Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c9_15980 Physcomitrium patens HOM05D006118 ORTHO05D007750 1.4e-195 686.0 337 100.0
Pp3c15_15980 Physcomitrium patens HOM05D006118 ORTHO05D007750 1.4e-166 589.7 299 95.0
AagrBONN_evm.TU.Sc2ySwM_228.1339 Anthoceros agrestis HOM05D006118 ORTHO05D007750 1.2e-125 453.8 298 71.5
Mapoly0073s0070 Marchantia polymorpha HOM05D006118 ORTHO05D007750 2.6e-120 436.0 299 69.2
Gorai.005G073100 Gossypium raimondii HOM05D006118 ORTHO05D007750 1.0e-105 387.5 290 63.1
Gohir.A02G058900 Gossypium hirsutum HOM05D006118 ORTHO05D007750 1.8e-105 386.7 290 62.8
CANSAT25G1353 Cannabis sativa HOM05D006118 ORTHO05D007750 3.1e-105 386.0 296 61.5
Thecc.04G313700 Theobroma cacao HOM05D006118 ORTHO05D007750 3.1e-105 386.0 288 62.8
CiPaw.16G067300 Carya illinoinensis HOM05D006118 ORTHO05D007750 4.0e-105 385.6 296 62.5
ClCG05G015850 Citrullus lanatus HOM05D006118 ORTHO05D007750 5.2e-105 385.2 288 63.2
Gohir.D02G064600 Gossypium hirsutum HOM05D006118 ORTHO05D007750 5.2e-105 385.2 290 62.8
CsaV3_4G036130 Cucumis sativus L. HOM05D006118 ORTHO05D007750 6.8e-105 384.8 299 61.2
MELO3C016921.2 Cucumis melo HOM05D006118 ORTHO05D007750 8.9e-105 384.4 288 62.8
RcHm_v2.0_Chr6g0312021 Rosa chinensis HOM05D006118 ORTHO05D007750 5.8e-104 381.7 295 61.4
FvH4_2g30820 Fragaria vesca HOM05D006118 ORTHO05D007750 7.5e-104 381.3 295 61.0
FAN20G1786 Fragaria x ananassa HOM05D006118 ORTHO05D007750 7.5e-104 381.3 295 61.0
FAN15G2451 Fragaria x ananassa HOM05D006118 ORTHO05D007750 3.7e-103 379.0 295 60.7
GSVIVG01035487001 Vitis vinifera HOM05D006118 ORTHO05D007750 3.7e-103 379.0 278 64.4
Duzib151G0955 Durio zibethinus HOM05D006118 ORTHO05D007750 8.3e-103 377.9 283 63.3
FAN27G1493 Fragaria x ananassa HOM05D006118 ORTHO05D007750 1.1e-102 377.5 295 60.7
Cpa.g.sc146.16 Carica papaya HOM05D006118 ORTHO05D007750 3.2e-102 375.9 297 59.3
Eucgr.C00739 Eucalyptus grandis HOM05D006118 ORTHO05D007750 7.0e-102 374.8 289 61.6
MD08G1073200 Malus domestica HOM05D006118 ORTHO05D007750 1.2e-101 374.0 297 59.3
Hma1.2p1_0641F.1_g194200 Hydrangea macrophylla HOM05D006118 ORTHO05D007750 2.7e-101 372.9 295 62.4
Ca_13095_v3 Cicer arietinum L. HOM05D006118 ORTHO05D007750 7.8e-101 371.3 290 61.4
AL1G54870 Arabidopsis lyrata HOM05D006118 ORTHO05D007750 1.3e-100 370.5 291 60.8
MD15G1048100 Malus domestica HOM05D006118 ORTHO05D007750 1.7e-100 370.2 297 58.6
Sed0026686 Sechium edule HOM05D006118 ORTHO05D007750 1.7e-100 370.2 308 57.8
TAR624G0180 Trochodendron aralioides HOM05D006118 ORTHO05D007750 1.7e-100 370.2 289 62.3
Thhalv10011644m.g Eutrema salsugineum HOM05D006118 ORTHO05D007750 2.3e-100 369.8 291 60.5
AT1G48270 Arabidopsis thaliana HOM05D006118 ORTHO05D007750 3.0e-100 369.4 291 60.5
PSO421G0086 Papaver somniferum HOM05D006118 ORTHO05D007750 3.0e-100 369.4 287 61.7
Atru.chr4.3167 Acer truncatum HOM05D006118 ORTHO05D007750 5.0e-100 368.6 285 61.8
Carub.0001s3740 Capsella rubella HOM05D006118 ORTHO05D007750 8.6e-100 367.9 291 60.5
Ciclev10005468m.g Citrus clementina HOM05D006118 ORTHO05D007750 8.6e-100 367.9 296 59.1
Lj5g0024511 Lotus japonicus HOM05D006118 ORTHO05D007750 1.1e-99 367.5 290 60.7
Migut.E01785 Erythranthe guttata HOM05D006118 ORTHO05D007750 1.9e-99 366.7 292 60.3
PSO063G1448 Papaver somniferum HOM05D006118 ORTHO05D007750 1.9e-99 366.7 287 61.3
Phvul.001G044800 Phaseolus vulgaris HOM05D006118 ORTHO05D007750 2.5e-99 366.3 285 61.1
Glyma.17G219300 Glycine max HOM05D006118 ORTHO05D007750 3.3e-99 365.9 294 59.5
HanXRQChr09g0261891 Helianthus annuus HOM05D006118 ORTHO05D007750 4.3e-99 365.5 295 60.0
Aqoxy7G01030 Aquilegia oxysepala HOM05D006118 ORTHO05D007750 9.5e-99 364.4 285 63.2
CARHR037890 Cardamine hirsuta HOM05D006118 ORTHO05D007750 9.5e-99 364.4 291 60.1
Sp1g35230 Schrenkiella parvula HOM05D006118 ORTHO05D007750 1.2e-98 364.0 289 60.2
Lsat_1_v5_gn_8_70541 Lactuca sativa HOM05D006118 ORTHO05D007750 2.1e-98 363.2 293 60.8
Prupe.1G402500 Prunus persica HOM05D006118 ORTHO05D007750 2.1e-98 363.2 297 57.9
BcaB07g33772 Brassica carinata HOM05D006118 ORTHO05D007750 2.8e-98 362.8 289 60.2
BcaC08g43024 Brassica carinata HOM05D006118 ORTHO05D007750 2.8e-98 362.8 289 60.2
A06p04570 Brassica napus HOM05D006118 ORTHO05D007750 2.8e-98 362.8 289 60.2
C06p02770 Brassica napus HOM05D006118 ORTHO05D007750 2.8e-98 362.8 289 60.2
BolC6t35406H Brassica oleracea HOM05D006118 ORTHO05D007750 2.8e-98 362.8 289 60.2
BraA06t23661Z Brassica rapa HOM05D006118 ORTHO05D007750 2.8e-98 362.8 289 60.2
CSS0045297 Camellia sinensis var. sinensis HOM05D006118 ORTHO05D007750 2.8e-98 362.8 279 62.0
arahy.Tifrunner.gnm1.ann1.ZI0SGT Arachis hypogaea HOM05D006118 ORTHO05D007750 1.8e-97 360.1 282 61.3
SGA_v2.0_scaffold163G37995 Striga asiatica HOM05D006118 ORTHO05D007750 2.3e-97 359.8 303 59.1
Solyc08g061260.4 Solanum lycopersicum HOM05D006118 ORTHO05D007750 1.2e-96 357.5 287 61.0
Sopen08g016640 Solanum pennellii HOM05D006118 ORTHO05D007750 1.2e-96 357.5 287 61.0
Sabra08G0153100 Salix brachista HOM05D006118 ORTHO05D007750 2.0e-96 356.7 301 58.1
MSTRG.14088 Avicennia marina HOM05D006118 ORTHO05D007750 2.6e-96 356.3 292 59.9
DCAR_003726 Daucus carota HOM05D006118 ORTHO05D007750 3.4e-96 355.9 301 57.5
PGSC0003DMG402012996 Solanum tuberosum HOM05D006118 ORTHO05D007750 5.8e-96 355.1 287 60.3
Glyma.14G107200 Glycine max HOM05D006118 ORTHO05D007750 9.8e-96 354.4 280 60.7
VMungo0647G1968 Vigna mungo HOM05D006118 ORTHO05D007750 2.9e-95 352.8 275 61.1
SMO119G0499 Selaginella moellendorffii HOM05D006118 ORTHO05D007750 3.7e-95 352.4 265 63.8
arahy.Tifrunner.gnm1.ann1.Z643MN Arachis hypogaea HOM05D006118 ORTHO05D007750 6.4e-95 351.7 291 59.1
PGR142G4277 Punica granatum HOM05D006118 ORTHO05D007750 6.4e-95 351.7 270 61.5
Os06g0199800 Oryza sativa ssp. japonica HOM05D006118 ORTHO05D007750 1.1e-94 350.9 288 57.3
Rhsim13G0216900 Rhododendron simsii HOM05D006118 ORTHO05D007750 1.9e-94 350.1 281 59.8
Lalb_Chr24g0393681 Lupinus albus HOM05D006118 ORTHO05D007750 4.1e-94 349.0 285 58.6
Manes.03G212200 Manihot esculenta HOM05D006118 ORTHO05D007750 2.7e-93 346.3 285 59.6
Cc08_g01010 Coffea canephora HOM05D006118 ORTHO05D007750 4.6e-93 345.5 293 57.7
CDE06G0461 Ceratophyllum demersum HOM05D006118 ORTHO05D007750 2.5e-91 339.7 270 60.0
Sc06g0000090 Simmondsia chinensis HOM05D006118 ORTHO05D007750 5.2e-89 332.0 292 55.8
Nitab4.5_0001576g0100 Nicotiana tabacum HOM05D006118 ORTHO05D007750 3.4e-88 329.3 304 56.6
Actinidia01325 Actinidia chinensis HOM05D006118 ORTHO05D007750 4.4e-88 328.9 266 59.8
Medtr1g015010 Medicago truncatula HOM05D006118 ORTHO05D007750 4.4e-88 328.9 285 57.9
vmacro04115 Vaccinium macrocarpon HOM05D006118 ORTHO05D007750 1.3e-87 327.4 347 49.3
THA.LOC104824720 Tarenaya hassleriana HOM05D006118 ORTHO05D007750 1.7e-87 327.0 289 57.1
Aa31LG10G5490 Aethionema arabicum HOM05D006118 ORTHO05D007750 1.3e-84 317.4 296 55.4
Dinv41849 Davidia involucrata HOM05D006118 ORTHO05D007750 1.3e-84 317.4 236 63.6
ECA236G0212 Erigeron canadensis HOM05D006118 ORTHO05D007750 1.1e-83 314.3 239 61.9
Psat6g023080 Pisum sativum HOM05D006118 ORTHO05D007750 1.5e-83 313.9 276 57.2
TWI53G1421 Tripterygium wilfordii HOM05D006118 ORTHO05D007750 1.5e-83 313.9 295 53.6
Hma1.2p1_0641F.1_g194210 Hydrangea macrophylla HOM05D006118 ORTHO05D007750 1.6e-82 310.5 226 65.0
AUR62020280 Chenopodium quinoa HOM05D006118 ORTHO05D007750 4.7e-82 308.9 268 57.5
FAN24G3410 Fragaria x ananassa HOM05D006118 ORTHO05D007750 6.2e-82 308.5 232 60.3
SalBow1G5335 Salvia bowleyana HOM05D006118 ORTHO05D007750 8.1e-82 308.1 388 44.1
COL.COLO4_34509 Corchorus olitorius HOM05D006118 ORTHO05D007750 1.3e-79 300.8 335 49.0
Oeu036787.2 Olea europaea HOM05D006118 ORTHO05D007750 1.7e-79 300.4 248 58.5
TPR.G38901 Trifolium pratense HOM05D006118 ORTHO05D007750 2.2e-79 300.1 252 57.5
Potri.008G206000 Populus trichocarpa HOM05D006118 ORTHO05D007750 3.5e-77 292.7 266 54.9
CBR_g36835 Chara braunii HOM05D006118 ORTHO05D007750 4.6e-77 292.4 220 60.0
Ah.12g061330 Amaranthus hybridus HOM05D006118 ORTHO05D007750 1.1e-75 287.7 275 51.6
EL10Ac2g02406 Beta vulgaris HOM05D006118 ORTHO05D007750 9.0e-73 278.1 287 48.8
Oeu024208.1 Olea europaea HOM05D006118 ORTHO05D007750 2.0e-72 276.9 237 57.8
ATR0598G044 Amborella trichopoda HOM05D006118 ORTHO05D007750 1.6e-69 267.3 196 62.8
Peaxi162Scf00486g00116 Petunia axillaris HOM05D006118 ORTHO05D007750 6.0e-69 265.4 285 49.5
Hund25545 Selenicereus undatus HOM05D006118 ORTHO05D007750 9.6e-67 258.1 276 50.0
AUR62037725 Chenopodium quinoa HOM05D006118 ORTHO05D007750 3.2e-62 243.0 235 52.8
Zm00001eb278600 Zea mays HOM05D006118 ORTHO05D007750 4.2e-62 242.7 193 58.5
HPP92_016236 Vanilla planifolia HOM05D006118 ORTHO05D007750 6.5e-55 218.8 284 43.3
arahy.Tifrunner.gnm1.ann1.C1NZN8 Arachis hypogaea HOM05D006118 ORTHO05D007750 5.5e-54 215.7 299 43.5
Haze_18321 Corylus avellana HOM05D006118 ORTHO05D007750 7.9e-53 211.8 622 28.0
Lj7A209G43 Lonicera japonica HOM05D006118 ORTHO05D007750 6.7e-52 208.8 230 48.7
BcaB01g03835 Brassica carinata HOM05D006118 ORTHO05D007750 1.3e-50 204.5 229 49.8
BcaB08g36375 Brassica carinata HOM05D006118 ORTHO05D007750 4.6e-45 186.0 229 46.7
PGSC0003DMG401012996 Solanum tuberosum HOM05D006118 ORTHO05D007750 3.0e-44 183.3 148 58.1
arahy.Tifrunner.gnm1.ann1.K6H74S Arachis hypogaea HOM05D006118 ORTHO05D007750 3.1e-41 173.3 135 59.3
MD15G1048300 Malus domestica HOM05D006118 ORTHO05D007750 5.3e-41 172.6 235 43.0
unitig_8.g4842 Utricularia gibba HOM05D006118 ORTHO05D007750 5.3e-41 172.6 146 58.2
Nitab4.5_0009849g0030 Nicotiana tabacum HOM05D006118 ORTHO05D007750 5.5e-38 162.5 266 39.5
BcaB07g32513 Brassica carinata HOM05D006118 ORTHO05D007750 3.3e-35 153.3 194 41.8
PRCOL_00004868 Prasinoderma coloniale HOM05D006118 ORTHO05D007750 4.3e-35 152.9 277 35.0
BcaB01g01553 Brassica carinata HOM05D006118 ORTHO05D007750 1.3e-34 151.4 145 52.4
PRCOL_00005697 Prasinoderma coloniale HOM05D006118 ORTHO05D007750 6.9e-33 145.6 273 32.6
arahy.Tifrunner.gnm1.ann1.M0UG3B Arachis hypogaea HOM05D005235 ORTHO05D006938 6.5e-31 139.0 129 55.0
Lalb_Chr23g0268011 Lupinus albus HOM05D006118 ORTHO05D007750 3.3e-27 126.7 112 52.7
ATR0684G160 Amborella trichopoda HOM05D006118 ORTHO05D007750 3.7e-26 123.2 87 63.2
MCO03G156 Micromonas commoda HOM05D006118 ORTHO05D007750 2.4e-25 120.6 346 28.9
Lj7A209G42 Lonicera japonica HOM05D006118 ORTHO05D007750 3.1e-25 120.2 90 62.2
SEGI_23264 Sequoiadendron giganteum HOM05D006118 ORTHO05D007750 3.7e-18 96.7 76 57.9
Lalb_Chr23g0268021 Lupinus albus HOM05D006118 ORTHO05D007750 8.5e-07 58.9 47 57.4
SEGI_18851 Sequoiadendron giganteum HOM05D006118 ORTHO05D007750 7.2e-06 55.8 40 60.0


User provided reference genes

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