Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c9_14770 Physcomitrium patens HOM05D007356 ORTHO05D009247 0.0e+00 1527.7 783 100.0
Pp3c15_5150 Physcomitrium patens HOM05D007356 ORTHO05D009247 1.2e-64 252.3 198 65.7
Mapoly0080s0048 Marchantia polymorpha HOM05D007356 ORTHO05D009247 5.3e-60 236.9 890 30.2
AagrBONN_evm.TU.Sc2ySwM_344.3211 Anthoceros agrestis HOM05D007356 ORTHO05D009247 4.8e-45 187.2 865 28.4
SEGI_12886 Sequoiadendron giganteum HOM05D007356 ORTHO05D009247 2.2e-21 108.6 217 35.0
SMO145G0090 Selaginella moellendorffii HOM05D007356 ORTHO05D009247 1.9e-20 105.5 299 33.1
CDE02G0316 Ceratophyllum demersum HOM05D007356 ORTHO05D009247 2.3e-18 98.6 161 36.0
CDE08G0776 Ceratophyllum demersum HOM05D007356 ORTHO05D009247 5.0e-18 97.4 280 27.5
ATR0681G386 Amborella trichopoda HOM05D007356 ORTHO05D009247 5.6e-17 94.0 165 38.2
MBI16_g25107_MAGBIO Magnolia biondii HOM05D007356 ORTHO05D009247 2.0e-14 85.5 170 32.9
Nn4g23745 Nelumbo nucifera HOM05D007356 ORTHO05D009247 2.2e-13 82.0 165 37.6
Potri.017G112500 Populus trichocarpa HOM05D007356 ORTHO05D009247 8.3e-13 80.1 145 35.9
TAR374G1737 Trochodendron aralioides HOM05D007356 ORTHO05D009247 1.1e-12 79.7 165 36.4
Phvul.004G062800 Phaseolus vulgaris HOM05D007356 ORTHO05D009247 1.9e-12 79.0 186 30.1
Rhsim10G0063400 Rhododendron simsii HOM05D007356 ORTHO05D009247 1.9e-12 79.0 187 31.6
Nitab4.5_0008781g0020 Nicotiana tabacum HOM05D007356 ORTHO05D009247 3.2e-12 78.2 192 32.3
Sabra17G0093200 Salix brachista HOM05D007356 ORTHO05D009247 3.2e-12 78.2 202 33.2
Nitab4.5_0004118g0090 Nicotiana tabacum HOM05D007356 ORTHO05D009247 5.4e-12 77.4 192 32.3
PSO782G4491 Papaver somniferum HOM05D007356 ORTHO05D009247 5.4e-12 77.4 165 33.9
Dinv34849 Davidia involucrata HOM05D007356 ORTHO05D009247 7.0e-12 77.0 165 33.9
Cpa.g.sc179.26 Carica papaya HOM05D007356 ORTHO05D009247 9.2e-12 76.6 132 35.6
Haze_14128 Corylus avellana HOM05D007356 ORTHO05D009247 9.2e-12 76.6 168 34.5
vmacro05573 Vaccinium macrocarpon HOM05D007356 ORTHO05D009247 9.2e-12 76.6 117 38.5
PGSC0003DMG400012678 Solanum tuberosum HOM05D007356 ORTHO05D009247 1.2e-11 76.3 192 34.4
Actinidia18124 Actinidia chinensis HOM05D007356 ORTHO05D009247 2.1e-11 75.5 208 30.8
Potri.004G102400 Populus trichocarpa HOM05D007356 ORTHO05D009247 2.1e-11 75.5 110 40.9
Hma1.2p1_0136F.1_g062070 Hydrangea macrophylla HOM05D007356 ORTHO05D009247 2.7e-11 75.1 164 31.7
PSO063G7355 Papaver somniferum HOM05D007356 ORTHO05D009247 2.7e-11 75.1 165 33.3
Cfa007946 Carpinus fangiana HOM05D007356 ORTHO05D009247 3.5e-11 74.7 164 33.5
Glyma.13G047100 Glycine max HOM05D007356 ORTHO05D009247 3.5e-11 74.7 175 31.4
CSS0016710 Camellia sinensis var. sinensis HOM05D007356 ORTHO05D009247 4.6e-11 74.3 164 32.3
Lj2g0005002 Lotus japonicus HOM05D007356 ORTHO05D009247 4.6e-11 74.3 206 29.1
Prupe.3G239800 Prunus persica HOM05D007356 ORTHO05D009247 6.0e-11 73.9 165 33.3
Sed0002469 Sechium edule HOM05D007356 ORTHO05D009247 1.0e-10 73.2 191 31.9
GSVIVG01036444001 Vitis vinifera HOM05D007356 ORTHO05D009247 1.3e-10 72.8 210 27.1
FAN14G2396 Fragaria x ananassa HOM05D007356 ORTHO05D009247 1.7e-10 72.4 170 34.1
Peaxi162Scf01327g00135 Petunia axillaris HOM05D007356 ORTHO05D009247 1.7e-10 72.4 164 32.9
VMungo0464G1268 Vigna mungo HOM05D007356 ORTHO05D009247 1.7e-10 72.4 186 29.0
Cc07_g09030 Coffea canephora HOM05D007356 ORTHO05D009247 2.3e-10 72.0 164 31.7
FvH4_6g45360 Fragaria vesca HOM05D007356 ORTHO05D009247 2.3e-10 72.0 170 36.5
Thecc.04G137600 Theobroma cacao HOM05D007356 ORTHO05D009247 2.3e-10 72.0 104 37.5
COL.COLO4_16192 Corchorus olitorius HOM05D007356 ORTHO05D009247 5.1e-10 70.9 104 39.4
QL02p052579 Quercus lobata HOM05D007356 ORTHO05D009247 5.1e-10 70.9 182 32.4
Sopen02g030430 Solanum pennellii HOM05D007356 ORTHO05D009247 1.1e-09 69.7 192 32.3
Psat1g012920 Pisum sativum HOM05D007356 ORTHO05D009247 1.5e-09 69.3 134 36.6
Aqoxy3G03920 Aquilegia oxysepala HOM05D007356 ORTHO05D009247 1.9e-09 68.9 104 38.5
Ciclev10011716m.g Citrus clementina HOM05D007356 ORTHO05D009247 2.5e-09 68.6 104 36.5
Lsat_1_v5_gn_4_153101 Lactuca sativa HOM05D007356 ORTHO05D009247 2.5e-09 68.6 100 44.0
Manes.01G108100 Manihot esculenta HOM05D007356 ORTHO05D009247 2.5e-09 68.6 165 32.1
Ah.16g101940 Amaranthus hybridus HOM05D007356 ORTHO05D009247 3.3e-09 68.2 165 30.9
Eucgr.J01469 Eucalyptus grandis HOM05D007356 ORTHO05D009247 4.3e-09 67.8 103 37.9
MD09G1084700 Malus domestica HOM05D007356 ORTHO05D009247 4.3e-09 67.8 227 28.6
MD17G1074100 Malus domestica HOM05D007356 ORTHO05D009247 4.3e-09 67.8 242 28.5
Solyc02g085740.4 Solanum lycopersicum HOM05D007356 ORTHO05D009247 5.6e-09 67.4 192 32.3
SGA_v2.0_scaffold33G13428 Striga asiatica HOM05D007356 ORTHO05D009247 5.6e-09 67.4 123 37.4
THA.LOC104820954 Tarenaya hassleriana HOM05D007356 ORTHO05D009247 5.6e-09 67.4 175 29.7
CsaV3_3G020350 Cucumis sativus L. HOM05D007356 ORTHO05D009247 7.3e-09 67.0 200 25.0
Aa31LG5G12990 Aethionema arabicum HOM05D007356 ORTHO05D009247 9.5e-09 66.6 167 30.5
CANSAT64G1351 Cannabis sativa HOM05D007356 ORTHO05D009247 9.5e-09 66.6 161 32.3
TPR.G32461 Trifolium pratense HOM05D007356 ORTHO05D009247 9.5e-09 66.6 104 38.5
Atru.chr8.830 Acer truncatum HOM05D007356 ORTHO05D009247 1.2e-08 66.2 104 34.6
ClCG05G012060 Citrullus lanatus HOM05D007356 ORTHO05D009247 1.2e-08 66.2 163 32.5
arahy.Tifrunner.gnm1.ann1.33CL05 Arachis hypogaea HOM05D007356 ORTHO05D009247 1.6e-08 65.9 104 35.6
Lalb_Chr06g0174681 Lupinus albus HOM05D007356 ORTHO05D009247 2.1e-08 65.5 132 32.6
arahy.Tifrunner.gnm1.ann1.3VIJ8X Arachis hypogaea HOM05D007356 ORTHO05D009247 2.8e-08 65.1 104 35.6
Migut.H00199 Erythranthe guttata HOM05D007356 ORTHO05D009247 2.8e-08 65.1 138 31.2
Oeu030757.2 Olea europaea HOM05D007356 ORTHO05D009247 2.8e-08 65.1 100 39.0
CBR_g44341 Chara braunii HOM05D007356 ORTHO05D009247 3.6e-08 64.7 114 32.5
Hund13734 Selenicereus undatus HOM05D007356 ORTHO05D009247 3.6e-08 64.7 172 30.2
AUR62008964 Chenopodium quinoa HOM05D007356 ORTHO05D009247 4.7e-08 64.3 104 37.5
MELO3C023764.2 Cucumis melo HOM05D007356 ORTHO05D009247 4.7e-08 64.3 128 32.8
Duzib133G0592 Durio zibethinus HOM05D007356 ORTHO05D009247 4.7e-08 64.3 167 30.5
Medtr6g017235 Medicago truncatula HOM05D007356 ORTHO05D009247 4.7e-08 64.3 117 34.2
AUR62014539 Chenopodium quinoa HOM05D007356 ORTHO05D009247 6.2e-08 63.9 104 37.5
Sed0015927 Sechium edule HOM05D007356 ORTHO05D009247 6.2e-08 63.9 200 27.0
Os01g0694200 Oryza sativa ssp. japonica HOM05D007356 ORTHO05D009247 8.1e-08 63.5 217 25.3
Gohir.A11G162300 Gossypium hirsutum HOM05D007356 ORTHO05D009247 1.4e-07 62.8 167 31.1
DCAR_017218 Daucus carota HOM05D007356 ORTHO05D009247 2.3e-07 62.0 184 30.4
HanXRQChr14g0438671 Helianthus annuus HOM05D007356 ORTHO05D009247 2.3e-07 62.0 100 42.0
ECA232G5000 Erigeron canadensis HOM05D007356 ORTHO05D009247 5.2e-07 60.8 100 42.0
Gorai.007G180100 Gossypium raimondii HOM05D007356 ORTHO05D009247 1.5e-06 59.3 167 31.7
Zm00001eb155990 Zea mays HOM05D007356 ORTHO05D009247 2.0e-06 58.9 166 29.5
TWI31G0521 Tripterygium wilfordii HOM05D007356 ORTHO05D009247 3.4e-06 58.2 166 33.1
EL10Ac2g04607 Beta vulgaris HOM05D007356 ORTHO05D009247 4.4e-06 57.8 166 29.5
TWI79G1397 Tripterygium wilfordii HOM05D007356 ORTHO05D009247 7.5e-06 57.0 166 32.5
CARHR076490 Cardamine hirsuta HOM05D007356 ORTHO05D009247 9.9e-06 56.6 170 27.6
Gohir.D11G168600 Gossypium hirsutum HOM05D007356 ORTHO05D009247 9.9e-06 56.6 167 31.1
unitig_60.g25515 Utricularia gibba HOM05D007356 ORTHO05D009247 9.9e-06 56.6 179 27.9


User provided reference genes

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