Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c9_15440 Physcomitrium patens HOM05D006092 ORTHO05D007508 3.5e-86 321.6 167 100.0
Pp3c15_5850 Physcomitrium patens HOM05D006092 ORTHO05D007508 3.2e-63 245.4 168 78.0
Mapoly0038s0054 Marchantia polymorpha HOM05D006092 ORTHO05D007508 6.7e-45 184.5 167 59.9
AagrBONN_evm.TU.Sc2ySwM_228.5128 Anthoceros agrestis HOM05D006092 ORTHO05D007508 2.7e-38 162.5 107 72.9
FvH4_3g41620 Fragaria vesca HOM05D006092 ORTHO05D007508 6.1e-38 161.4 159 52.8
FAN11G0712 Fragaria x ananassa HOM05D006092 ORTHO05D007508 6.1e-38 161.4 159 52.8
RcHm_v2.0_Chr5g0074661 Rosa chinensis HOM05D006092 ORTHO05D007508 3.0e-37 159.1 159 52.2
FAN25G2470 Fragaria x ananassa HOM05D006092 ORTHO05D007508 5.1e-37 158.3 159 52.2
Prupe.6G035200 Prunus persica HOM05D006092 ORTHO05D007508 8.8e-37 157.5 166 51.2
ECA246G4981 Erigeron canadensis HOM05D006092 ORTHO05D007508 5.7e-36 154.8 138 58.0
CANSAT11G0425 Cannabis sativa HOM05D006092 ORTHO05D007508 1.7e-35 153.3 149 50.3
CBR_g28070 Chara braunii HOM05D006092 ORTHO05D007508 3.7e-35 152.1 167 53.9
Rhsim04G0007400 Rhododendron simsii HOM05D006092 ORTHO05D007508 4.8e-35 151.8 114 60.5
Ciclev10009769m.g Citrus clementina HOM05D006092 ORTHO05D007508 8.2e-35 151.0 157 52.9
MBI14_g12737_MAGBIO Magnolia biondii HOM05D006092 ORTHO05D007508 1.1e-34 150.6 147 53.7
MD03G1042800 Malus domestica HOM05D006092 ORTHO05D007508 1.1e-34 150.6 163 50.9
SEGI_13197 Sequoiadendron giganteum HOM05D006092 ORTHO05D007508 1.1e-34 150.6 166 50.0
Lj3g0000125 Lotus japonicus HOM05D006092 ORTHO05D007508 1.4e-34 150.2 167 49.7
Manes.01G006400 Manihot esculenta HOM05D006092 ORTHO05D007508 1.4e-34 150.2 156 51.9
ATR0751G135 Amborella trichopoda HOM05D006092 ORTHO05D007508 1.8e-34 149.8 135 54.8
CDE05G1532 Ceratophyllum demersum HOM05D006092 ORTHO05D007508 1.8e-34 149.8 135 55.6
HPP92_022812 Vanilla planifolia HOM05D006092 ORTHO05D007508 1.8e-34 149.8 134 55.2
HanXRQChr05g0160351 Helianthus annuus HOM05D006092 ORTHO05D007508 2.4e-34 149.4 101 65.3
MBI15_g47073_MAGBIO Magnolia biondii HOM05D006092 ORTHO05D007508 2.4e-34 149.4 139 55.4
Nitab4.5_0000611g0120 Nicotiana tabacum HOM05D006092 ORTHO05D007508 3.1e-34 149.1 138 54.3
TPR.G16714 Trifolium pratense HOM05D006092 ORTHO05D007508 3.1e-34 149.1 133 54.9
TWI39G1159 Tripterygium wilfordii HOM05D006092 ORTHO05D007508 3.1e-34 149.1 160 50.0
MBI15_g47946_MAGBIO Magnolia biondii HOM05D006092 ORTHO05D007508 5.3e-34 148.3 138 54.3
TWI38G1372 Tripterygium wilfordii HOM05D006092 ORTHO05D007508 5.3e-34 148.3 135 54.1
CDE11G0224 Ceratophyllum demersum HOM05D006092 ORTHO05D007508 6.9e-34 147.9 135 54.8
Nitab4.5_0000611g0110 Nicotiana tabacum HOM05D006092 ORTHO05D007508 6.9e-34 147.9 138 54.3
SMO353G0046 Selaginella moellendorffii HOM05D006092 ORTHO05D007508 6.9e-34 147.9 116 59.5
THA.LOC104810303 Tarenaya hassleriana HOM05D006092 ORTHO05D007508 6.9e-34 147.9 154 51.9
GSVIVG01014842001 Vitis vinifera HOM05D006092 ORTHO05D007508 6.9e-34 147.9 137 51.8
HanXRQChr08g0232881 Helianthus annuus HOM05D006092 ORTHO05D007508 9.1e-34 147.5 101 64.4
Nn1g07635 Nelumbo nucifera HOM05D006092 ORTHO05D007508 9.1e-34 147.5 140 52.1
Nitab4.5_0001622g0160 Nicotiana tabacum HOM05D006092 ORTHO05D007508 9.1e-34 147.5 136 53.7
arahy.Tifrunner.gnm1.ann1.4PD0PP Arachis hypogaea HOM05D006092 ORTHO05D007508 2.0e-33 146.4 166 48.8
Lj8P183T26 Lonicera japonica HOM05D006092 ORTHO05D007508 2.6e-33 146.0 101 64.4
Psat5g231800 Pisum sativum HOM05D006092 ORTHO05D007508 2.6e-33 146.0 166 47.0
THA.LOC104822703 Tarenaya hassleriana HOM05D006092 ORTHO05D007508 2.6e-33 146.0 157 50.3
unitig_37.g11908 Utricularia gibba HOM05D006092 ORTHO05D007508 4.5e-33 145.2 134 52.2
unitig_92.g28271 Utricularia gibba HOM05D006092 ORTHO05D007508 5.9e-33 144.8 101 63.4
VMungo1080G0991 Vigna mungo HOM05D006092 ORTHO05D007508 5.9e-33 144.8 165 48.5
Haze_09914 Corylus avellana HOM05D006092 ORTHO05D007508 1.0e-32 144.1 166 48.8
Thhalv10011835m.g Eutrema salsugineum HOM05D006092 ORTHO05D007508 1.0e-32 144.1 147 51.0
Glyma.06G321900 Glycine max HOM05D006092 ORTHO05D007508 1.0e-32 144.1 135 54.1
Phvul.005G004000 Phaseolus vulgaris HOM05D006092 ORTHO05D007508 1.0e-32 144.1 165 48.5
Sabra16G0320400 Salix brachista HOM05D006092 ORTHO05D007508 1.0e-32 144.1 131 56.5
Lsat_1_v5_gn_5_381 Lactuca sativa HOM05D006092 ORTHO05D007508 1.3e-32 143.7 96 64.6
Lalb_Chr18g0048631 Lupinus albus HOM05D006092 ORTHO05D007508 1.3e-32 143.7 163 50.3
MELO3C014124.2 Cucumis melo HOM05D006092 ORTHO05D007508 1.7e-32 143.3 163 49.7
AL1G63740 Arabidopsis lyrata HOM05D006092 ORTHO05D007508 2.2e-32 142.9 146 49.3
Migut.M01583 Erythranthe guttata HOM05D006092 ORTHO05D007508 2.2e-32 142.9 138 52.2
CARHR087970 Cardamine hirsuta HOM05D006092 ORTHO05D007508 2.9e-32 142.5 132 50.8
Glyma.04G112800 Glycine max HOM05D006092 ORTHO05D007508 3.8e-32 142.1 165 47.3
Thecc.07G001800 Theobroma cacao HOM05D006092 ORTHO05D007508 3.8e-32 142.1 161 47.8
Atru.chr2.3894 Acer truncatum HOM05D006092 ORTHO05D007508 5.0e-32 141.7 165 48.5
Aa31LG10G560 Aethionema arabicum HOM05D006092 ORTHO05D007508 5.0e-32 141.7 146 50.7
AT1G55670 Arabidopsis thaliana HOM05D006092 ORTHO05D007508 5.0e-32 141.7 146 50.7
Aqoxy4G02265 Aquilegia oxysepala HOM05D006092 ORTHO05D007508 6.5e-32 141.4 157 47.8
CARHR045350 Cardamine hirsuta HOM05D006092 ORTHO05D007508 8.5e-32 141.0 146 49.3
EL10Ac3g07451 Beta vulgaris HOM05D006092 ORTHO05D007508 1.1e-31 140.6 165 48.5
Potri.001G471900 Populus trichocarpa HOM05D006092 ORTHO05D007508 1.4e-31 140.2 131 55.0
Potri.011G168700 Populus trichocarpa HOM05D006092 ORTHO05D007508 1.9e-31 139.8 131 53.4
Sabra11G0138000 Salix brachista HOM05D006092 ORTHO05D007508 1.9e-31 139.8 131 53.4
Cpa.g.sc12.69 Carica papaya HOM05D006092 ORTHO05D007508 3.2e-31 139.0 135 51.9
Gorai.013G148000 Gossypium raimondii HOM05D006092 ORTHO05D007508 3.2e-31 139.0 166 48.8
Gohir.D13G132000 Gossypium hirsutum HOM05D006092 ORTHO05D007508 4.2e-31 138.7 166 48.2
Oeu013004.1 Olea europaea HOM05D006092 ORTHO05D007508 4.2e-31 138.7 139 51.1
AUR62018553 Chenopodium quinoa HOM05D006092 ORTHO05D007508 5.5e-31 138.3 103 62.1
AUR62020866 Chenopodium quinoa HOM05D006092 ORTHO05D007508 5.5e-31 138.3 103 62.1
SalBow8G3834 Salvia bowleyana HOM05D006092 ORTHO05D007508 5.5e-31 138.3 137 51.8
Sc07g0002210 Simmondsia chinensis HOM05D006092 ORTHO05D007508 5.5e-31 138.3 111 58.6
SGA_v2.0_scaffold186G40234 Striga asiatica HOM05D006092 ORTHO05D007508 5.5e-31 138.3 142 50.7
QL08p000538 Quercus lobata HOM05D006092 ORTHO05D007508 7.2e-31 137.9 167 47.3
ClCG10G004510 Citrullus lanatus HOM05D006092 ORTHO05D007508 9.4e-31 137.5 164 47.6
Gohir.A04G001100 Gossypium hirsutum HOM05D006092 ORTHO05D007508 9.4e-31 137.5 160 47.5
Cfa016959 Carpinus fangiana HOM05D006092 ORTHO05D007508 1.2e-30 137.1 168 45.8
Gohir.A13G128600 Gossypium hirsutum HOM05D006092 ORTHO05D007508 1.2e-30 137.1 166 48.2
Oeu006265.1 Olea europaea HOM05D006092 ORTHO05D007508 1.2e-30 137.1 139 51.8
Ah.04g149440 Amaranthus hybridus HOM05D006092 ORTHO05D007508 1.6e-30 136.7 163 47.2
BcaB02g10807 Brassica carinata HOM05D006092 ORTHO05D007508 1.6e-30 136.7 147 49.7
PSO063G2976 Papaver somniferum HOM05D006092 ORTHO05D007508 1.6e-30 136.7 137 51.1
PSO782G4285 Papaver somniferum HOM05D006092 ORTHO05D007508 1.6e-30 136.7 137 51.1
Carub.0001s4419 Capsella rubella HOM05D006092 ORTHO05D007508 2.1e-30 136.3 146 47.9
CsaV3_3G004330 Cucumis sativus L. HOM05D006092 ORTHO05D007508 2.1e-30 136.3 164 47.0
COL.COLO4_07787 Corchorus olitorius HOM05D006092 ORTHO05D007508 2.7e-30 136.0 98 62.2
Zm00001eb316290 Zea mays HOM05D006092 ORTHO05D007508 2.7e-30 136.0 113 58.4
PGR031G3987 Punica granatum HOM05D006092 ORTHO05D007508 3.6e-30 135.6 162 46.3
BcaC08g44210 Brassica carinata HOM05D006092 ORTHO05D007508 4.7e-30 135.2 135 49.6
C06p16180 Brassica napus HOM05D006092 ORTHO05D007508 4.7e-30 135.2 135 49.6
BolC6t36815H Brassica oleracea HOM05D006092 ORTHO05D007508 4.7e-30 135.2 135 49.6
CAN.G623.73 Capsicum annuum HOM05D006092 ORTHO05D007508 6.1e-30 134.8 147 49.0
Sed0026101 Sechium edule HOM05D006092 ORTHO05D007508 6.1e-30 134.8 135 50.4
BcaB04g16937 Brassica carinata HOM05D006092 ORTHO05D007508 7.9e-30 134.4 146 46.6
BcaC01g01548 Brassica carinata HOM05D006092 ORTHO05D007508 1.0e-29 134.0 135 49.6
BcaC08g43644 Brassica carinata HOM05D006092 ORTHO05D007508 1.0e-29 134.0 135 49.6
A05p17350 Brassica napus HOM05D006092 ORTHO05D007508 1.0e-29 134.0 135 49.6
C03p93010 Brassica napus HOM05D006092 ORTHO05D007508 1.0e-29 134.0 135 49.6
C06p10630 Brassica napus HOM05D006092 ORTHO05D007508 1.0e-29 134.0 135 49.6
BolC3t21605H Brassica oleracea HOM05D006092 ORTHO05D007508 1.0e-29 134.0 135 49.6
BolC6t36143H Brassica oleracea HOM05D006092 ORTHO05D007508 1.0e-29 134.0 135 49.6
BraA05t20631Z Brassica rapa HOM05D006092 ORTHO05D007508 1.0e-29 134.0 135 49.6
Gorai.009G454900 Gossypium raimondii HOM05D006092 ORTHO05D007508 1.0e-29 134.0 165 44.8
Os09g0481200 Oryza sativa ssp. japonica HOM05D006092 ORTHO05D007508 1.0e-29 134.0 156 48.7
Zm00001eb101660 Zea mays HOM05D006092 ORTHO05D007508 1.0e-29 134.0 98 63.3
A06p00060 Brassica napus HOM05D006092 ORTHO05D007508 1.4e-29 133.7 135 49.6
BraA06t23221Z Brassica rapa HOM05D006092 ORTHO05D007508 1.4e-29 133.7 135 49.6
PGSC0003DMG400022249 Solanum tuberosum HOM05D006092 ORTHO05D007508 1.4e-29 133.7 136 48.5
Sopen07g034330 Solanum pennellii HOM05D006092 ORTHO05D007508 1.8e-29 133.3 136 48.5
A08p00380 Brassica napus HOM05D006092 ORTHO05D007508 2.3e-29 132.9 161 46.6
BraA08t32097Z Brassica rapa HOM05D006092 ORTHO05D007508 2.3e-29 132.9 161 46.6
Eucgr.F03646 Eucalyptus grandis HOM05D006092 ORTHO05D007508 2.3e-29 132.9 166 43.4
Solyc07g066150.1 Solanum lycopersicum HOM05D006092 ORTHO05D007508 3.0e-29 132.5 136 48.5
Nitab4.5_0000611g0130 Nicotiana tabacum HOM05D006092 ORTHO05D007508 2.0e-28 129.8 133 50.4
BcaB07g33193 Brassica carinata HOM05D006092 ORTHO05D007508 3.3e-28 129.0 166 44.0
Sed0012341 Sechium edule HOM05D006092 ORTHO05D007508 3.3e-28 129.0 145 47.6
Medtr3g010000 Medicago truncatula HOM05D006092 ORTHO05D007508 9.7e-28 127.5 81 67.9
Dinv40914 Davidia involucrata HOM05D006092 ORTHO05D007508 2.0e-25 119.8 79 64.6
CiPaw.11G210500 Carya illinoinensis HOM05D006092 ORTHO05D007508 2.2e-19 99.8 137 48.9
TAR627G0509 Trochodendron aralioides HOM05D006092 ORTHO05D007508 3.7e-19 99.0 71 59.2
PRCOL_00006984 Prasinoderma coloniale HOM05D006092 ORTHO05D007508 1.1e-18 97.4 89 51.7
MCO01G478 Micromonas commoda HOM05D006092 ORTHO05D007508 9.1e-18 94.4 98 48.0
Sp1g41280 Schrenkiella parvula HOM05D006092 ORTHO05D007508 3.2e-15 85.9 146 37.0
Cre12.g560950 Chlamydomonas reinhardtii HOM05D006092 ORTHO05D007508 6.3e-11 71.6 120 38.3
EL10As5g23536 Beta vulgaris HOM05D006092 ORTHO05D007508 2.0e-09 66.6 56 58.9
PGSC0003DMG400006702 Solanum tuberosum HOM05D006092 ORTHO05D007508 3.5e-09 65.9 111 36.9
EL10Ac3g06625 Beta vulgaris HOM05D006092 ORTHO05D007508 1.0e-08 64.3 54 59.3
EL10Ac5g10941 Beta vulgaris HOM05D006092 ORTHO05D007508 1.0e-08 64.3 54 59.3


User provided reference genes

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