Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c9_2910 Physcomitrium patens HOM05D000002 ORTHO05D050328 5.9e-46 187.2 95 100.0
Pp3c9_10660 Physcomitrium patens HOM05D000002 ORTHO05D050328 4.8e-24 114.4 95 64.2
Pp3c4_5910 Physcomitrium patens HOM05D000002 ORTHO05D000001 8.2e-24 113.6 94 61.7
Pp3c17_21230 Physcomitrium patens HOM05D000002 ORTHO05D000001 2.7e-22 108.6 94 60.6
Pp3c25_11001 Physcomitrium patens HOM05D000002 ORTHO05D000001 4.5e-22 107.8 94 59.6
Pp3c5_21060 Physcomitrium patens HOM05D000002 ORTHO05D000001 1.0e-21 106.7 94 59.6
Pp3c23_1320 Physcomitrium patens HOM05D000002 ORTHO05D000001 2.1e-19 99.0 94 55.3
Pp3c18_3680 Physcomitrium patens HOM05D000002 ORTHO05D000001 1.0e-18 96.7 94 55.3
Pp3c10_10414 Physcomitrium patens HOM05D000002 ORTHO05D000001 3.7e-16 88.2 84 56.0
Pp3c19_10880 Physcomitrium patens HOM05D000002 ORTHO05D000001 5.4e-15 84.3 91 50.5
Pp3c27_1230 Physcomitrium patens HOM05D000002 ORTHO05D000001 1.3e-13 79.7 77 48.1
Pp3c3_12360 Physcomitrium patens HOM05D000002 ORTHO05D000001 2.3e-13 79.0 94 44.7
Pp3c7_15950 Physcomitrium patens HOM05D000002 ORTHO05D000001 9.5e-12 73.6 67 58.2
Duzib114G0941 Durio zibethinus HOM05D000002 ORTHO05D000001 1.5e-09 66.2 94 40.4
HanXRQChr14g0429821 Helianthus annuus HOM05D000002 ORTHO05D000001 2.8e-08 62.0 94 40.4
Pp3c4_17810 Physcomitrium patens HOM05D000002 ORTHO05D309527 3.7e-08 61.6 71 45.1
FvH4_3g03543 Fragaria vesca HOM05D000002 ORTHO05D000001 4.9e-08 61.2 94 36.2
HanXRQChr11g0322801 Helianthus annuus HOM05D000002 ORTHO05D000001 6.3e-08 60.8 94 39.4
HanXRQChr12g0366491 Helianthus annuus HOM05D000002 ORTHO05D000001 8.3e-08 60.5 94 37.2
FvH4_5g12471 Fragaria vesca HOM05D000002 ORTHO05D000001 1.4e-07 59.7 94 35.1
FvH4_7g32173 Fragaria vesca HOM05D000002 ORTHO05D000001 1.8e-07 59.3 94 37.2
Pp3c2_27170 Physcomitrium patens HOM05D009518 ORTHO05D012005 1.8e-07 59.3 87 37.9
SHI10983 Sapria himalayana HOM05D000002 ORTHO05D000001 1.8e-07 59.3 93 37.6
CSS0004228 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.4e-07 58.9 94 37.2
HanXRQChr15g0467201 Helianthus annuus HOM05D000002 ORTHO05D000001 3.1e-07 58.5 94 36.2
SHI30598 Sapria himalayana HOM05D000002 ORTHO05D000001 3.1e-07 58.5 93 37.6
RcHm_v2.0_Chr6g0259691 Rosa chinensis HOM05D000002 ORTHO05D000001 4.1e-07 58.2 94 35.1
SHI31274 Sapria himalayana HOM05D000002 ORTHO05D000001 4.1e-07 58.2 93 36.6
Eucgr.H04355 Eucalyptus grandis HOM05D000129 ORTHO05D000144 7.0e-07 57.4 94 38.3
SHI10886 Sapria himalayana HOM05D000002 ORTHO05D000001 7.0e-07 57.4 93 36.6
SHI27120 Sapria himalayana HOM05D000002 ORTHO05D000001 7.0e-07 57.4 93 36.6
HanXRQChr02g0038571 Helianthus annuus HOM05D000002 ORTHO05D000001 9.2e-07 57.0 94 37.2
Pp3c3_18110 Physcomitrium patens HOM05D000002 ORTHO05D000001 9.2e-07 57.0 51 54.9
SEGI_06978 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 9.2e-07 57.0 94 36.2
SEGI_19459 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 9.2e-07 57.0 89 34.8
SEGI_40529 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 9.2e-07 57.0 89 34.8
TPR.G35632 Trifolium pratense HOM05D000002 ORTHO05D000001 9.2e-07 57.0 94 37.2
HanXRQChr10g0310951 Helianthus annuus HOM05D000002 ORTHO05D000001 1.2e-06 56.6 94 39.4
HanXRQChr11g0342821 Helianthus annuus HOM05D000002 ORTHO05D000001 1.2e-06 56.6 94 39.4
HanXRQChr05g0136641 Helianthus annuus HOM05D000309 ORTHO05D000001 1.6e-06 56.2 94 35.1
Sopen05g025270 Solanum pennellii HOM05D000002 ORTHO05D000001 1.6e-06 56.2 93 35.5
MD03G1006900 Malus domestica HOM05D000002 ORTHO05D000001 2.0e-06 55.8 94 37.2
SHI29599 Sapria himalayana HOM05D000002 ORTHO05D000001 2.0e-06 55.8 93 37.6
SHI45192 Sapria himalayana HOM05D000002 ORTHO05D000001 2.0e-06 55.8 93 36.6
ECA240G1968 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.7e-06 55.5 94 36.2
QL03p042293 Quercus lobata HOM05D000002 ORTHO05D000001 2.7e-06 55.5 94 35.1
QL04p083744 Quercus lobata HOM05D000002 ORTHO05D000001 2.7e-06 55.5 94 35.1
QL12p033733 Quercus lobata HOM05D000002 ORTHO05D000001 2.7e-06 55.5 94 35.1
SHI18624 Sapria himalayana HOM05D000002 ORTHO05D000001 2.7e-06 55.5 93 35.5
SHI09145 Sapria himalayana HOM05D000002 ORTHO05D000001 3.5e-06 55.1 94 33.0
HanXRQChr17g0552501 Helianthus annuus HOM05D000002 ORTHO05D000001 4.5e-06 54.7 94 37.2
QL09p045312 Quercus lobata HOM05D000002 ORTHO05D000001 4.5e-06 54.7 94 36.2
RcHm_v2.0_Chr5g0064021 Rosa chinensis HOM05D000002 ORTHO05D000001 4.5e-06 54.7 94 33.0
SHI00961 Sapria himalayana HOM05D000002 ORTHO05D000001 4.5e-06 54.7 93 36.6
SHI11906 Sapria himalayana HOM05D000002 ORTHO05D000001 4.5e-06 54.7 93 37.6
SHI12257 Sapria himalayana HOM05D000002 ORTHO05D000001 4.5e-06 54.7 93 35.5
SHI40184 Sapria himalayana HOM05D000002 ORTHO05D000001 4.5e-06 54.7 93 35.5
SHI46443 Sapria himalayana HOM05D000002 ORTHO05D000001 4.5e-06 54.7 93 35.5
SEGI_23153 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 4.5e-06 54.7 94 31.9
AagrBONN_evm.TU.Sc2ySwM_117.3637 Anthoceros agrestis HOM05D000002 ORTHO05D000001 5.9e-06 54.3 94 37.2
HanXRQChr02g0039101 Helianthus annuus HOM05D000002 ORTHO05D000001 5.9e-06 54.3 94 37.2
HanXRQChr02g0050541 Helianthus annuus HOM05D000002 ORTHO05D000001 5.9e-06 54.3 94 34.0
HanXRQChr06g0173631 Helianthus annuus HOM05D000002 ORTHO05D000001 5.9e-06 54.3 94 37.2
MD05G1104800 Malus domestica HOM05D000002 ORTHO05D000001 5.9e-06 54.3 94 34.0
SHI04810 Sapria himalayana HOM05D000002 ORTHO05D000001 5.9e-06 54.3 93 35.5
SHI09772 Sapria himalayana HOM05D000002 ORTHO05D000001 5.9e-06 54.3 93 36.6
SHI43735 Sapria himalayana HOM05D000002 ORTHO05D000001 5.9e-06 54.3 93 36.6
TPR.G27623 Trifolium pratense HOM05D000002 ORTHO05D000001 5.9e-06 54.3 81 35.8
MD09G1044700 Malus domestica HOM05D000002 ORTHO05D000001 7.8e-06 53.9 94 34.0
Nn5g29126 Nelumbo nucifera HOM05D000002 ORTHO05D000001 7.8e-06 53.9 94 34.0
SHI27914 Sapria himalayana HOM05D000002 ORTHO05D000001 7.8e-06 53.9 93 35.5
SHI31808 Sapria himalayana HOM05D000002 ORTHO05D000001 7.8e-06 53.9 93 36.6


User provided reference genes

Program Settings