Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c9_17440 Physcomitrium patens HOM05D006345 ORTHO05D007428 3.3e-164 581.6 289 100.0
Mapoly0069s0066 Marchantia polymorpha HOM05D006345 ORTHO05D007428 8.7e-101 370.9 249 74.3
CBR_g45447 Chara braunii HOM05D006345 ORTHO05D007428 5.9e-89 331.6 295 59.7
AagrBONN_evm.TU.Sc2ySwM_117.4015 Anthoceros agrestis HOM05D006345 ORTHO05D007428 7.7e-89 331.3 290 60.3
SMO358G0200 Selaginella moellendorffii HOM05D006345 ORTHO05D007428 1.7e-88 330.1 263 62.7
MBI16_g30839_MAGBIO Magnolia biondii HOM05D006345 ORTHO05D007428 1.4e-85 320.5 276 60.5
Ca_19950_v3 Cicer arietinum L. HOM05D006345 ORTHO05D007428 1.1e-84 317.4 245 63.3
TAR624G0710 Trochodendron aralioides HOM05D006345 ORTHO05D007428 3.3e-84 315.8 246 62.2
Lalb_Chr07g0189941 Lupinus albus HOM05D006345 ORTHO05D007428 9.7e-84 314.3 245 62.4
Lj3g0013440 Lotus japonicus HOM05D006345 ORTHO05D007428 1.1e-82 310.8 243 62.6
Sc05g0003040 Simmondsia chinensis HOM05D006345 ORTHO05D007428 1.1e-82 310.8 245 60.4
VMungo1383G2204 Vigna mungo HOM05D006345 ORTHO05D007428 2.4e-82 309.7 246 61.4
ClCG02G007550 Citrullus lanatus HOM05D006345 ORTHO05D007428 6.9e-82 308.1 273 60.1
Phvul.003G037201 Phaseolus vulgaris HOM05D006345 ORTHO05D007428 6.9e-82 308.1 245 61.6
THA.LOC104822694 Tarenaya hassleriana HOM05D006345 ORTHO05D007428 6.9e-82 308.1 248 60.5
Cpa.g.sc12.137 Carica papaya HOM05D006345 ORTHO05D007428 9.1e-82 307.8 248 62.1
COL.COLO4_13882 Corchorus olitorius HOM05D006345 ORTHO05D007428 1.5e-81 307.0 248 60.5
MELO3C018575.2 Cucumis melo HOM05D006345 ORTHO05D007428 1.5e-81 307.0 247 64.0
Duzib212G0272 Durio zibethinus HOM05D006345 ORTHO05D007428 2.0e-81 306.6 247 60.3
CsaV3_7G007230 Cucumis sativus L. HOM05D006345 ORTHO05D007428 2.6e-81 306.2 247 63.6
Lalb_Chr13g0291791 Lupinus albus HOM05D006345 ORTHO05D007428 2.6e-81 306.2 245 61.2
Sabra01G0052000 Salix brachista HOM05D006345 ORTHO05D007428 2.6e-81 306.2 247 59.5
Nn3g17198 Nelumbo nucifera HOM05D006345 ORTHO05D007428 3.4e-81 305.8 281 56.2
Glyma.03G027700 Glycine max HOM05D006345 ORTHO05D007428 4.5e-81 305.4 245 60.8
Dinv19690 Davidia involucrata HOM05D006345 ORTHO05D007428 7.7e-81 304.7 250 60.8
Psat7g230920 Pisum sativum HOM05D006345 ORTHO05D007428 7.7e-81 304.7 245 58.8
Medtr4g024860 Medicago truncatula HOM05D000001 ORTHO05D000003 1.3e-80 303.9 245 60.4
arahy.Tifrunner.gnm1.ann1.G9BQRV Arachis hypogaea HOM05D006345 ORTHO05D007428 1.7e-80 303.5 245 61.2
Aqoxy7G02153 Aquilegia oxysepala HOM05D006345 ORTHO05D007428 2.9e-80 302.8 295 53.6
CSS0008102 Camellia sinensis var. sinensis HOM05D006345 ORTHO05D007428 2.9e-80 302.8 249 60.2
PGR042G3945 Punica granatum HOM05D006345 ORTHO05D007428 2.9e-80 302.8 245 58.4
CARHR088090 Cardamine hirsuta HOM05D006345 ORTHO05D007428 5.0e-80 302.0 211 66.8
Glyma.01G139633 Glycine max HOM05D006345 ORTHO05D007428 5.0e-80 302.0 245 59.6
Sed0017834 Sechium edule HOM05D006345 ORTHO05D007428 6.5e-80 301.6 246 61.0
CiPaw.01G263700 Carya illinoinensis HOM05D006345 ORTHO05D007428 1.1e-79 300.8 248 60.5
Prupe.4G121300 Prunus persica HOM05D006345 ORTHO05D007428 1.1e-79 300.8 237 60.8
Ciclev10016345m.g Citrus clementina HOM05D006345 ORTHO05D007428 1.4e-79 300.4 246 59.8
Aa31LG8G650 Aethionema arabicum HOM05D006345 ORTHO05D007428 1.9e-79 300.1 249 57.0
arahy.Tifrunner.gnm1.ann1.S1VR06 Arachis hypogaea HOM05D006345 ORTHO05D007428 1.9e-79 300.1 251 59.8
arahy.Tifrunner.gnm1.ann1.P3RVZQ Arachis hypogaea HOM05D006345 ORTHO05D007428 2.5e-79 299.7 245 60.4
Gohir.A10G163600 Gossypium hirsutum HOM05D006345 ORTHO05D007428 2.5e-79 299.7 249 58.6
Oeu012935.1 Olea europaea HOM05D006345 ORTHO05D007428 2.5e-79 299.7 210 67.1
Sed0021159 Sechium edule HOM05D006345 ORTHO05D007428 2.5e-79 299.7 247 61.9
Thecc.04G283900 Theobroma cacao HOM05D006345 ORTHO05D007428 2.5e-79 299.7 250 58.4
AT3G13440 Arabidopsis thaliana HOM05D006345 ORTHO05D007428 3.2e-79 299.3 246 60.2
arahy.Tifrunner.gnm1.ann1.W97VC3 Arachis hypogaea HOM05D006345 ORTHO05D007428 4.2e-79 298.9 251 59.8
Gorai.011G189500 Gossypium raimondii HOM05D006345 ORTHO05D007428 4.2e-79 298.9 249 58.2
Rhsim13G0136400 Rhododendron simsii HOM05D006345 ORTHO05D007428 4.2e-79 298.9 245 60.8
Potri.001G073700 Populus trichocarpa HOM05D006345 ORTHO05D007428 5.5e-79 298.5 252 58.7
ATR0561G247 Amborella trichopoda HOM05D006345 ORTHO05D007428 9.4e-79 297.7 246 59.3
CAN.G575.62 Capsicum annuum HOM05D006345 ORTHO05D007428 9.4e-79 297.7 211 65.4
Cc09_g04580 Coffea canephora HOM05D006345 ORTHO05D007428 9.4e-79 297.7 245 60.4
TWI53G2073 Tripterygium wilfordii HOM05D006345 ORTHO05D007428 1.2e-78 297.4 250 60.0
DCAR_001254 Daucus carota HOM05D006345 ORTHO05D007428 1.6e-78 297.0 245 59.2
PGSC0003DMG400023836 Solanum tuberosum HOM05D006345 ORTHO05D007428 2.7e-78 296.2 211 65.9
TPR.G7580 Trifolium pratense HOM05D006345 ORTHO05D007428 2.7e-78 296.2 226 62.4
SalBow7G0027 Salvia bowleyana HOM05D006345 ORTHO05D007428 4.7e-78 295.4 209 65.6
Peaxi162Scf00062g10131 Petunia axillaris HOM05D006345 ORTHO05D007428 6.1e-78 295.0 211 64.5
AL3G25340 Arabidopsis lyrata HOM05D006345 ORTHO05D007428 7.9e-78 294.7 246 58.9
MSTRG.21400 Avicennia marina HOM05D006345 ORTHO05D007428 1.0e-77 294.3 243 58.8
Migut.D00572 Erythranthe guttata HOM05D006345 ORTHO05D007428 1.0e-77 294.3 248 58.5
Gohir.D10G170000 Gossypium hirsutum HOM05D006345 ORTHO05D007428 1.0e-77 294.3 249 57.4
Sp3g11640 Schrenkiella parvula HOM05D006345 ORTHO05D007428 1.0e-77 294.3 245 60.0
CANSAT11G1250 Cannabis sativa HOM05D006345 ORTHO05D007428 1.4e-77 293.9 210 66.2
Nitab4.5_0001925g0110 Nicotiana tabacum HOM05D006345 ORTHO05D007428 1.4e-77 293.9 209 64.6
Sopen12g034690 Solanum pennellii HOM05D006345 ORTHO05D007428 1.4e-77 293.9 211 64.9
Eucgr.F03783 Eucalyptus grandis HOM05D006345 ORTHO05D007428 1.8e-77 293.5 256 57.4
RcHm_v2.0_Chr5g0022101 Rosa chinensis HOM05D006345 ORTHO05D007428 1.8e-77 293.5 245 59.2
EL10Ac3g05939 Beta vulgaris HOM05D006345 ORTHO05D007428 2.3e-77 293.1 242 58.3
AUR62015383 Chenopodium quinoa HOM05D006345 ORTHO05D007428 2.3e-77 293.1 242 58.7
FvH4_3g13390 Fragaria vesca HOM05D006345 ORTHO05D007428 2.3e-77 293.1 210 65.7
FAN21G0075 Fragaria x ananassa HOM05D006345 ORTHO05D007428 2.3e-77 293.1 210 65.7
Nitab4.5_0008647g0020 Nicotiana tabacum HOM05D006345 ORTHO05D007428 2.3e-77 293.1 211 64.5
Oeu017184.1 Olea europaea HOM05D006345 ORTHO05D007428 2.3e-77 293.1 234 60.3
QL08p052794 Quercus lobata HOM05D006345 ORTHO05D007428 2.3e-77 293.1 249 59.8
Manes.16G061100 Manihot esculenta HOM05D006345 ORTHO05D007428 3.0e-77 292.7 249 59.4
FAN25G2350 Fragaria x ananassa HOM05D006345 ORTHO05D007428 5.1e-77 292.0 210 65.2
Cc06_g02140 Coffea canephora HOM05D006345 ORTHO05D007428 8.8e-77 291.2 245 59.2
Carub.0003s1288 Capsella rubella HOM05D006345 ORTHO05D007428 1.1e-76 290.8 211 65.4
Thhalv10021414m.g Eutrema salsugineum HOM05D006345 ORTHO05D007428 1.1e-76 290.8 211 64.5
FAN11G3812 Fragaria x ananassa HOM05D006345 ORTHO05D007428 1.5e-76 290.4 210 65.2
SalBow2G1193 Salvia bowleyana HOM05D006345 ORTHO05D007428 2.0e-76 290.0 209 64.6
MD05G1242200 Malus domestica HOM05D006345 ORTHO05D007428 2.6e-76 289.7 239 58.6
BcaB04g21015 Brassica carinata HOM05D006345 ORTHO05D007428 3.3e-76 289.3 211 64.9
BcaC09g48312 Brassica carinata HOM05D006345 ORTHO05D007428 3.3e-76 289.3 246 58.9
C01p51620 Brassica napus HOM05D006345 ORTHO05D007428 3.3e-76 289.3 246 58.9
BolC1t05105H Brassica oleracea HOM05D006345 ORTHO05D007428 3.3e-76 289.3 246 58.9
Ah.07g202050 Amaranthus hybridus HOM05D006345 ORTHO05D007428 5.7e-76 288.5 242 55.8
Carub.0006s3398 Capsella rubella HOM05D006345 ORTHO05D007428 5.7e-76 288.5 211 64.0
ECA238G2485 Erigeron canadensis HOM05D006345 ORTHO05D007428 7.4e-76 288.1 244 57.4
unitig_52.g17581 Utricularia gibba HOM05D006345 ORTHO05D007428 7.4e-76 288.1 244 60.2
PSO675G7514 Papaver somniferum HOM05D006345 ORTHO05D007428 9.7e-76 287.7 255 57.6
Ah.15g099610 Amaranthus hybridus HOM05D006345 ORTHO05D007428 1.3e-75 287.3 242 57.9
A01p40130 Brassica napus HOM05D006345 ORTHO05D007428 1.3e-75 287.3 246 58.9
BraA01t04054Z Brassica rapa HOM05D006345 ORTHO05D007428 2.2e-75 286.6 246 58.5
HanXRQChr14g0447431 Helianthus annuus HOM05D006345 ORTHO05D007428 2.2e-75 286.6 246 55.7
SGA_v2.0_scaffold8G04616 Striga asiatica HOM05D006345 ORTHO05D007428 8.2e-75 284.6 211 62.1
HPP92_018755 Vanilla planifolia HOM05D006345 ORTHO05D007428 1.1e-74 284.3 230 57.8
BraA05t22416Z Brassica rapa HOM05D002140 ORTHO05D007428 1.4e-74 283.9 245 57.6
FAN16G3736 Fragaria x ananassa HOM05D006345 ORTHO05D007428 1.4e-74 283.9 210 64.3
PSO541G0968 Papaver somniferum HOM05D006345 ORTHO05D007428 3.1e-74 282.7 253 56.5
A05p36090 Brassica napus HOM05D002140 ORTHO05D007428 4.1e-74 282.3 245 56.7
BcaC05g29179 Brassica carinata HOM05D002140 ORTHO05D007428 5.3e-74 282.0 243 57.2
C05p54470 Brassica napus HOM05D002140 ORTHO05D007428 5.3e-74 282.0 243 57.2
BolC5t34114H Brassica oleracea HOM05D002140 ORTHO05D007428 5.3e-74 282.0 243 57.2
Lsat_1_v5_gn_3_103240 Lactuca sativa HOM05D006345 ORTHO05D007428 7.0e-74 281.6 227 60.4
PSO782G3410 Papaver somniferum HOM05D006345 ORTHO05D007428 9.1e-74 281.2 214 63.1
Aqoxy3G02382 Aquilegia oxysepala HOM05D006345 ORTHO05D007428 1.2e-73 280.8 211 61.1
CiPaw.14G048700 Carya illinoinensis HOM05D006345 ORTHO05D007428 5.9e-73 278.5 211 63.0
SHI16738 Sapria himalayana HOM05D006345 ORTHO05D007428 7.7e-73 278.1 209 63.6
Zm00001eb211470 Zea mays HOM05D006345 ORTHO05D007428 2.5e-71 273.1 210 61.9
Os03g0824200 Oryza sativa ssp. japonica HOM05D006345 ORTHO05D007428 7.2e-71 271.6 242 55.0
CDE06G0136 Ceratophyllum demersum HOM05D006345 ORTHO05D007428 9.4e-71 271.2 211 61.6
CDE04G1044 Ceratophyllum demersum HOM05D006345 ORTHO05D007428 2.1e-70 270.0 247 55.5
Thhalv10009961m.g Eutrema salsugineum HOM05D006345 ORTHO05D007428 6.3e-67 258.5 211 58.3
Lsat_1_v5_gn_2_63801 Lactuca sativa HOM05D006345 ORTHO05D007428 1.1e-66 257.7 252 52.0
AUR62002307 Chenopodium quinoa HOM05D006345 ORTHO05D007428 4.7e-62 242.3 242 51.2
Solyc12g100070.3 Solanum lycopersicum HOM05D006345 ORTHO05D007428 2.3e-61 240.0 177 62.7
SEGI_21458 Sequoiadendron giganteum HOM05D006345 ORTHO05D007428 2.0e-60 236.9 164 68.9
Zm00001eb187530 Zea mays HOM05D006345 ORTHO05D007428 4.1e-58 229.2 186 60.8
Cre01.g036750 Chlamydomonas reinhardtii HOM05D006345 ORTHO05D007428 2.3e-45 186.8 212 47.6
Zm00001eb141630 Zea mays HOM05D006345 ORTHO05D007428 2.1e-38 163.7 144 57.6
CSS0000171 Camellia sinensis var. sinensis HOM05D006345 ORTHO05D007428 7.0e-34 148.7 137 54.0
CAN.G1126.44 Capsicum annuum HOM05D006345 ORTHO05D007428 9.2e-34 148.3 174 45.4
MCO02G297 Micromonas commoda HOM05D006345 ORTHO05D007428 2.0e-33 147.1 178 46.1
Sabra03G0114100 Salix brachista HOM05D000029 ORTHO05D000854 6.0e-25 119.0 189 37.0
Zm00001eb356470 Zea mays HOM05D006345 ORTHO05D007428 6.0e-25 119.0 127 52.8
Potri.003G157201 Populus trichocarpa HOM05D006345 ORTHO05D007428 1.7e-24 117.5 104 55.8
ATR0006G036 Amborella trichopoda HOM05D006345 ORTHO05D007428 2.0e-12 77.4 69 53.6
Lj1P1152T38 Lonicera japonica HOM05D006345 ORTHO05D007428 1.3e-08 64.7 44 61.4


User provided reference genes

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