Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c9_20800 Physcomitrium patens HOM05D006894 ORTHO05D008724 1.4e-248 862.4 429 100.0
Mapoly0039s0108 Marchantia polymorpha HOM05D006894 ORTHO05D008724 1.1e-123 447.6 387 57.4
AagrBONN_evm.TU.Sc2ySwM_344.1590 Anthoceros agrestis HOM05D006894 ORTHO05D007218 1.8e-118 430.3 333 63.4
SEGI_07604 Sequoiadendron giganteum HOM05D006894 ORTHO05D008724 9.9e-117 424.5 357 57.7
GSVIVG01022874001 Vitis vinifera HOM05D006894 ORTHO05D008724 1.1e-112 411.0 367 55.0
SMO119G0367 Selaginella moellendorffii HOM05D006894 ORTHO05D008724 6.2e-111 405.2 339 59.3
MD08G1235500 Malus domestica HOM05D006894 ORTHO05D008724 1.4e-110 404.1 358 54.5
Sopen01g046470 Solanum pennellii HOM05D006894 ORTHO05D008724 5.2e-110 402.1 360 55.3
ATR0665G083 Amborella trichopoda HOM05D006894 ORTHO05D008724 1.2e-109 401.0 371 53.9
Cfa005507 Carpinus fangiana HOM05D006894 ORTHO05D008724 1.5e-109 400.6 358 53.9
Aqoxy6G00238 Aquilegia oxysepala HOM05D006894 ORTHO05D008724 2.6e-109 399.8 357 55.7
TAR628G1558 Trochodendron aralioides HOM05D006894 ORTHO05D008724 2.6e-109 399.8 356 53.9
Prupe.1G571400 Prunus persica HOM05D006894 ORTHO05D008724 5.8e-109 398.7 352 54.5
CDE08G1218 Ceratophyllum demersum HOM05D006894 ORTHO05D008724 1.7e-108 397.1 382 51.3
Solyc01g104060.3 Solanum lycopersicum HOM05D006894 ORTHO05D008724 1.7e-108 397.1 360 54.7
Thecc.02G114400 Theobroma cacao HOM05D006894 ORTHO05D008724 3.8e-108 396.0 358 52.8
Nn1g08851 Nelumbo nucifera HOM05D006894 ORTHO05D008724 6.4e-108 395.2 356 53.7
Sp2g03530 Schrenkiella parvula HOM05D006894 ORTHO05D008724 6.4e-108 395.2 382 51.3
CANSAT11G1074 Cannabis sativa HOM05D006894 ORTHO05D008724 8.4e-108 394.8 374 51.3
A01p29780 Brassica napus HOM05D006894 ORTHO05D008724 1.4e-107 394.0 384 51.6
arahy.Tifrunner.gnm1.ann1.7VS6FJ Arachis hypogaea HOM05D006894 ORTHO05D008724 1.9e-107 393.7 358 53.6
CAN.G798.8 Capsicum annuum HOM05D006894 ORTHO05D008724 1.9e-107 393.7 360 53.1
arahy.Tifrunner.gnm1.ann1.NZQI89 Arachis hypogaea HOM05D006894 ORTHO05D008724 2.4e-107 393.3 358 53.9
Ciclev10001270m.g Citrus clementina HOM05D006894 ORTHO05D008724 4.2e-107 392.5 359 53.8
BcaC09g49347 Brassica carinata HOM05D006894 ORTHO05D008724 5.4e-107 392.1 384 51.6
Eucgr.G00568 Eucalyptus grandis HOM05D006894 ORTHO05D008724 5.4e-107 392.1 357 53.8
QL02p099211 Quercus lobata HOM05D006894 ORTHO05D008724 5.4e-107 392.1 397 50.4
C01p37610 Brassica napus HOM05D006894 ORTHO05D008724 9.2e-107 391.3 359 53.8
Thhalv10023478m.g Eutrema salsugineum HOM05D006894 ORTHO05D008724 9.2e-107 391.3 387 51.2
Carub.0002s0422 Capsella rubella HOM05D006894 ORTHO05D008724 1.6e-106 390.6 359 53.2
Atru.chr6.614 Acer truncatum HOM05D006894 ORTHO05D008724 2.1e-106 390.2 358 52.8
TPR.G23092 Trifolium pratense HOM05D006894 ORTHO05D008724 2.1e-106 390.2 358 53.6
CiPaw.05G048800 Carya illinoinensis HOM05D006894 ORTHO05D008724 4.6e-106 389.0 419 48.0
AL2G15470 Arabidopsis lyrata HOM05D006894 ORTHO05D008724 6.0e-106 388.7 359 52.9
Gohir.D02G214600 Gossypium hirsutum HOM05D006894 ORTHO05D008724 6.0e-106 388.7 377 50.7
Gorai.005G242400 Gossypium raimondii HOM05D006894 ORTHO05D008724 6.0e-106 388.7 377 50.7
CsaV3_6G037480 Cucumis sativus L. HOM05D006894 ORTHO05D008724 7.8e-106 388.3 358 52.2
Duzib248G0689 Durio zibethinus HOM05D006894 ORTHO05D008724 7.8e-106 388.3 375 50.7
Glyma.05G168900 Glycine max HOM05D006894 ORTHO05D008724 7.8e-106 388.3 358 51.1
Gohir.A03G193500 Gossypium hirsutum HOM05D006894 ORTHO05D008724 7.8e-106 388.3 377 50.4
PSO170G1552 Papaver somniferum HOM05D006894 ORTHO05D008724 7.8e-106 388.3 358 52.5
RcHm_v2.0_Chr7g0221781 Rosa chinensis HOM05D006894 ORTHO05D008724 7.8e-106 388.3 359 53.8
CARHR052050 Cardamine hirsuta HOM05D006894 ORTHO05D008724 1.3e-105 387.5 359 52.4
FAN08G3638 Fragaria x ananassa HOM05D006894 ORTHO05D008724 1.3e-105 387.5 360 54.2
PSO528G0189 Papaver somniferum HOM05D006894 ORTHO05D008724 1.3e-105 387.5 358 52.8
Atru.chr6.599 Acer truncatum HOM05D006894 ORTHO05D008724 3.0e-105 386.3 358 52.2
Ca_17824_v3 Cicer arietinum L. HOM05D006894 ORTHO05D008724 5.1e-105 385.6 358 53.6
Sc15g0002580 Simmondsia chinensis HOM05D006894 ORTHO05D008724 5.1e-105 385.6 358 52.5
VMungo0251G0921 Vigna mungo HOM05D006894 ORTHO05D008724 5.1e-105 385.6 358 52.2
Nitab4.5_0000816g0080 Nicotiana tabacum HOM05D006894 ORTHO05D008724 6.6e-105 385.2 360 51.4
AT1G60990 Arabidopsis thaliana HOM05D006894 ORTHO05D008724 8.7e-105 384.8 359 52.4
Lalb_Chr12g0204471 Lupinus albus HOM05D006894 ORTHO05D008724 8.7e-105 384.8 403 48.9
Manes.07G017700 Manihot esculenta HOM05D006894 ORTHO05D008724 8.7e-105 384.8 358 52.8
Phvul.002G249600 Phaseolus vulgaris HOM05D006894 ORTHO05D008724 1.9e-104 383.6 358 50.6
CBR_g30837 Chara braunii HOM05D000019 ORTHO05D000048 2.5e-104 383.3 349 54.7
TWI14G1412 Tripterygium wilfordii HOM05D006894 ORTHO05D008724 2.5e-104 383.3 380 49.2
COL.COLO4_11781 Corchorus olitorius HOM05D006894 ORTHO05D008724 3.3e-104 382.9 380 50.5
Lsat_1_v5_gn_9_118621 Lactuca sativa HOM05D006894 ORTHO05D008724 4.3e-104 382.5 357 52.9
Medtr8g088790 Medicago truncatula HOM05D006894 ORTHO05D008724 1.6e-103 380.6 357 52.4
Nitab4.5_0010336g0030 Nicotiana tabacum HOM05D006894 ORTHO05D008724 2.8e-103 379.8 352 52.3
THA.LOC104809620 Tarenaya hassleriana HOM05D006894 ORTHO05D008724 3.6e-103 379.4 380 50.5
Psat7g062040 Pisum sativum HOM05D006894 ORTHO05D008724 8.1e-103 378.3 357 52.4
HanXRQChr09g0249011 Helianthus annuus HOM05D006894 ORTHO05D008724 1.1e-102 377.9 357 52.4
Aa31LG2G9600 Aethionema arabicum HOM05D006894 ORTHO05D008724 1.4e-102 377.5 398 48.7
Migut.B00823 Erythranthe guttata HOM05D006894 ORTHO05D008724 4.0e-102 375.9 360 52.2
Peaxi162Scf00017g02640 Petunia axillaris HOM05D006894 ORTHO05D008724 2.6e-101 373.2 344 52.9
Lj4g0002387 Lotus japonicus HOM05D006894 ORTHO05D008724 5.8e-101 372.1 343 54.8
ECA240G3758 Erigeron canadensis HOM05D006894 ORTHO05D008724 7.6e-101 371.7 357 52.1
Sed0001229 Sechium edule HOM05D006894 ORTHO05D008724 9.9e-101 371.3 341 51.0
PGSC0003DMG400023767 Solanum tuberosum HOM05D006894 ORTHO05D008724 4.9e-100 369.0 380 50.8
Lj9A304G82 Lonicera japonica HOM05D006894 ORTHO05D008724 1.1e-99 367.9 357 51.0
Oeu027798.1 Olea europaea HOM05D006894 ORTHO05D008724 6.6e-97 358.6 360 50.0
Cc02_g22630 Coffea canephora HOM05D006894 ORTHO05D008724 8.7e-97 358.2 353 51.0
MSTRG.20303 Avicennia marina HOM05D006894 ORTHO05D008724 1.1e-96 357.8 359 50.4
Peaxi162Scf00011g00531 Petunia axillaris HOM05D006894 ORTHO05D008724 1.9e-96 357.1 376 48.4
PGR042G0448 Punica granatum HOM05D006894 ORTHO05D008724 2.5e-96 356.7 423 43.5
DCAR_006702 Daucus carota HOM05D006894 ORTHO05D008724 1.3e-95 354.4 377 48.0
vmacro01754 Vaccinium macrocarpon HOM05D006894 ORTHO05D008724 1.2e-93 347.8 401 45.9
FAN18G4164 Fragaria x ananassa HOM05D006894 ORTHO05D008724 4.5e-93 345.9 397 47.1
MBI06_g01072_MAGBIO Magnolia biondii HOM05D006894 ORTHO05D008724 5.8e-93 345.5 463 41.7
BcaB04g20304 Brassica carinata HOM05D006894 ORTHO05D008724 1.4e-91 340.9 359 49.3
FvH4_5g29120 Fragaria vesca HOM05D006894 ORTHO05D008724 2.1e-90 337.0 360 48.6
Rhsim11G0128300 Rhododendron simsii HOM05D006894 ORTHO05D008724 5.1e-89 332.4 389 46.8
FAN04G0479 Fragaria x ananassa HOM05D006894 ORTHO05D008724 1.5e-88 330.9 360 48.6
Actinidia39033 Actinidia chinensis HOM05D006894 ORTHO05D008724 3.3e-88 329.7 343 49.0
Dinv19376 Davidia involucrata HOM05D006894 ORTHO05D008724 8.4e-84 315.1 275 53.5
Actinidia30531 Actinidia chinensis HOM05D006894 ORTHO05D008724 1.8e-81 307.4 342 46.8
SEGI_10844 Sequoiadendron giganteum HOM05D006894 ORTHO05D008724 1.6e-74 284.3 306 49.3
BraA01t03106Z Brassica rapa HOM05D006894 ORTHO05D008724 4.8e-71 272.7 257 52.1
BolC1t03726H Brassica oleracea HOM05D006894 ORTHO05D008724 1.1e-70 271.6 232 55.6
MELO3C014368.2 Cucumis melo HOM05D006894 ORTHO05D008724 1.8e-70 270.8 362 42.0
Haze_01731 Corylus avellana HOM05D006894 ORTHO05D008724 3.1e-70 270.0 433 37.4
unitig_749.g14128 Utricularia gibba HOM05D006894 ORTHO05D008724 4.1e-70 269.6 294 45.9
Cre12.g552850 Chlamydomonas reinhardtii HOM05D006894 ORTHO05D008724 7.7e-69 265.4 369 41.7
FAN13G2283 Fragaria x ananassa HOM05D006894 ORTHO05D008724 2.5e-59 233.8 361 39.1
CSS0024184 Camellia sinensis var. sinensis HOM05D006894 ORTHO05D008724 8.8e-57 225.3 358 36.9
Pp3c5_7230 Physcomitrium patens HOM05D006894 ORTHO05D008724 5.7e-48 196.1 185 62.7
Rhsim09G0048600 Rhododendron simsii HOM05D006894 ORTHO05D008724 5.0e-36 156.4 169 48.5
Cpa.g.sc30.18 Carica papaya HOM05D006894 ORTHO05D008724 4.5e-29 133.3 128 53.9
BcaB05g23073 Brassica carinata HOM05D006894 ORTHO05D008724 4.7e-26 123.2 110 55.5
Rhsim09G0016000 Rhododendron simsii HOM05D006894 ORTHO05D008724 4.7e-26 123.2 180 37.8
BcaB01g03502 Brassica carinata HOM05D006894 ORTHO05D008724 1.0e-25 122.1 139 48.9
ClCG09G014030 Citrullus lanatus HOM05D006894 ORTHO05D008724 2.3e-25 120.9 125 48.8
PRCOL_00004673 Prasinoderma coloniale HOM05D006894 ORTHO05D008724 9.2e-22 109.0 371 26.7
BcaB02g10691 Brassica carinata HOM05D000189 ORTHO05D000474 2.3e-17 94.4 222 32.0
Duzib052G1224 Durio zibethinus HOM05D006894 ORTHO05D008724 4.0e-17 93.6 133 41.4
Cpa.g.sc30.19 Carica papaya HOM05D006894 ORTHO05D008724 3.4e-16 90.5 111 41.4
ClCG09G014040 Citrullus lanatus HOM05D006894 ORTHO05D008724 4.9e-15 86.7 79 44.3
Solyc09g015460.3 Solanum lycopersicum HOM05D006894 ORTHO05D008724 3.5e-13 80.5 60 58.3
Glyma.08G127500 Glycine max HOM05D006894 ORTHO05D008724 5.2e-09 66.6 99 35.4
ClCG09G014050 Citrullus lanatus HOM05D006894 ORTHO05D008724 2.6e-08 64.3 55 56.4
Peaxi162Scf01350g00016 Petunia axillaris HOM05D006894 ORTHO05D008724 2.9e-07 60.8 47 55.3


User provided reference genes

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