Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c9_2809 Physcomitrium patens HOM05D006771 ORTHO05D008296 9.4e-236 820.1 498 100.0
Pp3c9_2800 Physcomitrium patens HOM05D006771 ORTHO05D008296 2.4e-231 805.4 491 100.0
Pp3c15_7000 Physcomitrium patens HOM05D006771 ORTHO05D008296 2.3e-93 347.1 321 68.2
Mapoly0003s0143 Marchantia polymorpha HOM05D006771 ORTHO05D008296 5.6e-31 139.8 129 51.9
AagrBONN_evm.TU.Sc2ySwM_344.5001 Anthoceros agrestis HOM05D062329 ORTHO05D008296 2.1e-30 137.9 137 48.2
SEGI_22775 Sequoiadendron giganteum HOM05D006771 ORTHO05D008296 2.6e-28 131.0 231 35.1
Dinv36762 Davidia involucrata HOM05D006771 ORTHO05D008296 5.5e-18 96.7 176 34.7
TAR624G0646 Trochodendron aralioides HOM05D006771 ORTHO05D008296 5.5e-18 96.7 161 33.5
Nn8g38880 Nelumbo nucifera HOM05D006771 ORTHO05D008296 7.1e-18 96.3 192 32.8
Hund06680 Selenicereus undatus HOM05D006771 ORTHO05D008296 9.3e-18 95.9 143 37.1
CANSAT56G0603 Cannabis sativa HOM05D006771 ORTHO05D008296 1.6e-17 95.1 137 38.7
vmacro23430 Vaccinium macrocarpon HOM05D006771 ORTHO05D008296 1.6e-17 95.1 189 35.4
DCAR_024688 Daucus carota HOM05D006771 ORTHO05D008296 2.1e-17 94.7 194 33.5
DCAR_031968 Daucus carota HOM05D006771 ORTHO05D008296 2.1e-17 94.7 163 35.0
FvH4_1g07370 Fragaria vesca HOM05D006771 ORTHO05D008296 2.1e-17 94.7 196 33.7
FAN23G2606 Fragaria x ananassa HOM05D006771 ORTHO05D008296 3.5e-17 94.0 196 34.2
vmacro06287 Vaccinium macrocarpon HOM05D006771 ORTHO05D008296 3.5e-17 94.0 160 36.9
FAN28G0978 Fragaria x ananassa HOM05D006771 ORTHO05D008296 6.0e-17 93.2 147 36.7
PSO832G0455 Papaver somniferum HOM05D006771 ORTHO05D008296 6.0e-17 93.2 139 36.0
Thecc.09G090100 Theobroma cacao HOM05D006771 ORTHO05D008296 6.0e-17 93.2 141 36.9
FAN26G2123 Fragaria x ananassa HOM05D006771 ORTHO05D008296 7.9e-17 92.8 196 33.2
Gohir.A06G072300 Gossypium hirsutum HOM05D006771 ORTHO05D008296 7.9e-17 92.8 143 37.8
RcHm_v2.0_Chr2g0093251 Rosa chinensis HOM05D006771 ORTHO05D008296 7.9e-17 92.8 137 38.7
PSO063G0725 Papaver somniferum HOM05D006771 ORTHO05D008296 1.8e-16 91.7 139 35.3
Sc18g0002030 Simmondsia chinensis HOM05D006771 ORTHO05D008296 1.8e-16 91.7 140 35.7
MD15G1206500 Malus domestica HOM05D006771 ORTHO05D008296 2.3e-16 91.3 138 36.2
Prupe.7G210300 Prunus persica HOM05D006771 ORTHO05D008296 2.3e-16 91.3 137 37.2
Atru.chr7.1582 Acer truncatum HOM05D006771 ORTHO05D008296 3.0e-16 90.9 137 40.1
Duzib168G0935 Durio zibethinus HOM05D006771 ORTHO05D008296 3.0e-16 90.9 141 36.9
Duzib187G1830 Durio zibethinus HOM05D006771 ORTHO05D008296 3.0e-16 90.9 141 36.2
Actinidia29883 Actinidia chinensis HOM05D006771 ORTHO05D008296 6.7e-16 89.7 137 36.5
Oeu042645.4 Olea europaea HOM05D006771 ORTHO05D008296 6.7e-16 89.7 139 36.7
Gohir.D06G070900 Gossypium hirsutum HOM05D006771 ORTHO05D008296 1.1e-15 89.0 143 38.5
CDE06G0351 Ceratophyllum demersum HOM05D006771 ORTHO05D008296 1.9e-15 88.2 166 31.9
GSVIVG01015209001 Vitis vinifera HOM05D006771 ORTHO05D008296 1.9e-15 88.2 217 31.3
Ah.14g085210 Amaranthus hybridus HOM05D006771 ORTHO05D008296 2.5e-15 87.8 142 36.6
AUR62027498 Chenopodium quinoa HOM05D006771 ORTHO05D008296 3.3e-15 87.4 142 37.3
Ciclev10010605m.g Citrus clementina HOM05D006771 ORTHO05D008296 4.3e-15 87.0 145 35.9
Psat1g141720 Pisum sativum HOM05D006771 ORTHO05D008296 4.3e-15 87.0 143 38.5
FAN26G3254 Fragaria x ananassa HOM05D006771 ORTHO05D008296 5.7e-15 86.7 199 32.7
CsaV3_2G001480 Cucumis sativus L. HOM05D006771 ORTHO05D008296 9.6e-15 85.9 137 35.0
Gorai.010G082600 Gossypium raimondii HOM05D006771 ORTHO05D008296 9.6e-15 85.9 144 36.8
Sed0013958 Sechium edule HOM05D006771 ORTHO05D008296 9.6e-15 85.9 137 34.3
COL.COLO4_18206 Corchorus olitorius HOM05D006771 ORTHO05D008296 1.3e-14 85.5 137 35.8
ClCG11G001770 Citrullus lanatus HOM05D006771 ORTHO05D008296 1.6e-14 85.1 136 35.3
Aqoxy7G01223_Aqoxy7G01224 Aquilegia oxysepala HOM05D006771 ORTHO05D008296 2.8e-14 84.3 141 35.5
arahy.Tifrunner.gnm1.ann1.LUTY24 Arachis hypogaea HOM05D006771 ORTHO05D008296 2.8e-14 84.3 143 35.0
FAN19G1581 Fragaria x ananassa HOM05D006771 ORTHO05D008296 2.8e-14 84.3 132 38.6
HanXRQChr10g0319291 Helianthus annuus HOM05D006771 ORTHO05D008296 2.8e-14 84.3 137 36.5
Eucgr.C03649 Eucalyptus grandis HOM05D006771 ORTHO05D008296 3.7e-14 84.0 136 33.1
Eucgr.C03893 Eucalyptus grandis HOM05D006771 ORTHO05D008296 4.8e-14 83.6 136 33.1
TWI63G0991 Tripterygium wilfordii HOM05D006771 ORTHO05D008296 6.3e-14 83.2 137 35.0
Ca_02153_v3 Cicer arietinum L. HOM05D006771 ORTHO05D008296 8.2e-14 82.8 143 35.7
HanXRQChr12g0354831 Helianthus annuus HOM05D006771 ORTHO05D008296 8.2e-14 82.8 137 36.5
Manes.03G033100 Manihot esculenta HOM05D006771 ORTHO05D008296 8.2e-14 82.8 141 33.3
QL02p062800 Quercus lobata HOM05D006771 ORTHO05D008296 8.2e-14 82.8 100 40.0
Nitab4.5_0005033g0010 Nicotiana tabacum HOM05D006771 ORTHO05D008296 1.4e-13 82.0 138 33.3
Lalb_Chr08g0232051 Lupinus albus HOM05D006771 ORTHO05D008296 2.4e-13 81.3 139 36.7
arahy.Tifrunner.gnm1.ann1.H0G9IY Arachis hypogaea HOM05D006771 ORTHO05D008296 3.1e-13 80.9 143 34.3
ECA234G3532 Erigeron canadensis HOM05D006771 ORTHO05D008296 3.1e-13 80.9 137 36.5
Phvul.009G232800 Phaseolus vulgaris HOM05D006771 ORTHO05D008296 5.3e-13 80.1 143 35.7
Gohir.A07G010700 Gossypium hirsutum HOM05D006771 ORTHO05D008296 9.0e-13 79.3 140 34.3
Glyma.15G169200 Glycine max HOM05D006771 ORTHO05D008296 1.2e-12 79.0 141 34.8
Medtr2g038710 Medicago truncatula HOM05D006771 ORTHO05D008296 1.2e-12 79.0 140 35.7
CiPaw.03G216900 Carya illinoinensis HOM05D006771 ORTHO05D008296 1.5e-12 78.6 208 28.4
Glyma.09G062700 Glycine max HOM05D006771 ORTHO05D008296 1.5e-12 78.6 143 35.0
TPR.G35458 Trifolium pratense HOM05D006771 ORTHO05D008296 2.0e-12 78.2 210 29.5
Migut.L01489 Erythranthe guttata HOM05D006771 ORTHO05D008296 2.6e-12 77.8 198 28.3
Lsat_1_v5_gn_5_142241 Lactuca sativa HOM05D006771 ORTHO05D008296 3.4e-12 77.4 80 46.2
SalBow1G1031 Salvia bowleyana HOM05D006771 ORTHO05D008296 3.4e-12 77.4 139 31.7
Cfa003093 Carpinus fangiana HOM05D006771 ORTHO05D008296 4.5e-12 77.0 176 30.7
ATR0716G111 Amborella trichopoda HOM05D006771 ORTHO05D008296 1.3e-11 75.5 127 37.0
Cc06_g11360 Coffea canephora HOM05D006771 ORTHO05D008296 1.3e-11 75.5 208 28.8
CAN.G235.1 Capsicum annuum HOM05D006771 ORTHO05D008296 2.2e-11 74.7 88 38.6
Gohir.D07G011000 Gossypium hirsutum HOM05D006771 ORTHO05D008296 2.2e-11 74.7 143 32.9
Gorai.001G011400 Gossypium raimondii HOM05D006771 ORTHO05D008296 2.2e-11 74.7 143 32.9
Nitab4.5_0005634g0020 Nicotiana tabacum HOM05D006771 ORTHO05D008296 2.9e-11 74.3 87 37.9
Potri.006G151100 Populus trichocarpa HOM05D006771 ORTHO05D008296 3.8e-11 73.9 140 32.1
AT5G56850 Arabidopsis thaliana HOM05D006771 ORTHO05D008296 8.5e-11 72.8 140 32.1
CBR_g20330 Chara braunii HOM05D006771 ORTHO05D008296 8.5e-11 72.8 150 31.3
PGSC0003DMG401013152 Solanum tuberosum HOM05D006771 ORTHO05D008296 8.5e-11 72.8 95 36.8
AL8G32700 Arabidopsis lyrata HOM05D006771 ORTHO05D008296 1.9e-10 71.6 140 31.4
PGR102G2735 Punica granatum HOM05D006771 ORTHO05D008296 2.5e-10 71.2 86 37.2
Solyc07g039190.4 Solanum lycopersicum HOM05D006771 ORTHO05D008296 2.5e-10 71.2 93 37.6
Sp6g18570 Schrenkiella parvula HOM05D006771 ORTHO05D008296 4.2e-10 70.5 140 31.4
BcaB01g04422 Brassica carinata HOM05D006771 ORTHO05D008296 7.2e-10 69.7 216 28.7
Thhalv10013398m.g Eutrema salsugineum HOM05D006771 ORTHO05D008296 7.2e-10 69.7 140 32.9
Peaxi162Scf01121g00112 Petunia axillaris HOM05D006771 ORTHO05D008296 7.2e-10 69.7 111 32.4
Carub.0008s1731 Capsella rubella HOM05D006771 ORTHO05D008296 1.6e-09 68.6 140 30.7
MBI04_g34126_MAGBIO Magnolia biondii HOM05D006771 ORTHO05D008296 1.6e-09 68.6 178 29.8
A03p13130 Brassica napus HOM05D006771 ORTHO05D008296 3.6e-09 67.4 207 28.5
BolC3t13977H Brassica oleracea HOM05D006771 ORTHO05D008296 3.6e-09 67.4 207 28.0
BraA03t10624Z Brassica rapa HOM05D006771 ORTHO05D008296 7.9e-09 66.2 204 28.9
Rhsim03G0232900 Rhododendron simsii HOM05D006771 ORTHO05D008296 1.0e-08 65.9 95 38.9
C03p15350 Brassica napus HOM05D006771 ORTHO05D008296 1.8e-08 65.1 207 28.0
Os05g0232200 Oryza sativa ssp. japonica HOM05D006771 ORTHO05D008296 2.3e-08 64.7 84 32.1
Zm00001eb345250 Zea mays HOM05D006771 ORTHO05D008296 3.0e-08 64.3 82 35.4
Lj6g0004334 Lotus japonicus HOM05D006771 ORTHO05D008296 1.5e-07 62.0 124 31.5
SGA_v2.0_scaffold21G09363 Striga asiatica HOM05D006771 ORTHO05D008296 4.3e-07 60.5 100 32.0
Sabra06G0119600 Salix brachista HOM05D006771 ORTHO05D008296 5.7e-07 60.1 133 27.1
unitig_699.g19301 Utricularia gibba HOM05D006771 ORTHO05D008296 7.4e-07 59.7 79 35.4
VMungo1309G1333 Vigna mungo HOM05D006771 ORTHO05D008296 2.2e-06 58.2 78 38.5


User provided reference genes

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