Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c9_21390 Physcomitrium patens HOM05D005819 ORTHO05D006780 2.3e-131 472.2 244 100.0
SEGI_37806 Sequoiadendron giganteum HOM05D005819 ORTHO05D006780 9.5e-40 167.9 116 64.7
Mapoly0009s0241 Marchantia polymorpha HOM05D005819 ORTHO05D006780 1.2e-39 167.5 185 53.5
PGR142G2655 Punica granatum HOM05D005819 ORTHO05D006780 5.2e-38 162.2 113 61.9
THA.LOC104806805 Tarenaya hassleriana HOM05D005819 ORTHO05D006780 5.2e-38 162.2 130 57.7
Potri.013G150400 Populus trichocarpa HOM05D005819 ORTHO05D006780 6.8e-38 161.8 113 61.1
AL6G49690 Arabidopsis lyrata HOM05D005819 ORTHO05D006780 1.2e-37 161.0 143 53.1
SMO140G0069 Selaginella moellendorffii HOM05D005819 ORTHO05D006780 2.0e-37 160.2 109 69.7
arahy.Tifrunner.gnm1.ann1.7T7QMX Arachis hypogaea HOM05D005819 ORTHO05D006780 2.6e-37 159.8 123 58.5
Sp6g03280 Schrenkiella parvula HOM05D005819 ORTHO05D006780 2.6e-37 159.8 144 54.2
AT4G03240 Arabidopsis thaliana HOM05D005819 ORTHO05D006780 3.4e-37 159.5 143 53.1
Prupe.3G227000 Prunus persica HOM05D005819 ORTHO05D006780 7.5e-37 158.3 126 58.7
BcaC04g23988 Brassica carinata HOM05D005819 ORTHO05D006780 1.3e-36 157.5 128 56.2
A09p02550 Brassica napus HOM05D005819 ORTHO05D006780 1.3e-36 157.5 128 56.2
Ca_03448_v3 Cicer arietinum L. HOM05D005819 ORTHO05D006780 1.3e-36 157.5 123 57.7
BcaB01g02514 Brassica carinata HOM05D005819 ORTHO05D006780 1.7e-36 157.1 145 53.1
CSS0044572 Camellia sinensis var. sinensis HOM05D005819 ORTHO05D006780 1.7e-36 157.1 133 54.1
ClCG02G011330 Citrullus lanatus HOM05D005819 ORTHO05D006780 1.7e-36 157.1 123 56.9
Thhalv10028999m.g Eutrema salsugineum HOM05D005819 ORTHO05D006780 1.7e-36 157.1 144 52.8
PSO210G2402 Papaver somniferum HOM05D005819 ORTHO05D006780 1.7e-36 157.1 123 53.7
A03p30520 Brassica napus HOM05D005819 ORTHO05D006780 2.2e-36 156.8 128 57.0
C03p36930 Brassica napus HOM05D005819 ORTHO05D006780 2.2e-36 156.8 128 57.0
BraA03t12233Z Brassica rapa HOM05D005819 ORTHO05D006780 2.2e-36 156.8 128 57.0
BraA09t35901Z Brassica rapa HOM05D005819 ORTHO05D006780 2.2e-36 156.8 128 56.2
ECA246G1767 Erigeron canadensis HOM05D005819 ORTHO05D006780 2.2e-36 156.8 121 56.2
PSO170G6190 Papaver somniferum HOM05D005819 ORTHO05D006780 2.2e-36 156.8 123 54.5
Sabra13G0120900 Salix brachista HOM05D005819 ORTHO05D006780 2.2e-36 156.8 113 59.3
Aqoxy7G03432 Aquilegia oxysepala HOM05D005819 ORTHO05D006780 2.8e-36 156.4 113 60.2
BolC3t16000H Brassica oleracea HOM05D005819 ORTHO05D006780 2.8e-36 156.4 128 57.0
FAN05G1257 Fragaria x ananassa HOM05D005819 ORTHO05D006780 2.8e-36 156.4 123 56.1
Sed0001645 Sechium edule HOM05D005819 ORTHO05D006780 2.8e-36 156.4 123 58.5
CARHR251690 Cardamine hirsuta HOM05D005819 ORTHO05D006780 3.7e-36 156.0 127 57.5
MELO3C013522.2 Cucumis melo HOM05D005819 ORTHO05D006780 3.7e-36 156.0 123 57.7
Eucgr.K00886 Eucalyptus grandis HOM05D005819 ORTHO05D006780 3.7e-36 156.0 113 58.4
FvH4_6g44280 Fragaria vesca HOM05D005819 ORTHO05D006780 3.7e-36 156.0 123 56.1
FAN14G4258 Fragaria x ananassa HOM05D005819 ORTHO05D006780 3.7e-36 156.0 123 56.1
HanXRQChr17g0543121 Helianthus annuus HOM05D005819 ORTHO05D006780 3.7e-36 156.0 123 56.1
Os01g0783600 Oryza sativa ssp. japonica HOM05D005819 ORTHO05D006780 3.7e-36 156.0 121 57.0
SHI10263 Sapria himalayana HOM05D005819 ORTHO05D006780 3.7e-36 156.0 154 50.0
CiPaw.03G166600 Carya illinoinensis HOM05D005819 ORTHO05D006780 4.9e-36 155.6 147 48.3
Haze_13026 Corylus avellana HOM05D005819 ORTHO05D006780 4.9e-36 155.6 141 50.4
Glyma.03G007300 Glycine max HOM05D005819 ORTHO05D006780 4.9e-36 155.6 123 56.9
MD17G1087700 Malus domestica HOM05D005819 ORTHO05D006780 4.9e-36 155.6 113 60.2
Ciclev10016814m.g Citrus clementina HOM05D005819 ORTHO05D006780 6.3e-36 155.2 115 59.1
GSVIVG01000441001 Vitis vinifera HOM05D005819 ORTHO05D006780 6.3e-36 155.2 123 56.1
CsaV3_6G012280 Cucumis sativus L. HOM05D005819 ORTHO05D006780 8.3e-36 154.8 123 56.9
Lsat_1_v5_gn_3_41801 Lactuca sativa HOM05D005819 ORTHO05D006780 8.3e-36 154.8 126 54.0
Lj1g0005576 Lotus japonicus HOM05D005819 ORTHO05D006780 8.3e-36 154.8 143 53.1
Lalb_Chr22g0358491 Lupinus albus HOM05D005819 ORTHO05D006780 8.3e-36 154.8 123 56.1
Medtr7g087030 Medicago truncatula HOM05D005819 ORTHO05D006780 8.3e-36 154.8 113 61.1
Thecc.02G167000 Theobroma cacao HOM05D005819 ORTHO05D006780 8.3e-36 154.8 121 56.2
Atru.chr6.3097 Acer truncatum HOM05D005819 ORTHO05D006780 1.1e-35 154.5 115 57.4
BcaC01g06695 Brassica carinata HOM05D005819 ORTHO05D006780 1.1e-35 154.5 163 50.3
Carub.0006s3382 Capsella rubella HOM05D005819 ORTHO05D006780 1.1e-35 154.5 127 56.7
Glyma.19G118800 Glycine max HOM05D005819 ORTHO05D006780 1.1e-35 154.5 123 56.9
Cc05_g05680 Coffea canephora HOM05D005819 ORTHO05D006780 1.8e-35 153.7 143 48.3
Duzib248G0701 Durio zibethinus HOM05D005819 ORTHO05D006780 1.8e-35 153.7 113 60.2
Gohir.A03G161900 Gossypium hirsutum HOM05D005819 ORTHO05D006780 1.8e-35 153.7 123 55.3
Manes.18G113901 Manihot esculenta HOM05D005819 ORTHO05D006780 1.8e-35 153.7 127 55.1
FAN09G3032 Fragaria x ananassa HOM05D005819 ORTHO05D006780 2.4e-35 153.3 123 56.1
Gohir.D02G185101 Gossypium hirsutum HOM05D005819 ORTHO05D006780 2.4e-35 153.3 123 55.3
Gorai.005G207400 Gossypium raimondii HOM05D005819 ORTHO05D006780 3.1e-35 152.9 123 55.3
Medtr6g071520 Medicago truncatula HOM05D005819 ORTHO05D006780 3.1e-35 152.9 157 49.7
SalBow1G3361 Salvia bowleyana HOM05D005819 ORTHO05D006780 3.1e-35 152.9 144 50.7
SalBow1G8148 Salvia bowleyana HOM05D005819 ORTHO05D006780 3.1e-35 152.9 144 50.7
Zm00001eb151360 Zea mays HOM05D005819 ORTHO05D006780 3.1e-35 152.9 131 53.4
Ah.12g056190 Amaranthus hybridus HOM05D001579 ORTHO05D006780 4.1e-35 152.5 133 54.1
RcHm_v2.0_Chr2g0161141 Rosa chinensis HOM05D005819 ORTHO05D006780 4.1e-35 152.5 123 54.5
Solyc07g053150.3 Solanum lycopersicum HOM05D005819 ORTHO05D006780 5.4e-35 152.1 137 51.8
TPR.G7847 Trifolium pratense HOM05D005819 ORTHO05D006780 5.4e-35 152.1 121 56.2
Hund06769 Selenicereus undatus HOM05D005819 ORTHO05D006780 7.0e-35 151.8 113 56.6
PGSC0003DMG400026152 Solanum tuberosum HOM05D005819 ORTHO05D006780 7.0e-35 151.8 130 54.6
CANSAT21G1768 Cannabis sativa HOM05D005819 ORTHO05D006780 9.2e-35 151.4 123 52.8
Nn2g10488 Nelumbo nucifera HOM05D005819 ORTHO05D006780 9.2e-35 151.4 113 57.5
Hma1.2p1_1090F.1_g255750 Hydrangea macrophylla HOM05D005819 ORTHO05D006780 1.2e-34 151.0 130 53.8
Nitab4.5_0004360g0020 Nicotiana tabacum HOM05D005819 ORTHO05D006780 1.2e-34 151.0 130 54.6
MSTRG.14168 Avicennia marina HOM05D005819 ORTHO05D006780 1.6e-34 150.6 153 47.7
Sopen07g026700 Solanum pennellii HOM05D005819 ORTHO05D006780 1.6e-34 150.6 130 53.8
SGA_v2.0_scaffold159G37608 Striga asiatica HOM05D005819 ORTHO05D006780 1.6e-34 150.6 155 48.4
AUR62040308 Chenopodium quinoa HOM05D005819 ORTHO05D006780 2.0e-34 150.2 136 51.5
AUR62007448 Chenopodium quinoa HOM05D005819 ORTHO05D006780 2.7e-34 149.8 133 52.6
Peaxi162Scf00007g01734 Petunia axillaris HOM05D005819 ORTHO05D006780 2.7e-34 149.8 123 55.3
VMungo0647G1299 Vigna mungo HOM05D005819 ORTHO05D006780 2.7e-34 149.8 113 59.3
CSS0036944 Camellia sinensis var. sinensis HOM05D005819 ORTHO05D006780 3.5e-34 149.4 109 59.6
Sc12g0002590 Simmondsia chinensis HOM05D005819 ORTHO05D006780 3.5e-34 149.4 156 46.8
Migut.F00120 Erythranthe guttata HOM05D005819 ORTHO05D006780 5.9e-34 148.7 197 44.2
Phvul.001G107000 Phaseolus vulgaris HOM05D005819 ORTHO05D006780 5.9e-34 148.7 113 60.2
EL10Ac5g12980 Beta vulgaris HOM05D005819 ORTHO05D006780 1.0e-33 147.9 134 51.5
CAN.G640.15 Capsicum annuum HOM05D005819 ORTHO05D006780 1.0e-33 147.9 130 52.3
TWI18G0421 Tripterygium wilfordii HOM05D005819 ORTHO05D006780 1.0e-33 147.9 126 56.3
Nitab4.5_0006653g0030 Nicotiana tabacum HOM05D005819 ORTHO05D006780 1.7e-33 147.1 130 53.1
VMungo1383G0784 Vigna mungo HOM05D005819 ORTHO05D006780 1.7e-33 147.1 123 54.5
EL10Ac2g02755 Beta vulgaris HOM05D005819 ORTHO05D006780 1.1e-32 144.4 133 49.6
SalBow6G6406 Salvia bowleyana HOM05D005819 ORTHO05D006780 1.1e-32 144.4 144 49.3
SGA_v2.0_scaffold49G18319 Striga asiatica HOM05D005819 ORTHO05D006780 1.1e-32 144.4 210 40.0
TAR626G0084 Trochodendron aralioides HOM05D005819 ORTHO05D006780 1.1e-32 144.4 115 54.8
FAN02G1820 Fragaria x ananassa HOM05D005819 ORTHO05D006780 3.3e-32 142.9 144 47.2
CDE09G0293 Ceratophyllum demersum HOM05D007034 ORTHO05D006780 7.3e-32 141.7 109 59.6
CBR_g3856 Chara braunii HOM05D005819 ORTHO05D006780 7.3e-32 141.7 114 59.6
QL08p035991 Quercus lobata HOM05D005819 ORTHO05D006780 9.5e-32 141.4 162 43.8
Aa31LG5G2740 Aethionema arabicum HOM05D005819 ORTHO05D006780 1.2e-31 141.0 149 47.0
Oeu005644.2 Olea europaea HOM05D005819 ORTHO05D006780 1.2e-31 141.0 115 54.8
CDE02G1488 Ceratophyllum demersum HOM05D005819 ORTHO05D006780 2.1e-31 140.2 111 57.7
Zm00001eb034710 Zea mays HOM05D005819 ORTHO05D006780 2.8e-31 139.8 103 56.3
Rhsim04G0058700 Rhododendron simsii HOM05D005819 ORTHO05D006780 3.6e-31 139.4 108 55.6
Oeu037169.1 Olea europaea HOM05D005819 ORTHO05D006780 4.7e-31 139.0 115 53.9
AagrBONN_evm.TU.Sc2ySwM_117.2177 Anthoceros agrestis HOM05D005819 ORTHO05D006780 1.0e-30 137.9 131 51.1
DCAR_009705 Daucus carota HOM05D005819 ORTHO05D006780 1.5e-29 134.0 136 47.1
Medtr6g071700 Medicago truncatula HOM05D005819 ORTHO05D006780 3.4e-29 132.9 113 54.9
CiPaw.04G121300 Carya illinoinensis HOM05D005819 ORTHO05D006780 7.5e-29 131.7 123 50.4
unitig_749.g13948 Utricularia gibba HOM05D005819 ORTHO05D006780 7.5e-29 131.7 161 42.2
arahy.Tifrunner.gnm1.ann1.Q06U4P Arachis hypogaea HOM05D005819 ORTHO05D006780 1.7e-28 130.6 174 41.4
DCAR_021205 Daucus carota HOM05D005819 ORTHO05D006780 3.7e-28 129.4 88 61.4
Cre12.g538350 Chlamydomonas reinhardtii HOM05D005819 ORTHO05D006780 3.2e-27 126.3 138 48.6
MD09G1099400 Malus domestica HOM05D005819 ORTHO05D006780 1.6e-26 124.0 115 51.3
Sed0008711 Sechium edule HOM05D005819 ORTHO05D006780 1.7e-25 120.6 89 61.8
BcaB01g01964 Brassica carinata HOM05D005819 ORTHO05D006780 4.7e-23 112.5 92 53.3
PRCOL_00006727 Prasinoderma coloniale HOM05D005819 ORTHO05D006780 6.8e-22 108.6 88 54.5
MCO13G341 Micromonas commoda HOM05D005819 ORTHO05D006780 1.5e-21 107.5 128 43.0
Psat3g085640 Pisum sativum HOM05D005819 ORTHO05D006780 7.5e-21 105.1 87 56.3
TWI36G1190 Tripterygium wilfordii HOM05D005819 ORTHO05D006780 1.3e-20 104.4 82 59.8
Dinv13856 Davidia involucrata HOM05D005819 ORTHO05D006780 1.4e-19 100.9 87 54.0
RhsimUnG0197800 Rhododendron simsii HOM05D005819 ORTHO05D006780 1.4e-19 100.9 79 54.4
vmacro15799 Vaccinium macrocarpon HOM05D005819 ORTHO05D006780 4.1e-19 99.4 71 59.2
Oeu025479.1 Olea europaea HOM05D005819 ORTHO05D006780 3.5e-18 96.3 70 55.7
Dinv02570 Davidia involucrata HOM05D005819 ORTHO05D006780 4.6e-18 95.9 90 52.2
Cfa024975 Carpinus fangiana HOM05D005819 ORTHO05D006780 2.3e-14 83.6 111 42.3
HanXRQChr04g0112441 Helianthus annuus HOM05D005819 ORTHO05D006780 5.8e-13 79.0 73 50.7
HPP92_008010 Vanilla planifolia HOM05D005819 ORTHO05D006780 2.1e-10 70.5 117 36.8


User provided reference genes

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