Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c9_24660 Physcomitrium patens HOM05D011382 ORTHO05D312881 3.5e-288 994.2 481 100.0
Pp3c15_23690 Physcomitrium patens HOM05D011382 ORTHO05D312763 2.2e-125 453.4 379 58.3
Pp3c15_23620 Physcomitrium patens HOM05D011382 ORTHO05D311375 3.7e-80 303.1 381 42.3
Pp3c22_15880 Physcomitrium patens HOM05D011382 ORTHO05D313128 2.1e-59 234.2 395 37.2
Pp3c10_1600 Physcomitrium patens HOM05D011382 ORTHO05D317580 8.1e-59 232.3 406 37.2
Pp3c5_2310 Physcomitrium patens HOM05D011382 ORTHO05D315424 7.5e-57 225.7 395 35.7
Pp3c2_32940 Physcomitrium patens HOM05D011382 ORTHO05D316563 2.9e-56 223.8 443 33.4
Pp3c10_1580 Physcomitrium patens HOM05D011382 ORTHO05D315360 1.2e-54 218.4 428 32.9
Pp3c6_7720 Physcomitrium patens HOM05D011382 ORTHO05D308313 2.8e-51 207.2 437 33.6
Pp3c3_330 Physcomitrium patens HOM05D011382 ORTHO05D316477 2.3e-45 187.6 405 33.1
Pp3c4_22330 Physcomitrium patens HOM05D011382 ORTHO05D314084 9.6e-44 182.2 493 27.6
Pp3c18_20430 Physcomitrium patens HOM05D011382 ORTHO05D312826 3.3e-36 157.1 304 33.6
Pp3c24_3650 Physcomitrium patens HOM05D011382 ORTHO05D002895 4.3e-36 156.8 395 28.4
Pp3c9_2230 Physcomitrium patens HOM05D011382 ORTHO05D309008 1.7e-29 134.8 282 32.3
MapolyY_A0023 Marchantia polymorpha HOM05D002809 ORTHO05D004563 5.5e-23 113.2 267 32.2
Pp3c14_23730 Physcomitrium patens HOM05D002809 ORTHO05D004563 2.6e-17 94.4 258 28.7
AagrBONN_evm.TU.Sc2ySwM_344.2438 Anthoceros agrestis HOM05D002809 ORTHO05D004939 1.4e-15 88.6 295 29.2
Nn5g28167 Nelumbo nucifera HOM05D002809 ORTHO05D004939 2.1e-14 84.7 239 26.4
Pp3c11_18710 Physcomitrium patens HOM05D004302 ORTHO05D004939 3.5e-14 84.0 321 26.5
Pp3c16_16640 Physcomitrium patens HOM05D011382 ORTHO05D310111 7.9e-14 82.8 355 24.8
SMO361G0323 Selaginella moellendorffii HOM05D002809 ORTHO05D004939 7.9e-14 82.8 293 25.3
Pp3c15_11120 Physcomitrium patens HOM05D002809 ORTHO05D010190 1.3e-13 82.0 265 25.3
SEGI_38976 Sequoiadendron giganteum HOM05D002809 ORTHO05D004939 1.8e-13 81.6 231 26.8
Mapoly0012s0051 Marchantia polymorpha HOM05D018443 ORTHO05D015161 2.3e-13 81.3 291 25.4
Mapoly0004s0242 Marchantia polymorpha HOM05D002809 ORTHO05D010190 8.7e-13 79.3 339 27.1
Pp3c3_5460 Physcomitrium patens HOM05D002809 ORTHO05D004563 2.5e-12 77.8 256 26.2
Pp3c14_15830 Physcomitrium patens HOM05D002809 ORTHO05D009385 4.3e-12 77.0 248 28.2
Mapoly0125s0029 Marchantia polymorpha HOM05D002809 ORTHO05D009091 5.7e-12 76.6 267 26.2
AagrBONN_evm.TU.Sc2ySwM_117.3877 Anthoceros agrestis HOM05D005500 ORTHO05D006906 7.4e-12 76.3 275 26.9
Mapoly0002s0187 Marchantia polymorpha HOM05D002809 ORTHO05D004563 1.6e-11 75.1 332 24.1
Mapoly0005s0140 Marchantia polymorpha HOM05D002809 ORTHO05D004563 1.6e-11 75.1 273 27.1
SEGI_36099 Sequoiadendron giganteum HOM05D003005 ORTHO05D030467 1.6e-11 75.1 273 26.0
Pp3c19_15800 Physcomitrium patens HOM05D007753 ORTHO05D009385 2.1e-11 74.7 310 25.5
Pp3c26_14690 Physcomitrium patens HOM05D004302 ORTHO05D004939 3.7e-11 73.9 227 27.8
Pp3c22_13680 Physcomitrium patens HOM05D007753 ORTHO05D009385 4.8e-11 73.6 277 26.7
SMO116G0047 Selaginella moellendorffii HOM05D002809 ORTHO05D004563 2.4e-10 71.2 159 32.7
Pp3c26_2110 Physcomitrium patens HOM05D011382 ORTHO05D318660 4.1e-10 70.5 148 31.1
Pp3c7_9930 Physcomitrium patens HOM05D002809 ORTHO05D004939 4.1e-10 70.5 302 26.5
Mapoly0063s0081 Marchantia polymorpha HOM05D002809 ORTHO05D004563 5.3e-10 70.1 227 26.0
AagrBONN_evm.TU.Sc2ySwM_228.846 Anthoceros agrestis HOM05D002809 ORTHO05D004939 1.2e-09 68.9 287 26.8
Pp3c1_27000 Physcomitrium patens HOM05D002809 ORTHO05D004563 1.2e-09 68.9 203 31.0
Sp1g23570 Schrenkiella parvula HOM05D002809 ORTHO05D004563 1.2e-09 68.9 277 26.7
SalBow8G4721 Salvia bowleyana HOM05D007162 ORTHO05D007631 2.0e-09 68.2 277 24.5
A09p38610 Brassica napus HOM05D002809 ORTHO05D004563 2.6e-09 67.8 292 26.0
A07p11920 Brassica napus HOM05D002809 ORTHO05D004563 4.5e-09 67.0 244 27.9
BraA09t39366Z Brassica rapa HOM05D002809 ORTHO05D004563 4.5e-09 67.0 293 25.6
ATR0763G218 Amborella trichopoda HOM05D005977 ORTHO05D007546 5.9e-09 66.6 318 25.8
Mapoly0063s0077 Marchantia polymorpha HOM05D002809 ORTHO05D004939 5.9e-09 66.6 266 26.3
PGR119G2572 Punica granatum HOM05D002809 ORTHO05D004563 5.9e-09 66.6 262 26.0
Mapoly0101s0058 Marchantia polymorpha HOM05D002809 ORTHO05D004939 7.6e-09 66.2 250 25.2
AT1G27340 Arabidopsis thaliana HOM05D002809 ORTHO05D004563 1.0e-08 65.9 252 26.6
BolC5t31323H Brassica oleracea HOM05D002809 ORTHO05D004563 1.0e-08 65.9 273 26.4
BcaC05g26549 Brassica carinata HOM05D002809 ORTHO05D004563 1.3e-08 65.5 273 26.4
C05p26040 Brassica napus HOM05D002809 ORTHO05D004563 8.4e-08 62.8 273 26.0
C07p17870 Brassica napus HOM05D002809 ORTHO05D004563 1.1e-07 62.4 244 26.2
BolC7t42293H Brassica oleracea HOM05D002809 ORTHO05D004563 1.1e-07 62.4 244 26.2
CARHR026910 Cardamine hirsuta HOM05D002809 ORTHO05D004563 1.4e-07 62.0 272 25.7
Mapoly0001s0513 Marchantia polymorpha HOM05D008342 ORTHO05D010190 1.9e-07 61.6 181 28.2
Mapoly0119s0024 Marchantia polymorpha HOM05D007853 ORTHO05D009873 7.2e-07 59.7 204 25.0
Mapoly0072s0056 Marchantia polymorpha HOM05D004302 ORTHO05D004939 7.9e-06 56.2 219 25.6


User provided reference genes

Program Settings