Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c9_19250 Physcomitrium patens HOM05D007307 ORTHO05D009190 1.7e-263 912.1 474 100.0
Pp3c15_23280 Physcomitrium patens HOM05D007307 ORTHO05D009190 3.8e-226 788.1 474 85.2
AagrBONN_evm.TU.Sc2ySwM_344.2748 Anthoceros agrestis HOM05D007307 ORTHO05D009190 1.1e-124 451.1 406 57.6
Nn2g12391 Nelumbo nucifera HOM05D007307 ORTHO05D009190 1.3e-122 444.1 421 55.3
TAR625G0746 Trochodendron aralioides HOM05D007307 ORTHO05D009190 4.7e-120 435.6 457 51.6
PSO017G5597 Papaver somniferum HOM05D007307 ORTHO05D009190 2.3e-119 433.3 408 54.4
TWI18G0485 Tripterygium wilfordii HOM05D007307 ORTHO05D009190 2.3e-119 433.3 425 52.9
ClCG09G003340 Citrullus lanatus HOM05D007307 ORTHO05D009190 3.1e-119 433.0 410 53.9
MELO3C023468.2 Cucumis melo HOM05D007307 ORTHO05D009190 5.2e-119 432.2 410 53.4
PSO170G4955 Papaver somniferum HOM05D007307 ORTHO05D009190 6.8e-119 431.8 408 54.2
CAN.G407.66 Capsicum annuum HOM05D007307 ORTHO05D009190 8.9e-119 431.4 412 52.2
SalBow7G3293 Salvia bowleyana HOM05D007307 ORTHO05D009190 8.9e-119 431.4 422 53.8
CsaV3_7G031890 Cucumis sativus L. HOM05D007307 ORTHO05D009190 1.5e-118 430.6 410 53.7
Nitab4.5_0012161g0020 Nicotiana tabacum HOM05D007307 ORTHO05D009190 1.5e-118 430.6 412 52.2
Peaxi162Scf00332g00525 Petunia axillaris HOM05D007307 ORTHO05D009190 2.0e-118 430.3 407 51.8
Cc04_g05100 Coffea canephora HOM05D007307 ORTHO05D009190 2.6e-118 429.9 413 51.8
MSTRG.11181 Avicennia marina HOM05D007307 ORTHO05D009190 3.4e-118 429.5 420 53.6
ATR0739G128 Amborella trichopoda HOM05D007307 ORTHO05D009190 5.8e-118 428.7 453 51.2
PGSC0003DMG400019823 Solanum tuberosum HOM05D007307 ORTHO05D009190 5.8e-118 428.7 406 52.7
CiPaw.02G162300 Carya illinoinensis HOM05D007307 ORTHO05D009190 7.5e-118 428.3 407 55.3
Nitab4.5_0002568g0020 Nicotiana tabacum HOM05D007307 ORTHO05D009190 7.5e-118 428.3 406 52.2
Lj5A80T58 Lonicera japonica HOM05D007307 ORTHO05D009190 1.7e-117 427.2 406 53.4
Solyc03g116870.3 Solanum lycopersicum HOM05D007307 ORTHO05D009190 2.2e-117 426.8 406 52.5
Sopen03g035800 Solanum pennellii HOM05D007307 ORTHO05D009190 2.2e-117 426.8 406 52.5
QL05p036096 Quercus lobata HOM05D007307 ORTHO05D009190 2.9e-117 426.4 438 50.9
Zm00001eb176730 Zea mays HOM05D007307 ORTHO05D009190 2.9e-117 426.4 423 52.7
AUR62026998 Chenopodium quinoa HOM05D007307 ORTHO05D009190 6.4e-117 425.2 420 52.4
Gorai.009G123800 Gossypium raimondii HOM05D007307 ORTHO05D009190 6.4e-117 425.2 410 52.7
MD17G1223300 Malus domestica HOM05D007307 ORTHO05D009190 1.1e-116 424.5 406 53.2
VMungo0331G1235 Vigna mungo HOM05D007307 ORTHO05D009190 1.1e-116 424.5 411 53.5
Gohir.D05G120300 Gossypium hirsutum HOM05D007307 ORTHO05D009190 3.2e-116 422.9 410 52.4
GSVIVG01015957001 Vitis vinifera HOM05D007307 ORTHO05D009190 3.2e-116 422.9 406 52.5
Glyma.07G023000 Glycine max HOM05D007307 ORTHO05D009190 4.1e-116 422.5 447 50.1
Ca_20542_v3 Cicer arietinum L. HOM05D007307 ORTHO05D009190 5.4e-116 422.2 424 52.6
Os08g0276100 Oryza sativa ssp. japonica HOM05D007307 ORTHO05D009190 9.2e-116 421.4 422 52.4
SMO364G0491 Selaginella moellendorffii HOM05D007307 ORTHO05D009190 9.2e-116 421.4 398 53.5
Prupe.3G098200 Prunus persica HOM05D007307 ORTHO05D009190 1.2e-115 421.0 406 53.0
CSS0015248 Camellia sinensis var. sinensis HOM05D007307 ORTHO05D009190 1.6e-115 420.6 446 51.1
THA.LOC104813590 Tarenaya hassleriana HOM05D007307 ORTHO05D009190 1.6e-115 420.6 405 53.6
Phvul.010G161300 Phaseolus vulgaris HOM05D007307 ORTHO05D009190 2.1e-115 420.2 411 53.3
Glyma.08G218800 Glycine max HOM05D007307 ORTHO05D009190 4.6e-115 419.1 421 51.5
RcHm_v2.0_Chr2g0132981 Rosa chinensis HOM05D007307 ORTHO05D009190 4.6e-115 419.1 405 52.3
Aqoxy7G01916 Aquilegia oxysepala HOM05D007307 ORTHO05D009190 6.0e-115 418.7 443 50.6
Sed0012177 Sechium edule HOM05D007307 ORTHO05D009190 7.8e-115 418.3 411 51.8
Thecc.06G041700 Theobroma cacao HOM05D007307 ORTHO05D009190 7.8e-115 418.3 410 52.7
AUR62030838 Chenopodium quinoa HOM05D007307 ORTHO05D009190 1.0e-114 417.9 450 50.2
Migut.I00693 Erythranthe guttata HOM05D007307 ORTHO05D009190 1.3e-114 417.5 450 50.7
Lj3g0010338 Lotus japonicus HOM05D007307 ORTHO05D009190 1.7e-114 417.2 422 51.4
Medtr4g007080 Medicago truncatula HOM05D007307 ORTHO05D009190 2.3e-114 416.8 408 51.7
Aa31LG7G560 Aethionema arabicum HOM05D007307 ORTHO05D009190 3.0e-114 416.4 434 50.2
CDE04G0143 Ceratophyllum demersum HOM05D007307 ORTHO05D009190 3.0e-114 416.4 451 49.9
FAN14G3907 Fragaria x ananassa HOM05D007307 ORTHO05D009190 3.0e-114 416.4 405 51.6
Cpa.g.sc10.77 Carica papaya HOM05D007307 ORTHO05D009190 5.1e-114 415.6 411 51.8
FvH4_6g28640 Fragaria vesca HOM05D007307 ORTHO05D009190 6.6e-114 415.2 405 51.6
EL10Ac3g06300 Beta vulgaris HOM05D007307 ORTHO05D009190 1.1e-113 414.5 411 52.3
ECA246G2038 Erigeron canadensis HOM05D007307 ORTHO05D009190 1.1e-113 414.5 416 51.9
Haze_16668 Corylus avellana HOM05D007307 ORTHO05D009190 1.5e-113 414.1 420 51.9
Manes.04G102400 Manihot esculenta HOM05D007307 ORTHO05D009190 1.5e-113 414.1 457 48.6
Oeu051583.2 Olea europaea HOM05D007307 ORTHO05D009190 1.5e-113 414.1 391 53.7
Eucgr.F03957 Eucalyptus grandis HOM05D007307 ORTHO05D009190 1.9e-113 413.7 404 53.0
FAN05G4298 Fragaria x ananassa HOM05D007307 ORTHO05D009190 1.9e-113 413.7 405 51.4
Rhsim08G0205700 Rhododendron simsii HOM05D007307 ORTHO05D009190 1.9e-113 413.7 425 50.8
A06p12000 Brassica napus HOM05D007307 ORTHO05D009190 2.5e-113 413.3 411 52.8
BraA06t24371Z Brassica rapa HOM05D007307 ORTHO05D009190 2.5e-113 413.3 411 52.8
Lsat_1_v5_gn_5_8240 Lactuca sativa HOM05D007307 ORTHO05D009190 2.5e-113 413.3 445 49.7
FAN09G0915 Fragaria x ananassa HOM05D007307 ORTHO05D009190 4.3e-113 412.5 405 51.4
Lalb_Chr25g0278871 Lupinus albus HOM05D007307 ORTHO05D009190 5.6e-113 412.1 422 52.8
Thhalv10007586m.g Eutrema salsugineum HOM05D007307 ORTHO05D009190 1.2e-112 411.0 432 50.2
BcaB02g06649 Brassica carinata HOM05D007307 ORTHO05D009190 1.6e-112 410.6 405 52.6
BcaC05g25617 Brassica carinata HOM05D007307 ORTHO05D009190 1.6e-112 410.6 411 52.3
Duzib192G1050 Durio zibethinus HOM05D007307 ORTHO05D009190 1.6e-112 410.6 448 50.0
Atru.chr10.2412 Acer truncatum HOM05D007307 ORTHO05D009190 2.8e-112 409.8 449 49.2
Ciclev10025544m.g Citrus clementina HOM05D007307 ORTHO05D009190 2.8e-112 409.8 417 52.0
TPR.G23084 Trifolium pratense HOM05D007307 ORTHO05D009190 2.8e-112 409.8 413 51.1
HanXRQChr08g0235871 Helianthus annuus HOM05D007307 ORTHO05D009190 4.7e-112 409.1 449 49.9
Zm00001eb412420 Zea mays HOM05D007307 ORTHO05D009190 6.2e-112 408.7 415 51.6
AL1G28140 Arabidopsis lyrata HOM05D007307 ORTHO05D009190 1.1e-111 407.9 416 51.9
C05p14190 Brassica napus HOM05D007307 ORTHO05D009190 1.4e-111 407.5 411 52.1
Psat7g260240 Pisum sativum HOM05D007307 ORTHO05D009190 3.1e-111 406.4 452 48.7
Carub.0001s1578 Capsella rubella HOM05D007307 ORTHO05D009190 5.2e-111 405.6 435 50.1
AT1G15980 Arabidopsis thaliana HOM05D007307 ORTHO05D009190 8.9e-111 404.8 434 50.5
Sp1g14290 Schrenkiella parvula HOM05D007307 ORTHO05D009190 8.9e-111 404.8 432 49.5
Actinidia25480 Actinidia chinensis HOM05D007307 ORTHO05D009190 2.0e-110 403.7 406 51.2
unitig_52.g17476 Utricularia gibba HOM05D007307 ORTHO05D009190 2.0e-110 403.7 410 52.0
CARHR016480 Cardamine hirsuta HOM05D007307 ORTHO05D009190 4.4e-110 402.5 445 48.5
FAN02G3759 Fragaria x ananassa HOM05D007307 ORTHO05D009190 2.9e-109 399.8 394 51.0
CANSAT56G3714 Cannabis sativa HOM05D007307 ORTHO05D009190 8.4e-109 398.3 434 49.5
Mapoly0114s0017 Marchantia polymorpha HOM05D007307 ORTHO05D009190 9.2e-108 394.8 444 47.5
Potri.001G044300 Populus trichocarpa HOM05D007307 ORTHO05D009190 1.2e-107 394.4 435 51.3
DCAR_017649 Daucus carota HOM05D007307 ORTHO05D009190 4.7e-104 382.5 361 53.5
arahy.Tifrunner.gnm1.ann1.X6E8D2 Arachis hypogaea HOM05D007307 ORTHO05D009190 4.4e-102 375.9 445 46.7
Hma1.2p1_0109F.1_g052560 Hydrangea macrophylla HOM05D007307 ORTHO05D009190 1.4e-100 370.9 452 45.6
Sabra01G0030600 Salix brachista HOM05D007307 ORTHO05D009190 1.6e-99 367.5 448 47.8
CBR_g34729 Chara braunii HOM05D007307 ORTHO05D009190 3.9e-98 362.8 418 46.4
Dinv23284 Davidia involucrata HOM05D007307 ORTHO05D009190 6.2e-96 355.5 339 52.5
Gohir.A05G119300 Gossypium hirsutum HOM05D007307 ORTHO05D009190 4.2e-92 342.8 342 50.6
COL.COLO4_26702 Corchorus olitorius HOM05D007307 ORTHO05D009190 8.4e-85 318.5 313 52.1
BolC5t30150H Brassica oleracea HOM05D007307 ORTHO05D009190 3.9e-82 309.7 299 51.8
arahy.Tifrunner.gnm1.ann1.DFM3I4 Arachis hypogaea HOM05D007307 ORTHO05D009190 3.3e-81 306.6 445 42.7
Ah.01g006960 Amaranthus hybridus HOM05D007307 ORTHO05D009190 1.1e-76 291.6 451 40.8
SEGI_02712 Sequoiadendron giganteum HOM05D007307 ORTHO05D009190 1.3e-53 214.9 208 52.4
SEGI_37660 Sequoiadendron giganteum HOM05D007307 ORTHO05D009190 1.3e-53 214.9 208 52.4
SEGI_25940 Sequoiadendron giganteum HOM05D007307 ORTHO05D009190 7.7e-46 189.1 219 50.2
Hma1.2p1_0109F.1_g052570 Hydrangea macrophylla HOM05D007307 ORTHO05D009190 1.8e-39 167.9 195 47.2
Hund06518 Selenicereus undatus HOM05D007307 ORTHO05D009190 5.5e-36 156.4 187 43.3
Actinidia18248 Actinidia chinensis HOM05D007307 ORTHO05D009190 1.9e-15 88.2 118 43.2


User provided reference genes

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