Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c9_21990 Physcomitrium patens HOM05D005158 ORTHO05D005510 0.0e+00 1398.6 740 100.0
AagrBONN_evm.TU.Sc2ySwM_368.719 Anthoceros agrestis HOM05D005158 ORTHO05D005510 8.5e-92 342.4 501 44.5
Mapoly0003s0267 Marchantia polymorpha HOM05D032652 ORTHO05D005510 1.9e-91 341.3 571 41.3
SMO118G0092 Selaginella moellendorffii HOM05D032652 ORTHO05D005510 7.1e-46 189.9 372 38.7
SMO263G0001 Selaginella moellendorffii HOM05D032652 ORTHO05D005510 1.2e-42 179.1 360 37.2
CBR_g49491 Chara braunii HOM05D005158 ORTHO05D005510 8.9e-41 172.9 309 36.9
FvH4_5g11940 Fragaria vesca HOM05D005158 ORTHO05D005510 8.1e-26 123.2 322 28.0
Pp3c5_19920 Physcomitrium patens HOM05D005158 ORTHO05D005510 8.1e-26 123.2 307 31.3
Cc11_g08400 Coffea canephora HOM05D005158 ORTHO05D005510 6.9e-25 120.2 393 28.5
Ah.02g127790 Amaranthus hybridus HOM05D005158 ORTHO05D005510 1.5e-24 119.0 315 28.6
Cc11_g08410 Coffea canephora HOM05D005158 ORTHO05D005510 1.5e-24 119.0 333 27.9
HanXRQChr08g0212251 Helianthus annuus HOM05D005158 ORTHO05D005510 2.6e-24 118.2 317 29.3
FAN13G1699 Fragaria x ananassa HOM05D005158 ORTHO05D005510 4.4e-24 117.5 347 28.2
ClCG07G007220 Citrullus lanatus HOM05D005158 ORTHO05D005510 1.3e-23 115.9 359 28.1
PRCOL_00003969 Prasinoderma coloniale HOM05D005158 ORTHO05D005510 1.3e-23 115.9 303 30.7
CsaV3_5G015040 Cucumis sativus L. HOM05D005158 ORTHO05D005510 2.2e-23 115.2 358 27.9
FAN18G3280 Fragaria x ananassa HOM05D005158 ORTHO05D005510 2.2e-23 115.2 388 27.6
FAN18G4517 Fragaria x ananassa HOM05D005158 ORTHO05D005510 2.9e-23 114.8 376 26.3
AUR62014187 Chenopodium quinoa HOM05D005158 ORTHO05D005510 3.8e-23 114.4 321 28.3
Actinidia36249 Actinidia chinensis HOM05D005158 ORTHO05D005510 8.4e-23 113.2 325 26.8
MELO3C014995.2 Cucumis melo HOM05D005158 ORTHO05D005510 1.1e-22 112.8 327 28.1
Lj2g0016958 Lotus japonicus HOM05D005158 ORTHO05D005510 2.4e-22 111.7 317 28.4
PGR119G0382 Punica granatum HOM05D005158 ORTHO05D005510 2.4e-22 111.7 365 29.0
Sc14g0006290 Simmondsia chinensis HOM05D005158 ORTHO05D005510 2.4e-22 111.7 311 29.9
Sc14g0007050 Simmondsia chinensis HOM05D005158 ORTHO05D005510 2.4e-22 111.7 311 29.9
MD16G1026300 Malus domestica HOM05D005158 ORTHO05D005510 4.2e-22 110.9 346 26.9
CDE05G1850 Ceratophyllum demersum HOM05D005158 ORTHO05D005510 1.2e-21 109.4 337 28.2
SalBow8G5629 Salvia bowleyana HOM05D005158 ORTHO05D005510 1.6e-21 109.0 325 28.0
Duzib205G1388 Durio zibethinus HOM05D005158 ORTHO05D005510 2.7e-21 108.2 309 27.2
FAN04G1228 Fragaria x ananassa HOM05D005158 ORTHO05D005510 2.7e-21 108.2 355 28.5
QL03p033448 Quercus lobata HOM05D005158 ORTHO05D005510 2.7e-21 108.2 376 26.9
MSTRG.13599 Avicennia marina HOM05D005158 ORTHO05D005510 3.5e-21 107.8 318 28.3
Manes.17G078700 Manihot esculenta HOM05D005158 ORTHO05D005510 6.0e-21 107.1 322 26.7
SalBow8G1650 Salvia bowleyana HOM05D005158 ORTHO05D005510 6.0e-21 107.1 325 27.7
FvH4_5g17290 Fragaria vesca HOM05D005158 ORTHO05D005510 7.8e-21 106.7 345 28.7
Sopen05g014580 Solanum pennellii HOM05D005158 ORTHO05D005510 7.8e-21 106.7 327 27.2
Sed0000270 Sechium edule HOM05D005158 ORTHO05D005510 1.0e-20 106.3 311 28.6
FAN18G0401 Fragaria x ananassa HOM05D005158 ORTHO05D005510 1.3e-20 105.9 304 29.6
PSO478G5200 Papaver somniferum HOM05D005158 ORTHO05D005510 1.3e-20 105.9 393 25.2
Cfa008628 Carpinus fangiana HOM05D005158 ORTHO05D005510 1.7e-20 105.5 301 26.2
Phvul.003G032200 Phaseolus vulgaris HOM05D005158 ORTHO05D005510 2.3e-20 105.1 328 28.7
Hund20682 Selenicereus undatus HOM05D005158 ORTHO05D005510 2.3e-20 105.1 264 28.4
GSVIVG01011734001 Vitis vinifera HOM05D005158 ORTHO05D005510 2.3e-20 105.1 350 26.3
PSO017G1154 Papaver somniferum HOM05D005158 ORTHO05D005510 3.9e-20 104.4 392 25.5
Sabra15G0037900 Salix brachista HOM05D005158 ORTHO05D005510 3.9e-20 104.4 348 27.0
CiPaw.05G195800 Carya illinoinensis HOM05D005158 ORTHO05D005510 5.1e-20 104.0 310 27.7
CSS0029988 Camellia sinensis var. sinensis HOM05D005158 ORTHO05D005510 6.6e-20 103.6 324 25.9
RcHm_v2.0_Chr7g0178481 Rosa chinensis HOM05D005158 ORTHO05D005510 6.6e-20 103.6 345 27.5
Thecc.03G054800 Theobroma cacao HOM05D005158 ORTHO05D005510 8.7e-20 103.2 340 26.5
GSVIVG01008427001 Vitis vinifera HOM05D005158 ORTHO05D005510 8.7e-20 103.2 356 28.1
QL10p028515 Quercus lobata HOM05D005158 ORTHO05D005510 1.1e-19 102.8 309 27.2
COL.COLO4_37683 Corchorus olitorius HOM05D000282 ORTHO05D005510 1.5e-19 102.4 375 26.1
Haze_10977 Corylus avellana HOM05D005158 ORTHO05D005510 1.9e-19 102.1 304 26.6
ECA233G1067 Erigeron canadensis HOM05D005158 ORTHO05D005510 1.9e-19 102.1 300 28.7
HanXRQChr08g0212241 Helianthus annuus HOM05D005158 ORTHO05D005510 1.9e-19 102.1 393 25.4
MD06G1226600 Malus domestica HOM05D005158 ORTHO05D005510 1.9e-19 102.1 308 28.6
Potri.010G111100 Populus trichocarpa HOM05D005158 ORTHO05D005510 1.9e-19 102.1 327 27.8
Ciclev10015117m.g Citrus clementina HOM05D005158 ORTHO05D005510 2.5e-19 101.7 358 26.5
Sabra10G0081500 Salix brachista HOM05D005158 ORTHO05D005510 3.3e-19 101.3 339 28.6
Migut.L00352 Erythranthe guttata HOM05D005158 ORTHO05D005510 4.3e-19 100.9 389 24.9
Dinv28033 Davidia involucrata HOM05D005158 ORTHO05D005510 5.6e-19 100.5 307 27.7
TWI75G0580 Tripterygium wilfordii HOM05D005158 ORTHO05D005510 7.3e-19 100.1 286 28.7
Ciclev10008271m.g Citrus clementina HOM05D005158 ORTHO05D005510 9.6e-19 99.8 309 26.9
Nn4g24217 Nelumbo nucifera HOM05D005158 ORTHO05D005510 9.6e-19 99.8 418 26.6
SGA_v2.0_scaffold234G43623 Striga asiatica HOM05D005158 ORTHO05D005510 9.6e-19 99.8 330 27.3
CSS0001942 Camellia sinensis var. sinensis HOM05D005158 ORTHO05D005510 1.3e-18 99.4 367 26.2
CAN.G236.18 Capsicum annuum HOM05D005158 ORTHO05D005510 1.6e-18 99.0 306 26.8
Haze_18844 Corylus avellana HOM05D005158 ORTHO05D005510 2.1e-18 98.6 322 27.3
COL.COLO4_13149 Corchorus olitorius HOM05D005158 ORTHO05D005510 2.8e-18 98.2 325 25.2
Duzib251G0375 Durio zibethinus HOM05D005158 ORTHO05D005510 8.1e-18 96.7 392 26.0
Lsat_1_v5_gn_8_45001 Lactuca sativa HOM05D005158 ORTHO05D005510 8.1e-18 96.7 334 25.7
Prupe.1G327200 Prunus persica HOM05D005158 ORTHO05D005510 8.1e-18 96.7 372 25.8
Atru.chr9.1740 Acer truncatum HOM05D005158 ORTHO05D005510 5.3e-17 94.0 333 27.3
Carub.0002s1765 Capsella rubella HOM05D005158 ORTHO05D005510 5.3e-17 94.0 307 26.4
Eucgr.G02179 Eucalyptus grandis HOM05D005158 ORTHO05D005510 2.6e-16 91.7 326 25.8
CiPaw.15G143000 Carya illinoinensis HOM05D005158 ORTHO05D005510 4.5e-16 90.9 379 26.4
Lj6A744G51 Lonicera japonica HOM05D005158 ORTHO05D005510 5.4e-14 84.0 298 25.5
Zm00001eb054470 Zea mays HOM05D005158 ORTHO05D005510 9.3e-14 83.2 207 27.1
HPP92_016306 Vanilla planifolia HOM05D005158 ORTHO05D005510 2.1e-13 82.0 309 25.2
Rhsim09G0065900 Rhododendron simsii HOM05D005158 ORTHO05D005510 4.6e-13 80.9 255 27.1
Peaxi162Scf00159g01112 Petunia axillaris HOM05D005158 ORTHO05D005510 6.0e-13 80.5 253 28.1
SEGI_17459 Sequoiadendron giganteum HOM05D005158 ORTHO05D005510 1.8e-12 79.0 185 31.9
Prupe.5G232900 Prunus persica HOM05D005158 ORTHO05D005510 3.0e-12 78.2 181 28.7
Rhsim09G0065800 Rhododendron simsii HOM05D005158 ORTHO05D005510 5.1e-12 77.4 255 26.7
MCO04G437 Micromonas commoda HOM05D005158 ORTHO05D005510 8.7e-12 76.6 313 29.1
vmacro00408 Vaccinium macrocarpon HOM05D005158 ORTHO05D005510 1.1e-11 76.3 254 26.4
AUR62039517 Chenopodium quinoa HOM05D005158 ORTHO05D005510 2.8e-10 71.6 376 21.8
VMungo1215G0718 Vigna mungo HOM05D005158 ORTHO05D005510 1.2e-08 66.2 170 24.1
MCO07G148 Micromonas commoda HOM05D005158 ORTHO05D005510 2.6e-08 65.1 169 24.9
AUR62014186 Chenopodium quinoa HOM05D005158 ORTHO05D005510 3.4e-08 64.7 276 26.1
Thecc.02G284700 Theobroma cacao HOM05D005158 ORTHO05D005510 5.8e-08 63.9 192 24.5
Zm00001eb280420 Zea mays HOM05D005158 ORTHO05D005510 3.8e-07 61.2 195 27.7
HanXRQChr08g0212291 Helianthus annuus HOM05D005158 ORTHO05D005510 5.5e-06 57.4 104 29.8


User provided reference genes

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