Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c9_23950 Physcomitrium patens HOM05D007819 ORTHO05D009848 3.1e-276 954.5 479 100.0
Pp3c15_22830 Physcomitrium patens HOM05D007819 ORTHO05D009848 1.1e-233 813.1 476 86.1
Mapoly0155s0016 Marchantia polymorpha HOM05D007819 ORTHO05D009848 2.2e-149 533.1 509 57.4
Mapoly0035s0019 Marchantia polymorpha HOM05D007819 ORTHO05D009848 1.6e-139 500.4 501 53.9
Mapoly0008s0213 Marchantia polymorpha HOM05D007819 ORTHO05D009848 7.8e-139 498.0 503 54.9
AagrBONN_evm.TU.Sc2ySwM_344.1297 Anthoceros agrestis HOM05D007819 ORTHO05D009848 4.6e-131 472.2 539 51.4
AagrBONN_evm.TU.Sc2ySwM_344.3840 Anthoceros agrestis HOM05D007819 ORTHO05D009848 1.5e-129 467.2 439 58.8
Nn2g10668 Nelumbo nucifera HOM05D007819 ORTHO05D009848 4.5e-70 269.6 283 47.7
PSO339G1273 Papaver somniferum HOM05D007819 ORTHO05D009848 7.7e-70 268.9 254 49.2
TAR623G0280 Trochodendron aralioides HOM05D007819 ORTHO05D009848 1.0e-69 268.5 256 50.0
PSO384G2242 Papaver somniferum HOM05D007819 ORTHO05D009848 1.3e-69 268.1 254 48.8
Manes.04G025500 Manihot esculenta HOM05D007819 ORTHO05D009848 2.2e-69 267.3 257 51.4
CANSAT54G2163 Cannabis sativa HOM05D007819 ORTHO05D009848 2.9e-69 266.9 255 51.4
Gohir.A09G105900 Gossypium hirsutum HOM05D007819 ORTHO05D009848 5.0e-69 266.2 249 51.0
PGR102G1079 Punica granatum HOM05D007819 ORTHO05D009848 8.5e-69 265.4 249 51.4
COL.COLO4_25254 Corchorus olitorius HOM05D007819 ORTHO05D009848 1.1e-68 265.0 239 53.1
Gohir.D05G077600 Gossypium hirsutum HOM05D007819 ORTHO05D009848 2.5e-68 263.8 289 45.7
Gorai.009G079100 Gossypium raimondii HOM05D007819 ORTHO05D009848 2.5e-68 263.8 289 45.7
Thecc.09G261200 Theobroma cacao HOM05D007819 ORTHO05D009848 2.5e-68 263.8 249 50.2
Oeu017391.1 Olea europaea HOM05D007819 ORTHO05D009848 7.2e-68 262.3 254 48.8
Gohir.A05G074800 Gossypium hirsutum HOM05D007819 ORTHO05D009848 9.4e-68 261.9 289 45.7
TWI75G0698 Tripterygium wilfordii HOM05D007819 ORTHO05D009848 9.4e-68 261.9 302 45.0
Gohir.D09G102600 Gossypium hirsutum HOM05D007819 ORTHO05D009848 1.2e-67 261.5 249 50.2
Gorai.006G121000 Gossypium raimondii HOM05D007819 ORTHO05D009848 1.2e-67 261.5 249 50.2
RcHm_v2.0_Chr5g0060991 Rosa chinensis HOM05D007819 ORTHO05D009848 1.2e-67 261.5 256 49.2
Cpa.g.sc318.6 Carica papaya HOM05D007819 ORTHO05D009848 1.6e-67 261.2 293 45.4
Sopen06g001100 Solanum pennellii HOM05D007819 ORTHO05D009848 2.7e-67 260.4 286 47.2
Migut.N02626 Erythranthe guttata HOM05D007819 ORTHO05D009848 3.6e-67 260.0 277 48.4
FAN21G3467 Fragaria x ananassa HOM05D007819 ORTHO05D009848 8.0e-67 258.8 250 49.2
Duzib168G1088 Durio zibethinus HOM05D007819 ORTHO05D009848 1.4e-66 258.1 264 48.5
Gohir.A05G074866 Gossypium hirsutum HOM05D007819 ORTHO05D009848 4.0e-66 256.5 289 45.0
FAN25G2530 Fragaria x ananassa HOM05D007819 ORTHO05D009848 5.2e-66 256.1 250 48.8
Eucgr.B02464 Eucalyptus grandis HOM05D007819 ORTHO05D009848 2.0e-65 254.2 246 48.4
CiPaw.14G077700 Carya illinoinensis HOM05D007819 ORTHO05D009848 5.7e-65 252.7 249 48.2
Atru.chr3.3713 Acer truncatum HOM05D007819 ORTHO05D009848 7.5e-65 252.3 301 42.9
CiPaw.13G106200 Carya illinoinensis HOM05D007819 ORTHO05D009848 6.3e-64 249.2 255 46.3
MD11G1124900 Malus domestica HOM05D007819 ORTHO05D009848 6.3e-64 249.2 247 47.4
Cc01_g11630 Coffea canephora HOM05D007819 ORTHO05D009848 1.4e-63 248.1 244 48.4
MD03G1111000 Malus domestica HOM05D007819 ORTHO05D009848 1.2e-62 245.0 247 47.4
Lsat_1_v5_gn_2_25861 Lactuca sativa HOM05D007819 ORTHO05D009848 5.0e-61 239.6 243 47.7
Mapoly0103s0031 Marchantia polymorpha HOM05D007819 ORTHO05D009848 2.5e-60 237.3 254 47.2
Hma1.2p1_2033F.1_g311900 Hydrangea macrophylla HOM05D007819 ORTHO05D009848 2.8e-59 233.8 254 46.1
QL01p036876 Quercus lobata HOM05D007819 ORTHO05D009848 4.0e-58 229.9 266 42.5
CiPaw.13G106300 Carya illinoinensis HOM05D007819 ORTHO05D009848 7.5e-57 225.7 233 46.8
DCAR_005475 Daucus carota HOM05D007819 ORTHO05D009848 1.7e-56 224.6 211 50.7
Nitab4.5_0007369g0010 Nicotiana tabacum HOM05D007819 ORTHO05D009848 8.3e-56 222.2 278 41.0
unitig_699.g19198 Utricularia gibba HOM05D007819 ORTHO05D009848 1.4e-55 221.5 256 42.2
FvH4_3g33520 Fragaria vesca HOM05D007819 ORTHO05D009848 4.1e-55 219.9 210 51.0
Nitab4.5_0000888g0180 Nicotiana tabacum HOM05D007819 ORTHO05D009848 4.1e-55 219.9 271 41.7
CiPaw.14G077600 Carya illinoinensis HOM05D007819 ORTHO05D009848 5.4e-55 219.5 259 42.1
FAN16G1444 Fragaria x ananassa HOM05D007819 ORTHO05D009848 5.4e-55 219.5 324 37.3
HPP92_025075 Vanilla planifolia HOM05D007819 ORTHO05D009848 5.4e-55 219.5 254 41.7
Pp3c21_1570 Physcomitrium patens HOM05D007819 ORTHO05D009848 7.0e-55 219.2 286 42.7
AUR62006507 Chenopodium quinoa HOM05D007819 ORTHO05D009848 3.0e-53 213.8 277 39.7
Zm00001eb013150 Zea mays HOM05D007819 ORTHO05D009848 2.1e-51 207.6 257 40.9
Sc21g0003720 Simmondsia chinensis HOM05D007819 ORTHO05D009848 1.8e-50 204.5 210 48.1
Mapoly0088s0067 Marchantia polymorpha HOM05D000370 ORTHO05D001335 3.1e-50 203.8 282 38.7
Lj1A183T52 Lonicera japonica HOM05D007819 ORTHO05D009848 1.2e-49 201.8 251 43.8
Pp3c12_18930 Physcomitrium patens HOM05D000370 ORTHO05D009848 1.5e-49 201.4 289 38.4
Pp3c12_18938 Physcomitrium patens HOM05D000370 ORTHO05D009848 1.5e-49 201.4 289 38.4
Pp3c3_24540 Physcomitrium patens HOM05D007819 ORTHO05D009848 1.5e-49 201.4 291 39.2
Haze_23935 Corylus avellana HOM05D007819 ORTHO05D009848 2.2e-48 197.6 203 48.8
Prupe.6G093600 Prunus persica HOM05D007819 ORTHO05D009848 1.2e-46 191.8 183 51.4
Solyc06g005100.3 Solanum lycopersicum HOM05D007819 ORTHO05D009848 8.1e-43 179.1 201 45.8
Peaxi162Scf00389g00619 Petunia axillaris HOM05D007819 ORTHO05D009848 8.9e-42 175.6 244 40.2
Nitab4.5_0001578g0010 Nicotiana tabacum HOM05D007819 ORTHO05D009848 1.5e-41 174.9 230 40.4
Ciclev10029813m.g Citrus clementina HOM05D007819 ORTHO05D009848 9.8e-41 172.2 243 37.9
Dinv32800 Davidia involucrata HOM05D007819 ORTHO05D009848 1.3e-40 171.8 189 45.5
SGA_v2.0_scaffold2G00920 Striga asiatica HOM05D007819 ORTHO05D009848 1.9e-39 167.9 242 38.0
Nitab4.5_0000022g0250 Nicotiana tabacum HOM05D007819 ORTHO05D009848 1.7e-37 161.4 211 43.1
GSVIVG01025124001 Vitis vinifera HOM05D007819 ORTHO05D009848 5.1e-37 159.8 156 51.3
CAN.G1171.1 Capsicum annuum HOM05D007819 ORTHO05D009848 2.3e-34 151.0 277 36.5
MSTRG.12613 Avicennia marina HOM05D007819 ORTHO05D009848 4.9e-32 143.3 167 43.7
PGSC0003DMG401025397 Solanum tuberosum HOM05D007819 ORTHO05D009848 1.2e-30 138.7 150 48.0
AUR62025022 Chenopodium quinoa HOM05D007819 ORTHO05D009848 6.2e-27 126.3 198 36.9
Migut.O00707 Erythranthe guttata HOM05D007819 ORTHO05D009848 2.6e-25 120.9 138 45.7
MSTRG.12612 Avicennia marina HOM05D007819 ORTHO05D009848 1.3e-21 108.6 99 53.5
SalBow3G4000 Salvia bowleyana HOM05D007819 ORTHO05D009848 1.7e-21 108.2 106 49.1
EL10Ac9g22426 Beta vulgaris HOM05D007819 ORTHO05D009848 3.1e-18 97.4 122 41.8
CSS0001112 Camellia sinensis var. sinensis HOM05D007819 ORTHO05D009848 1.2e-17 95.5 98 51.0
CSS0025937 Camellia sinensis var. sinensis HOM05D007819 ORTHO05D009848 1.2e-17 95.5 98 51.0
QL01p036766 Quercus lobata HOM05D007819 ORTHO05D009848 3.4e-17 94.0 101 43.6
Os03g0287100 Oryza sativa ssp. japonica HOM05D007819 ORTHO05D009848 6.4e-16 89.7 105 42.9
Oeu012676.1 Olea europaea HOM05D007819 ORTHO05D009848 2.4e-15 87.8 81 48.1
QL01p036758 Quercus lobata HOM05D007819 ORTHO05D009848 2.4e-15 87.8 82 52.4
AagrBONN_evm.TU.Sc2ySwM_117.2524 Anthoceros agrestis HOM05D007819 ORTHO05D009848 3.0e-13 80.9 56 62.5
EL10Ac9g22427 Beta vulgaris HOM05D007819 ORTHO05D009848 2.4e-10 71.2 121 33.9
FAN11G3664 Fragaria x ananassa HOM05D007819 ORTHO05D009848 9.3e-07 59.3 67 46.3


User provided reference genes

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