Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c9_15730 Physcomitrium patens HOM05D006805 ORTHO05D008656 4.0e-248 860.9 416 100.0
Pp3c15_5920 Physcomitrium patens HOM05D006805 ORTHO05D008656 6.1e-188 661.0 412 77.2
AagrBONN_evm.TU.Sc2ySwM_228.1023 Anthoceros agrestis HOM05D006805 ORTHO05D001783 2.8e-116 422.9 408 53.4
SMO141G0060 Selaginella moellendorffii HOM05D006805 ORTHO05D008656 1.8e-91 340.5 356 46.6
Mapoly0033s0048 Marchantia polymorpha HOM05D006805 ORTHO05D008656 1.5e-90 337.4 407 45.0
Aqoxy5G01548 Aquilegia oxysepala HOM05D006805 ORTHO05D008656 2.1e-84 317.0 388 43.6
Nn1g05800 Nelumbo nucifera HOM05D006805 ORTHO05D008656 8.2e-84 315.1 380 42.9
Psat4g096160 Pisum sativum HOM05D006805 ORTHO05D008656 2.4e-83 313.5 369 43.6
QL06p035053 Quercus lobata HOM05D006805 ORTHO05D008656 2.6e-82 310.1 402 42.5
arahy.Tifrunner.gnm1.ann1.FKKR7E Arachis hypogaea HOM05D006805 ORTHO05D008656 1.0e-81 308.1 350 45.4
CAN.G358.30 Capsicum annuum HOM05D006805 ORTHO05D008656 1.0e-81 308.1 403 41.4
Cfa006913 Carpinus fangiana HOM05D006805 ORTHO05D008656 1.0e-81 308.1 368 44.6
Rhsim08G0122900 Rhododendron simsii HOM05D006805 ORTHO05D008656 1.3e-81 307.8 375 44.0
Solyc02g084810.3 Solanum lycopersicum HOM05D006805 ORTHO05D008656 1.3e-81 307.8 405 42.2
Sopen02g029480 Solanum pennellii HOM05D006805 ORTHO05D008656 1.3e-81 307.8 405 42.2
Hma1.2p1_0913F.1_g235930 Hydrangea macrophylla HOM05D006805 ORTHO05D008656 3.8e-81 306.2 405 42.7
CANSAT01G1867 Cannabis sativa HOM05D006805 ORTHO05D008656 5.0e-81 305.8 404 40.3
Medtr8g076840 Medicago truncatula HOM05D006805 ORTHO05D008656 6.5e-81 305.4 365 42.7
Hund16454 Selenicereus undatus HOM05D006805 ORTHO05D008656 6.5e-81 305.4 388 41.5
CSS0042312 Camellia sinensis var. sinensis HOM05D006805 ORTHO05D008656 8.5e-81 305.1 393 42.7
Potri.007G019400 Populus trichocarpa HOM05D006805 ORTHO05D008656 1.4e-80 304.3 372 42.2
Duzib147G1209 Durio zibethinus HOM05D006805 ORTHO05D008656 2.5e-80 303.5 362 43.4
VMungo0251G3732 Vigna mungo HOM05D006805 ORTHO05D008656 2.5e-80 303.5 414 41.8
Migut.H02510 Erythranthe guttata HOM05D006805 ORTHO05D008656 5.5e-80 302.4 397 41.8
Gohir.A02G167800 Gossypium hirsutum HOM05D006805 ORTHO05D008656 7.2e-80 302.0 363 43.0
Gohir.D03G012200 Gossypium hirsutum HOM05D006805 ORTHO05D008656 9.3e-80 301.6 363 43.5
Manes.01G140000 Manihot esculenta HOM05D006805 ORTHO05D008656 9.3e-80 301.6 347 45.0
Gorai.003G012500 Gossypium raimondii HOM05D006805 ORTHO05D008656 1.2e-79 301.2 363 43.3
Peaxi162Scf00418g00926 Petunia axillaris HOM05D006805 ORTHO05D008656 1.6e-79 300.8 374 43.3
Lalb_Chr16g0391011 Lupinus albus HOM05D006805 ORTHO05D008656 2.1e-79 300.4 367 42.8
Sed0012409 Sechium edule HOM05D006805 ORTHO05D008656 2.1e-79 300.4 402 39.8
Prupe.7G161800 Prunus persica HOM05D006805 ORTHO05D008656 2.7e-79 300.1 406 42.1
TAR381G0553 Trochodendron aralioides HOM05D006805 ORTHO05D008656 2.7e-79 300.1 397 41.6
PSO731G0058 Papaver somniferum HOM05D006805 ORTHO05D008656 3.6e-79 299.7 374 42.5
Glyma.02G052900 Glycine max HOM05D006805 ORTHO05D008656 4.6e-79 299.3 375 43.5
COL.COLO4_22005 Corchorus olitorius HOM05D006805 ORTHO05D008656 7.9e-79 298.5 364 44.5
Lj4g0018076 Lotus japonicus HOM05D006805 ORTHO05D008656 7.9e-79 298.5 341 43.7
THA.LOC104804245 Tarenaya hassleriana HOM05D006805 ORTHO05D008656 7.9e-79 298.5 407 40.5
HPP92_008328 Vanilla planifolia HOM05D006805 ORTHO05D008656 7.9e-79 298.5 363 42.1
CsaV3_6G046700 Cucumis sativus L. HOM05D006805 ORTHO05D008656 1.0e-78 298.1 403 41.4
Cc07_g10060 Coffea canephora HOM05D006805 ORTHO05D008656 1.3e-78 297.7 406 42.1
GSVIVG01018866001 Vitis vinifera HOM05D006805 ORTHO05D008656 3.0e-78 296.6 406 41.9
C01p02610 Brassica napus HOM05D006805 ORTHO05D008656 3.9e-78 296.2 404 39.6
BolC1t00250H Brassica oleracea HOM05D006805 ORTHO05D008656 3.9e-78 296.2 406 40.6
CiPaw.08G138000 Carya illinoinensis HOM05D006805 ORTHO05D008656 3.9e-78 296.2 402 42.0
BcaNung00732 Brassica carinata HOM05D006805 ORTHO05D008656 5.1e-78 295.8 405 40.5
Thecc.01G027300 Theobroma cacao HOM05D006805 ORTHO05D008656 5.1e-78 295.8 371 42.6
Atru.chr3.728 Acer truncatum HOM05D006805 ORTHO05D008656 6.7e-78 295.4 362 43.4
Thhalv10000178m.g Eutrema salsugineum HOM05D006805 ORTHO05D008656 6.7e-78 295.4 384 40.4
FvH4_1g12510 Fragaria vesca HOM05D006805 ORTHO05D008656 6.7e-78 295.4 407 41.5
Ciclev10025725m.g Citrus clementina HOM05D006805 ORTHO05D008656 8.7e-78 295.0 357 43.1
MD15G1252400 Malus domestica HOM05D006805 ORTHO05D008656 8.7e-78 295.0 412 40.5
Phvul.003G257300 Phaseolus vulgaris HOM05D006805 ORTHO05D008656 8.7e-78 295.0 382 41.9
Sp7g34100 Schrenkiella parvula HOM05D006805 ORTHO05D008656 1.5e-77 294.3 384 40.4
ECA238G0382 Erigeron canadensis HOM05D006805 ORTHO05D008656 1.9e-77 293.9 378 40.2
RcHm_v2.0_Chr2g0100411 Rosa chinensis HOM05D006805 ORTHO05D008656 2.5e-77 293.5 405 41.7
arahy.Tifrunner.gnm1.ann1.P9L48X Arachis hypogaea HOM05D006805 ORTHO05D008656 3.3e-77 293.1 376 42.0
Carub.0007s0387 Capsella rubella HOM05D006805 ORTHO05D008656 4.3e-77 292.7 384 40.1
TWI73G0963 Tripterygium wilfordii HOM05D006805 ORTHO05D008656 4.3e-77 292.7 397 39.8
MSTRG.2490 Avicennia marina HOM05D006805 ORTHO05D008656 9.7e-77 291.6 398 40.2
AL7G14650 Arabidopsis lyrata HOM05D006805 ORTHO05D008656 1.3e-76 291.2 404 38.6
Thhalv10025347m.g Eutrema salsugineum HOM05D006805 ORTHO05D008656 1.6e-76 290.8 385 40.5
Eucgr.J02381 Eucalyptus grandis HOM05D006805 ORTHO05D008656 3.7e-76 289.7 402 41.0
CARHR244770 Cardamine hirsuta HOM05D006805 ORTHO05D008656 8.2e-76 288.5 384 39.3
HanXRQChr14g0441241 Helianthus annuus HOM05D006805 ORTHO05D008656 3.1e-75 286.6 391 40.2
BraA01t00229Z Brassica rapa HOM05D006805 ORTHO05D008656 5.3e-75 285.8 414 38.6
Dinv40030 Davidia involucrata HOM05D006805 ORTHO05D008656 1.2e-74 284.6 433 39.3
FAN19G2522 Fragaria x ananassa HOM05D006805 ORTHO05D008656 5.9e-74 282.3 420 40.2
AUR62007618 Chenopodium quinoa HOM05D006805 ORTHO05D008656 7.7e-74 282.0 353 42.2
A01p02400 Brassica napus HOM05D000394 ORTHO05D008656 1.0e-73 281.6 429 37.8
Haze_03843 Corylus avellana HOM05D006805 ORTHO05D008656 1.0e-73 281.6 425 39.3
Nitab4.5_0004708g0010 Nicotiana tabacum HOM05D006805 ORTHO05D008656 1.3e-73 281.2 377 40.3
ATR1154G040 Amborella trichopoda HOM05D006805 ORTHO05D008656 1.7e-73 280.8 327 43.1
PGR102G0609 Punica granatum HOM05D006805 ORTHO05D008656 1.7e-73 280.8 382 40.1
MELO3C007867.2 Cucumis melo HOM05D006805 ORTHO05D008656 1.4e-72 277.7 429 37.5
AT4G36440 Arabidopsis thaliana HOM05D006805 ORTHO05D008656 2.1e-71 273.9 406 38.2
Sabra07G0016600 Salix brachista HOM05D006805 ORTHO05D008656 6.1e-71 272.3 399 38.3
Duzib264G1030 Durio zibethinus HOM05D006805 ORTHO05D008656 1.1e-69 268.1 387 39.0
DCAR_025973 Daucus carota HOM05D006805 ORTHO05D008656 1.5e-69 267.7 340 41.8
CDE06G0805 Ceratophyllum demersum HOM05D006805 ORTHO05D008656 2.0e-69 267.3 359 39.8
SGA_v2.0_scaffold51G18803 Striga asiatica HOM05D006805 ORTHO05D008656 2.8e-68 263.5 465 35.5
Nitab4.5_0000723g0180 Nicotiana tabacum HOM05D006805 ORTHO05D008656 3.1e-67 260.0 387 37.2
BcaNung05308 Brassica carinata HOM05D000394 ORTHO05D000299 2.6e-66 256.9 332 40.7
SalBow8G5631 Salvia bowleyana HOM05D006805 ORTHO05D008656 1.7e-65 254.2 408 37.5
unitig_61.g26353 Utricularia gibba HOM05D006805 ORTHO05D008656 2.2e-65 253.8 313 42.5
vmacro17722 Vaccinium macrocarpon HOM05D006805 ORTHO05D008656 1.1e-64 251.5 312 43.9
Ca_22341_v3 Cicer arietinum L. HOM05D006805 ORTHO05D008656 1.4e-62 244.6 363 39.4
FAN23G0481 Fragaria x ananassa HOM05D006805 ORTHO05D008656 3.9e-62 243.0 414 37.2
ClCG01G019940 Citrullus lanatus HOM05D006531 ORTHO05D008656 1.5e-61 241.1 374 37.7
Hma1.2p1_2955F.1_g330740 Hydrangea macrophylla HOM05D006805 ORTHO05D008656 2.6e-61 240.4 326 41.1
Hma1.2p1_0913F.1_g235940 Hydrangea macrophylla HOM05D006805 ORTHO05D008656 4.4e-61 239.6 291 44.0
MBI16_g23836_MAGBIO Magnolia biondii HOM05D006805 ORTHO05D008656 5.5e-56 222.6 356 38.2
AUR62004104 Chenopodium quinoa HOM05D006805 ORTHO05D008656 7.2e-56 222.2 238 45.0
Lj4C209T2 Lonicera japonica HOM05D006805 ORTHO05D008656 6.7e-54 215.7 262 41.6
Aa31LG6G13250 Aethionema arabicum HOM05D006805 ORTHO05D008656 8.8e-54 215.3 291 39.9
Pp3c26_9360 Physcomitrium patens HOM05D006805 ORTHO05D008656 3.7e-52 209.9 186 60.8
Sc03g0003200 Simmondsia chinensis HOM05D006805 ORTHO05D004508 1.8e-51 207.6 236 43.2
FAN26G3258 Fragaria x ananassa HOM05D006805 ORTHO05D008656 5.0e-49 199.5 414 33.1
EL10As8g23891 Beta vulgaris HOM05D006805 ORTHO05D008656 8.5e-49 198.7 209 45.5
SGA_v2.0_scaffold7G03543 Striga asiatica HOM05D006805 ORTHO05D003527 1.7e-41 174.5 213 42.7
Sc03g0003190 Simmondsia chinensis HOM05D006805 ORTHO05D008656 3.2e-40 170.2 195 43.1
arahy.Tifrunner.gnm1.ann1.CY3TH7 Arachis hypogaea HOM05D006805 ORTHO05D008656 3.1e-35 153.7 378 28.8
TPR.G21535 Trifolium pratense HOM05D006805 ORTHO05D008656 9.5e-32 142.1 160 45.6
Zm00001eb128340 Zea mays HOM05D006805 ORTHO05D008656 3.6e-31 140.2 227 37.9
HanXRQChr12g0370271 Helianthus annuus HOM05D006805 ORTHO05D008656 1.4e-30 138.3 246 35.4
Lsat_1_v5_gn_2_78040 Lactuca sativa HOM05D006805 ORTHO05D008656 5.2e-30 136.3 217 36.4
Dinv10224 Davidia involucrata HOM05D006805 ORTHO05D008656 2.0e-29 134.4 139 48.2
HanXRQChr09g0256121 Helianthus annuus HOM05D006805 ORTHO05D008656 5.6e-24 116.3 150 42.7
Glyma.16G133100 Glycine max HOM05D006805 ORTHO05D008656 1.4e-22 111.7 109 45.9
Cpa.g.sc6.179 Carica papaya HOM05D006805 ORTHO05D008656 3.1e-22 110.5 357 25.8
TPR.G21539 Trifolium pratense HOM05D000894 ORTHO05D001833 5.2e-22 109.8 114 44.7
Glyma.10G129950 Glycine max HOM05D006805 ORTHO05D008656 5.8e-21 106.3 107 46.7
AL6G38800 Arabidopsis lyrata HOM05D006805 ORTHO05D008656 4.1e-19 100.1 163 38.0
EL10Ac7g17413 Beta vulgaris HOM05D006805 ORTHO05D008656 1.0e-17 95.5 102 44.1
HanXRQChr16g0499431 Helianthus annuus HOM05D006805 ORTHO05D008656 3.7e-12 77.0 307 26.1
Lj2g0002148 Lotus japonicus HOM05D006805 ORTHO05D008656 3.7e-12 77.0 99 43.4
MD02G1139100 Malus domestica HOM05D006805 ORTHO05D008656 2.3e-09 67.8 76 42.1


User provided reference genes

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