005712 ORTHO05D007865 1.2e-49 201.4 182 55.5
Prupe.5G006400 Prunus persica HOM05D005712 ORTHO05D007865 1.6e-49 201.1 264 43.9
Ciclev10001686m.g Citrus clementina HOM05D005712 ORTHO05D007865 2.1e-49 200.7 182 56.0
GSVIVG01013413001 Vitis vinifera HOM05D005712 ORTHO05D007865 2.1e-49 200.7 192 53.6
Hund05083 Selenicereus undatus HOM05D005712 ORTHO05D007865 2.8e-49 200.3 205 54.1
EL10Ac1g01884 Beta vulgaris HOM05D005712 ORTHO05D007865 3.6e-49 199.9 182 57.1
Gohir.A05G177700 Gossypium hirsutum HOM05D005712 ORTHO05D007865 3.6e-49 199.9 182 54.9
Glyma.06G015100 Glycine max HOM05D005712 ORTHO05D007865 6.2e-49 199.1 175 57.7
Dinv31977 Davidia involucrata HOM05D005712 ORTHO05D007865 8.1e-49 198.7 187 55.1
vmacro21777 Vaccinium macrocarpon HOM05D005712 ORTHO05D007865 8.1e-49 198.7 186 55.4
Potri.005G255300 Populus trichocarpa HOM05D005712 ORTHO05D007865 1.1e-48 198.4 187 53.5
CSS0017080 Camellia sinensis var. sinensis HOM05D005712 ORTHO05D007865 1.4e-48 198.0 187 53.5
AUR62024105 Chenopodium quinoa HOM05D005712 ORTHO05D007865 1.4e-48 198.0 185 56.2
Peaxi162Scf00632g00416 Petunia axillaris HOM05D005712 ORTHO05D007865 1.4e-48 198.0 176 56.2
Sabra05G0197900 Salix brachista HOM05D005712 ORTHO05D007865 1.4e-48 198.0 236 47.0
HPP92_022548 Vanilla planifolia HOM05D005712 ORTHO05D007865 1.8e-48 197.6 209 53.1
CAN.G36.16 Capsicum annuum HOM05D005712 ORTHO05D007865 2.3e-48 197.2 188 54.8
TAR381G1666 Trochodendron aralioides HOM05D005712 ORTHO05D007865 2.3e-48 197.2 192 52.1
AT1G20830 Arabidopsis thaliana HOM05D005712 ORTHO05D007865 3.1e-48 196.8 191 53.4
Sc02g0009220 Simmondsia chinensis HOM05D005712 ORTHO05D007865 3.1e-48 196.8 248 44.4
VMungo1309G2122 Vigna mungo HOM05D005712 ORTHO05D007865 3.1e-48 196.8 166 59.6
MSTRG.22087 Avicennia marina HOM05D005712 ORTHO05D007865 4.0e-48 196.4 227 49.8
Nitab4.5_0000486g0150 Nicotiana tabacum HOM05D005712 ORTHO05D007865 4.0e-48 196.4 188 53.7
AL1G33850 Arabidopsis lyrata HOM05D005712 ORTHO05D007865 5.2e-48 196.1 191 52.9
Oeu004544.1 Olea europaea HOM05D005712 ORTHO05D007865 5.2e-48 196.1 169 59.8
CiPaw.07G134700 Carya illinoinensis HOM05D005712 ORTHO05D007865 6.8e-48 195.7 203 50.7
Lalb_Chr23g0265571 Lupinus albus HOM05D005712 ORTHO05D007865 6.8e-48 195.7 177 58.2
Glyma.04G015100 Glycine max HOM05D005712 ORTHO05D007865 8.9e-48 195.3 151 62.9
BcaB07g32078 Brassica carinata HOM05D005712 ORTHO05D007865 1.2e-47 194.9 191 52.9
Lsat_1_v5_gn_2_2221 Lactuca sativa HOM05D005712 ORTHO05D007865 1.2e-47 194.9 276 44.2
Sopen08g012540 Solanum pennellii HOM05D005712 ORTHO05D007865 1.2e-47 194.9 191 54.5
PGSC0003DMG400000968 Solanum tuberosum HOM05D005712 ORTHO05D007865 1.2e-47 194.9 191 55.0
BcaC05g25986 Brassica carinata HOM05D005712 ORTHO05D007865 1.5e-47 194.5 191 51.3
C05p19380 Brassica napus HOM05D005712 ORTHO05D007865 1.5e-47 194.5 191 51.3
Thhalv10007995m.g Eutrema salsugineum HOM05D005712 ORTHO05D007865 2.0e-47 194.1 191 51.8
Solyc08g042080.3 Solanum lycopersicum HOM05D005712 ORTHO05D007865 2.0e-47 194.1 191 54.5
A06p16820 Brassica napus HOM05D005712 ORTHO05D007865 2.6e-47 193.7 191 51.8
BraA06t24791Z Brassica rapa HOM05D005712 ORTHO05D007865 2.6e-47 193.7 191 51.8
Cc10_g00320 Coffea canephora HOM05D005712 ORTHO05D007865 2.6e-47 193.7 182 54.9
FAN04G3045 Fragaria x ananassa HOM05D005712 ORTHO05D007865 2.6e-47 193.7 225 47.1
Nn5g31025 Nelumbo nucifera HOM05D005712 ORTHO05D007865 2.6e-47 193.7 271 43.9
CARHR021260 Cardamine hirsuta HOM05D005712 ORTHO05D007865 3.4e-47 193.4 192 51.6
FAN18G0352 Fragaria x ananassa HOM05D005712 ORTHO05D007865 3.4e-47 193.4 315 39.0
Phvul.009G007500 Phaseolus vulgaris HOM05D005712 ORTHO05D007865 3.4e-47 193.4 166 58.4
Ah.00g001120 Amaranthus hybridus HOM05D005712 ORTHO05D007865 4.4e-47 193.0 194 53.1
FAN13G2028 Fragaria x ananassa HOM05D005712 ORTHO05D007865 4.4e-47 193.0 315 39.0
Hma1.2p1_0699F.1_g205630 Hydrangea macrophylla HOM05D005712 ORTHO05D007865 4.4e-47 193.0 185 55.1
TWI56G0384 Tripterygium wilfordii HOM05D005712 ORTHO05D007865 4.4e-47 193.0 205 49.8
CDE04G2669 Ceratophyllum demersum HOM05D005712 ORTHO05D007865 5.8e-47 192.6 192 53.1
Ca_15390_v3 Cicer arietinum L. HOM05D005712 ORTHO05D007865 9.9e-47 191.8 182 56.0
Manes.05G126100 Manihot esculenta HOM05D005712 ORTHO05D007865 9.9e-47 191.8 193 50.8
Potri.002G006300 Populus trichocarpa HOM05D005712 ORTHO05D007865 9.9e-47 191.8 187 52.4
TWI12G0719 Tripterygium wilfordii HOM05D005712 ORTHO05D007865 9.9e-47 191.8 187 52.9
BcaB03g12849 Brassica carinata HOM05D005712 ORTHO05D007865 1.3e-46 191.4 235 43.8
Carub.0001s2029 Capsella rubella HOM05D005712 ORTHO05D007865 1.3e-46 191.4 191 51.8
FvH4_5g25940 Fragaria vesca HOM05D005712 ORTHO05D007865 1.3e-46 191.4 271 42.1
MD06G1005200 Malus domestica HOM05D005712 ORTHO05D007865 1.3e-46 191.4 220 48.2
Sp1g18530 Schrenkiella parvula HOM05D005712 ORTHO05D007865 1.3e-46 191.4 191 52.9
Aa31LG7G4990 Aethionema arabicum HOM05D005712 ORTHO05D007865 1.7e-46 191.0 191 51.8
BolC5t30641H Brassica oleracea HOM05D005712 ORTHO05D007865 1.7e-46 191.0 192 51.0
Hma1.2p1_0699F.1_g205640 Hydrangea macrophylla HOM05D005712 ORTHO05D007865 1.7e-46 191.0 183 54.6
Sed0012463 Sechium edule HOM05D005712 ORTHO05D007865 1.7e-46 191.0 181 55.8
arahy.Tifrunner.gnm1.ann1.16JRKN Arachis hypogaea HOM05D005712 ORTHO05D007865 2.2e-46 190.7 170 56.5
ECA238G0561 Erigeron canadensis HOM05D005712 ORTHO05D007865 2.2e-46 190.7 173 55.5
TAR625G0170 Trochodendron aralioides HOM05D005712 ORTHO05D007865 2.2e-46 190.7 226 46.5
arahy.Tifrunner.gnm1.ann1.CTTM8W Arachis hypogaea HOM05D005712 ORTHO05D007865 3.7e-46 189.9 181 54.7
CANSAT35G0891 Cannabis sativa HOM05D005712 ORTHO05D007865 4.9e-46 189.5 226 48.2
AUR62035160 Chenopodium quinoa HOM05D005712 ORTHO05D007865 4.9e-46 189.5 159 61.0
Nitab4.5_0004637g0020 Nicotiana tabacum HOM05D005712 ORTHO05D007865 4.9e-46 189.5 241 45.6
Eucgr.F03584 Eucalyptus grandis HOM05D005712 ORTHO05D007865 6.4e-46 189.1 226 46.5
FAN08G0897 Fragaria x ananassa HOM05D005712 ORTHO05D007865 6.4e-46 189.1 315 39.4
THA.LOC104813742 Tarenaya hassleriana HOM05D005712 ORTHO05D007865 6.4e-46 189.1 268 43.7
Ca_29628_v3 Cicer arietinum L. HOM05D005712 ORTHO05D007865 1.1e-45 188.3 157 60.5
SalBow6G6969 Salvia bowleyana HOM05D005712 ORTHO05D007865 1.1e-45 188.3 219 46.6
PSO541G4707 Papaver somniferum HOM05D005712 ORTHO05D007865 1.9e-45 187.6 213 47.9
PSO675G3648 Papaver somniferum HOM05D005712 ORTHO05D007865 1.9e-45 187.6 213 47.9
RcHm_v2.0_Chr4g0410601 Rosa chinensis HOM05D005712 ORTHO05D007865 2.4e-45 187.2 225 45.8
unitig_22.g5745 Utricularia gibba HOM05D005712 ORTHO05D007865 2.4e-45 187.2 175 52.0
RcHm_v2.0_Chr7g0216471 Rosa chinensis HOM05D005712 ORTHO05D007865 3.2e-45 186.8 233 44.6
Medtr3g116050 Medicago truncatula HOM05D005712 ORTHO05D007865 4.1e-45 186.4 195 51.3
MELO3C017048.2 Cucumis melo HOM05D005712 ORTHO05D007865 5.4e-45 186.0 230 47.0
CsaV3_4G037540 Cucumis sativus L. HOM05D005712 ORTHO05D007865 5.4e-45 186.0 254 43.3
Lj1g0001697 Lotus japonicus HOM05D005712 ORTHO05D007865 9.2e-45 185.3 221 48.9
DCAR_022990 Daucus carota HOM05D000190 ORTHO05D007865 2.7e-44 183.7 184 51.6
HanXRQChr06g0185301 Helianthus annuus HOM05D005712 ORTHO05D007865 4.6e-44 183.0 228 44.7
Zm00001eb072780 Zea mays HOM05D005712 ORTHO05D007865 2.3e-43 180.6 268 41.0
Lj4C5T14 Lonicera japonica HOM05D005712 ORTHO05D007865 3.0e-43 180.3 280 40.4
Psat5g008680 Pisum sativum HOM05D005712 ORTHO05D007865 6.6e-43 179.1 182 51.6
TPR.G38133 Trifolium pratense HOM05D005712 ORTHO05D007865 3.3e-42 176.8 276 40.2
Cpa.g.sc26.148 Carica papaya HOM05D005712 ORTHO05D007865 1.8e-40 171.0 144 58.3
Zm00001eb428100 Zea mays HOM05D005712 ORTHO05D007865 1.8e-40 171.0 193 45.6
ClCG11G018940 Citrullus lanatus HOM05D005712 ORTHO05D007865 6.8e-40 169.1 269 38.7
Os04g0584900 Oryza sativa ssp. japonica HOM05D005712 ORTHO05D007865 1.1e-37 161.8 289 36.0
Oeu019899.1 Olea europaea HOM05D005712 ORTHO05D007865 3.9e-35 153.3 120 61.7
Duzib093G1432 Durio zibethinus HOM05D005712 ORTHO05D007865 2.4e-29 134.0 105 60.0
Cpa.g.c30366.3 Carica papaya HOM05D005712 ORTHO05D007865 1.5e-18 98.2 78 55.1
Cpa.g.c44851 Carica papaya HOM05D005712 ORTHO05D007865 5.6e-18 96.3 66 60.6
Oeu019902.1 Olea europaea HOM05D005712 ORTHO05D007865 1.5e-10 71.6 60 56.7
A07p15460 Brassica napus HOM05D005712 ORTHO05D007865 5.3e-08 63.2 59 49.2


User provided reference genes

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