Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c9_4240 Physcomitrium patens HOM05D000595 ORTHO05D008454 5.2e-262 907.1 447 100.0
Mapoly0090s0077 Marchantia polymorpha HOM05D000595 ORTHO05D008454 4.9e-119 432.2 428 52.3
Nn1g07860 Nelumbo nucifera HOM05D000595 ORTHO05D008454 6.4e-119 431.8 403 52.6
Os01g0911900 Oryza sativa ssp. japonica HOM05D000595 ORTHO05D008454 9.3e-118 427.9 409 51.8
TWI53G1083 Tripterygium wilfordii HOM05D000595 ORTHO05D008454 1.1e-115 421.0 404 50.7
PSO017G5401 Papaver somniferum HOM05D000595 ORTHO05D008454 1.9e-115 420.2 407 50.1
PSO063G0672 Papaver somniferum HOM05D000595 ORTHO05D008454 2.5e-115 419.9 422 50.0
Psat1g165160 Pisum sativum HOM05D000595 ORTHO05D008454 4.3e-115 419.1 406 52.2
TAR636G3484 Trochodendron aralioides HOM05D000595 ORTHO05D008454 4.3e-115 419.1 404 51.0
PGR083G2732 Punica granatum HOM05D000595 ORTHO05D008454 5.6e-115 418.7 401 52.6
TPR.G22264 Trifolium pratense HOM05D000595 ORTHO05D008454 5.6e-115 418.7 406 51.7
CsaV3_1G042950 Cucumis sativus L. HOM05D000595 ORTHO05D008454 9.6e-115 417.9 402 50.0
Sed0004774 Sechium edule HOM05D000595 ORTHO05D008454 9.6e-115 417.9 427 49.6
AagrBONN_evm.TU.Sc2ySwM_344.3272 Anthoceros agrestis HOM05D000595 ORTHO05D008454 2.1e-114 416.8 406 52.0
Aa31LG1G19900 Aethionema arabicum HOM05D000595 ORTHO05D008454 6.2e-114 415.2 405 51.1
Prupe.1G006900 Prunus persica HOM05D000595 ORTHO05D008454 6.2e-114 415.2 406 49.5
MD04G1008200 Malus domestica HOM05D000595 ORTHO05D008454 8.1e-114 414.8 405 49.4
RcHm_v2.0_Chr4g0415411 Rosa chinensis HOM05D000595 ORTHO05D008454 1.1e-113 414.5 404 50.5
Aqoxy2G03878 Aquilegia oxysepala HOM05D000595 ORTHO05D008454 1.4e-113 414.1 405 50.1
Peaxi162Scf00652g00421 Petunia axillaris HOM05D000595 ORTHO05D008454 1.4e-113 414.1 434 47.2
ATR1145G018 Amborella trichopoda HOM05D000595 ORTHO05D008454 1.8e-113 413.7 400 51.0
HanXRQChr07g0185731 Helianthus annuus HOM05D000595 ORTHO05D008454 1.8e-113 413.7 406 50.0
Potri.001G314700 Populus trichocarpa HOM05D000595 ORTHO05D008454 1.8e-113 413.7 401 49.6
Nitab4.5_0000676g0200 Nicotiana tabacum HOM05D000595 ORTHO05D008454 2.4e-113 413.3 421 49.4
Lj6g0010121 Lotus japonicus HOM05D000595 ORTHO05D008454 3.1e-113 412.9 405 50.4
THA.LOC104801033 Tarenaya hassleriana HOM05D000595 ORTHO05D008454 3.1e-113 412.9 415 50.4
Ca_00886_v3 Cicer arietinum L. HOM05D000595 ORTHO05D001274 4.0e-113 412.5 417 50.8
SMO367G0911 Selaginella moellendorffii HOM05D000595 ORTHO05D008454 4.0e-113 412.5 402 50.2
Lalb_Chr15g0088911 Lupinus albus HOM05D000595 ORTHO05D008454 5.3e-113 412.1 405 49.9
arahy.Tifrunner.gnm1.ann1.897VZR Arachis hypogaea HOM05D000595 ORTHO05D008454 1.2e-112 411.0 424 49.8
ClCG05G003330 Citrullus lanatus HOM05D000595 ORTHO05D008454 2.0e-112 410.2 416 49.5
arahy.Tifrunner.gnm1.ann1.G7HRZN Arachis hypogaea HOM05D000595 ORTHO05D008454 2.6e-112 409.8 424 49.8
Duzib151G0403 Durio zibethinus HOM05D000595 ORTHO05D008454 2.6e-112 409.8 401 48.9
AT1G04900 Arabidopsis thaliana HOM05D000595 ORTHO05D008454 3.4e-112 409.5 401 51.1
C05p03050 Brassica napus HOM05D000595 ORTHO05D008454 3.4e-112 409.5 406 50.7
Atru.chr4.1710 Acer truncatum HOM05D000595 ORTHO05D008454 4.5e-112 409.1 401 49.1
A10p03330 Brassica napus HOM05D000595 ORTHO05D008454 4.5e-112 409.1 421 50.1
BraA10t42609Z Brassica rapa HOM05D000595 ORTHO05D008454 4.5e-112 409.1 421 50.1
Gorai.011G158900 Gossypium raimondii HOM05D000595 ORTHO05D008454 5.8e-112 408.7 401 49.6
Lj6C558G7 Lonicera japonica HOM05D000595 ORTHO05D008454 5.8e-112 408.7 413 49.4
HPP92_008949 Vanilla planifolia HOM05D000595 ORTHO05D008454 5.8e-112 408.7 404 51.7
VMungo0540G0041 Vigna mungo HOM05D000595 ORTHO05D001274 5.8e-112 408.7 407 49.6
BolC5t29087H Brassica oleracea HOM05D000595 ORTHO05D008454 9.9e-112 407.9 421 50.1
Glyma.15G133500 Glycine max HOM05D000595 ORTHO05D008454 9.9e-112 407.9 405 49.4
CAN.G767.41 Capsicum annuum HOM05D000595 ORTHO05D008454 1.3e-111 407.5 400 49.8
AL1G14620 Arabidopsis lyrata HOM05D000595 ORTHO05D008454 1.7e-111 407.1 401 50.6
Sc13g0000130 Simmondsia chinensis HOM05D000595 ORTHO05D008454 1.7e-111 407.1 402 50.5
Sopen12g033140 Solanum pennellii HOM05D000595 ORTHO05D008454 2.2e-111 406.8 403 49.9
Carub.0001s0414 Capsella rubella HOM05D000595 ORTHO05D008454 2.9e-111 406.4 401 50.9
Nitab4.5_0000850g0080 Nicotiana tabacum HOM05D000595 ORTHO05D008454 3.8e-111 406.0 431 48.3
Solyc12g098360.2 Solanum lycopersicum HOM05D000595 ORTHO05D008454 3.8e-111 406.0 403 50.1
FvH4_4g15840 Fragaria vesca HOM05D000595 ORTHO05D008454 6.4e-111 405.2 402 50.0
Thecc.04G204800 Theobroma cacao HOM05D000595 ORTHO05D008454 8.4e-111 404.8 401 49.4
Eucgr.H02785 Eucalyptus grandis HOM05D000595 ORTHO05D008454 1.1e-110 404.4 403 48.9
Phvul.006G125200 Phaseolus vulgaris HOM05D000595 ORTHO05D008454 1.4e-110 404.1 406 49.5
Thhalv10007628m.g Eutrema salsugineum HOM05D000595 ORTHO05D008454 1.9e-110 403.7 415 49.4
Nitab4.5_0005206g0070 Nicotiana tabacum HOM05D000595 ORTHO05D008454 3.2e-110 402.9 440 47.7
FAN12G2005 Fragaria x ananassa HOM05D000595 ORTHO05D008454 1.6e-109 400.6 399 49.9
CSS0010328 Camellia sinensis var. sinensis HOM05D000595 ORTHO05D008454 4.6e-109 399.1 404 48.0
EL10Ac3g07487 Beta vulgaris HOM05D000595 ORTHO05D008454 7.9e-109 398.3 423 48.9
Ah.13g078130 Amaranthus hybridus HOM05D000595 ORTHO05D008454 3.0e-108 396.4 405 48.9
Cc03_g07770 Coffea canephora HOM05D000595 ORTHO05D008454 3.9e-108 396.0 419 45.8
Dinv29591 Davidia involucrata HOM05D000595 ORTHO05D008454 1.9e-107 393.7 443 46.0
Migut.N00379 Erythranthe guttata HOM05D000595 ORTHO05D008454 4.3e-107 392.5 402 48.5
MELO3C015176.2 Cucumis melo HOM05D000595 ORTHO05D008454 1.3e-106 391.0 460 44.6
Lsat_1_v5_gn_6_60501 Lactuca sativa HOM05D000595 ORTHO05D008454 8.4e-103 378.3 365 52.6
Sabra16G0199100 Salix brachista HOM05D000595 ORTHO05D008454 2.5e-102 376.7 466 43.1
Gohir.A10G123700 Gossypium hirsutum HOM05D000595 ORTHO05D008454 3.2e-102 376.3 401 47.1
CARHR004300 Cardamine hirsuta HOM05D000595 ORTHO05D008454 5.1e-100 369.0 401 48.6
COL.COLO4_09879 Corchorus olitorius HOM05D000595 ORTHO05D008454 1.5e-99 367.5 363 51.5
Actinidia37010 Actinidia chinensis HOM05D000595 ORTHO05D008454 1.6e-98 364.0 383 46.5
FAN07G1333 Fragaria x ananassa HOM05D000595 ORTHO05D008454 3.1e-97 359.8 401 45.9
Rhsim09G0055700 Rhododendron simsii HOM05D000595 ORTHO05D008454 2.2e-95 353.6 515 38.4
Sp1g03740 Schrenkiella parvula HOM05D000595 ORTHO05D008454 5.0e-95 352.4 353 49.9
Gohir.D10G142300 Gossypium hirsutum HOM05D000595 ORTHO05D008454 1.4e-94 350.9 354 48.6
ECA233G5324 Erigeron canadensis HOM05D000595 ORTHO05D008454 1.9e-94 350.5 371 48.5
vmacro00479 Vaccinium macrocarpon HOM05D000595 ORTHO05D008454 4.6e-93 345.9 528 37.5
Ciclev10005247m.g Citrus clementina HOM05D000595 ORTHO05D008454 1.0e-92 344.7 355 46.8
AUR62020816 Chenopodium quinoa HOM05D000595 ORTHO05D008454 3.0e-92 343.2 341 50.1
FAN19G1967 Fragaria x ananassa HOM05D000595 ORTHO05D008454 2.0e-91 340.5 401 44.9
DCAR_002262 Daucus carota HOM05D000595 ORTHO05D008454 9.7e-91 338.2 354 48.9
Medtr2g031240 Medicago truncatula HOM05D000595 ORTHO05D008454 9.7e-91 338.2 347 49.6
Haze_11606 Corylus avellana HOM05D000595 ORTHO05D008454 2.2e-90 337.0 344 49.1
GSVIVG01000528001 Vitis vinifera HOM05D000595 ORTHO05D008454 6.3e-90 335.5 344 48.3
Manes.15G053200 Manihot esculenta HOM05D000595 ORTHO05D008454 6.5e-87 325.5 308 52.3
SGA_v2.0_scaffold216G42389 Striga asiatica HOM05D000595 ORTHO05D008454 2.3e-84 317.0 335 46.6
Lj6A570G15 Lonicera japonica HOM05D000595 ORTHO05D008454 1.8e-81 307.4 418 40.9
QL06p024408 Quercus lobata HOM05D000595 ORTHO05D008454 2.9e-79 300.1 315 48.3
AUR62032918 Chenopodium quinoa HOM05D000595 ORTHO05D008454 1.5e-78 297.7 338 45.0
MCO01G355 Micromonas commoda HOM05D000595 ORTHO05D008454 1.6e-69 267.7 426 38.5
CiPaw.01G121900 Carya illinoinensis HOM05D000595 ORTHO05D008454 8.3e-66 255.4 279 46.2
PRCOL_00005088 Prasinoderma coloniale HOM05D000595 ORTHO05D008454 1.8e-65 254.2 405 37.3
unitig_744.g24024 Utricularia gibba HOM05D000595 ORTHO05D008454 7.2e-62 242.3 311 42.4
Zm00001eb143660 Zea mays HOM05D000595 ORTHO05D008454 2.3e-60 237.3 203 54.2
SEGI_10928 Sequoiadendron giganteum HOM05D000595 ORTHO05D008454 1.9e-54 217.6 228 48.7
Cpa.g.sc59.134 Carica papaya HOM05D000595 ORTHO05D008454 4.0e-52 209.9 227 47.6
Cre13.g584700 Chlamydomonas reinhardtii HOM05D000595 ORTHO05D008454 1.4e-49 201.4 424 30.9
CBR_g19088 Chara braunii HOM05D000019 ORTHO05D000048 3.5e-48 196.8 177 53.7
Cfa022406 Carpinus fangiana HOM05D000595 ORTHO05D008454 9.5e-46 188.7 421 31.4
CiPaw.01G121800 Carya illinoinensis HOM05D000595 ORTHO05D008454 4.3e-38 163.3 128 57.8
FvH4_1g23291 Fragaria vesca HOM05D000595 ORTHO05D008454 1.8e-36 157.9 198 42.9
Actinidia33191 Actinidia chinensis HOM05D000595 ORTHO05D008454 1.0e-31 142.1 158 46.2
FAN17G1124 Fragaria x ananassa HOM05D000595 ORTHO05D008454 9.9e-27 125.6 125 48.0
AagrBONN_evm.TU.Sc2ySwM_368.462 Anthoceros agrestis HOM05D000595 ORTHO05D006346 3.7e-26 123.6 123 51.2
QL06p024418 Quercus lobata HOM05D000595 ORTHO05D008454 6.8e-20 102.8 132 41.7
CsaV3_6G039270 Cucumis sativus L. HOM05D000595 ORTHO05D008454 3.8e-18 97.1 89 51.7
EL10Ac4g09027 Beta vulgaris HOM05D000595 ORTHO05D008454 4.2e-17 93.6 114 43.0
Oeu016734.1 Olea europaea HOM05D000595 ORTHO05D008454 1.3e-15 88.6 106 47.2
GSVIVG01000526001 Vitis vinifera HOM05D000595 ORTHO05D008454 2.8e-13 80.9 85 49.4
unitig_744.g24023 Utricularia gibba HOM05D000595 ORTHO05D008454 4.8e-13 80.1 66 54.5
SEGI_41312 Sequoiadendron giganteum HOM05D000595 ORTHO05D008454 8.1e-13 79.3 56 58.9
CsaV3_6G039250 Cucumis sativus L. HOM05D000595 ORTHO05D008454 4.9e-10 70.1 72 48.6
SEGI_06009 Sequoiadendron giganteum HOM05D000595 ORTHO05D008454 9.6e-06 55.8 71 33.8


User provided reference genes

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