Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c9_11540 Physcomitrium patens HOM05D006424 ORTHO05D007945 1.5e-169 599.4 290 100.0
Pp3c22_2660 Physcomitrium patens HOM05D006424 ORTHO05D007945 4.6e-102 375.2 242 71.5
Pp3c15_11500 Physcomitrium patens HOM05D006424 ORTHO05D007945 8.7e-101 370.9 271 69.7
Mapoly0024s0088 Marchantia polymorpha HOM05D006424 ORTHO05D007945 3.0e-93 345.9 231 68.4
AagrBONN_evm.TU.Sc2ySwM_344.5484 Anthoceros agrestis HOM05D006424 ORTHO05D007945 1.3e-83 313.9 284 54.6
Ca_20445_v3 Cicer arietinum L. HOM05D006424 ORTHO05D007945 1.8e-77 293.5 209 60.8
Actinidia08796 Actinidia chinensis HOM05D006424 ORTHO05D007945 6.7e-77 291.6 295 51.9
CBR_g38381 Chara braunii HOM05D006424 ORTHO05D007945 2.0e-76 290.0 209 59.8
SMO331G0083 Selaginella moellendorffii HOM05D006424 ORTHO05D007945 2.0e-76 290.0 215 60.0
Actinidia15982 Actinidia chinensis HOM05D006424 ORTHO05D007945 5.7e-76 288.5 263 53.6
Hma1.2p1_0042F.1_g025600 Hydrangea macrophylla HOM05D006424 ORTHO05D007945 2.2e-75 286.6 230 56.1
Gorai.010G225400 Gossypium raimondii HOM05D006424 ORTHO05D007945 1.4e-74 283.9 253 52.6
Lj9A500T81 Lonicera japonica HOM05D006424 ORTHO05D007945 1.4e-74 283.9 237 52.7
Medtr4g010140 Medicago truncatula HOM05D006424 ORTHO05D007945 1.4e-74 283.9 209 57.4
TPR.G38617 Trifolium pratense HOM05D001630 ORTHO05D007945 1.4e-74 283.9 228 53.9
Lalb_Chr04g0262371 Lupinus albus HOM05D006424 ORTHO05D007945 1.8e-74 283.5 228 53.5
FAN14G0356 Fragaria x ananassa HOM05D006424 ORTHO05D007945 2.4e-74 283.1 255 52.2
Manes.11G056800 Manihot esculenta HOM05D006424 ORTHO05D007945 2.4e-74 283.1 254 52.8
Aqoxy7G03662 Aquilegia oxysepala HOM05D006424 ORTHO05D007945 3.1e-74 282.7 210 59.0
AUR62016338 Chenopodium quinoa HOM05D006424 ORTHO05D007945 1.6e-73 280.4 257 51.8
FAN05G3690 Fragaria x ananassa HOM05D006424 ORTHO05D007945 1.6e-73 280.4 268 49.3
Rhsim12G0191200 Rhododendron simsii HOM05D006424 ORTHO05D007945 1.6e-73 280.4 234 54.3
PGR102G1391 Punica granatum HOM05D006424 ORTHO05D007945 2.0e-73 280.0 289 46.4
Eucgr.F03876 Eucalyptus grandis HOM05D006424 ORTHO05D007945 2.7e-73 279.6 284 47.5
Gohir.A06G185600 Gossypium hirsutum HOM05D006424 ORTHO05D007945 2.7e-73 279.6 235 54.0
Nn2g12084 Nelumbo nucifera HOM05D006424 ORTHO05D007945 2.7e-73 279.6 215 57.7
Ah.01g020600 Amaranthus hybridus HOM05D006424 ORTHO05D007945 3.5e-73 279.3 208 57.2
CSS0015595 Camellia sinensis var. sinensis HOM05D006424 ORTHO05D007945 3.5e-73 279.3 289 48.4
GSVIVG01017340001 Vitis vinifera HOM05D006424 ORTHO05D007945 3.5e-73 279.3 260 51.5
ATR0322G065 Amborella trichopoda HOM05D006424 ORTHO05D007945 5.9e-73 278.5 229 55.9
Gohir.D06G192200 Gossypium hirsutum HOM05D006424 ORTHO05D007945 5.9e-73 278.5 235 53.6
Nitab4.5_0009497g0010 Nicotiana tabacum HOM05D006424 ORTHO05D007945 5.9e-73 278.5 229 54.1
PSO210G3245 Papaver somniferum HOM05D006424 ORTHO05D007945 5.9e-73 278.5 230 54.8
Oeu039429.1 Olea europaea HOM05D006424 ORTHO05D007945 7.7e-73 278.1 203 59.6
RcHm_v2.0_Chr2g0135411 Rosa chinensis HOM05D006424 ORTHO05D007945 1.0e-72 277.7 268 49.3
DCAR_021344 Daucus carota HOM05D006424 ORTHO05D007945 1.3e-72 277.3 208 57.7
ECA247G2617 Erigeron canadensis HOM05D006424 ORTHO05D007945 1.3e-72 277.3 235 54.0
Prupe.3G087300 Prunus persica HOM05D006424 ORTHO05D007945 1.3e-72 277.3 257 52.1
PSO210G5365 Papaver somniferum HOM05D006424 ORTHO05D007945 2.2e-72 276.6 230 54.3
BcaC05g28929 Brassica carinata HOM05D006424 ORTHO05D007945 3.8e-72 275.8 247 51.0
A05p33570 Brassica napus HOM05D006424 ORTHO05D007945 3.8e-72 275.8 247 50.6
C05p50560 Brassica napus HOM05D006424 ORTHO05D007945 3.8e-72 275.8 247 51.0
BolC5t33801H Brassica oleracea HOM05D006424 ORTHO05D007945 3.8e-72 275.8 247 50.6
VMungo0331G1912 Vigna mungo HOM05D006424 ORTHO05D007945 3.8e-72 275.8 225 55.6
Duzib192G0907 Durio zibethinus HOM05D006424 ORTHO05D007945 5.0e-72 275.4 230 53.5
FAN02G1519 Fragaria x ananassa HOM05D006424 ORTHO05D007945 6.5e-72 275.0 250 51.6
MSTRG.22746 Avicennia marina HOM05D006424 ORTHO05D007945 8.5e-72 274.6 227 55.1
Cpa.g.sc10.267 Carica papaya HOM05D006424 ORTHO05D007945 8.5e-72 274.6 283 47.7
MBI04_g29330_MAGBIO Magnolia biondii HOM05D006424 ORTHO05D007945 8.5e-72 274.6 279 49.8
Manes.04G112700 Manihot esculenta HOM05D006424 ORTHO05D007945 8.5e-72 274.6 278 49.3
Phvul.010G156300 Phaseolus vulgaris HOM05D006424 ORTHO05D007945 8.5e-72 274.6 233 53.2
BcaB06g25691 Brassica carinata HOM05D006424 ORTHO05D007945 1.1e-71 274.2 247 49.8
HanXRQChr04g0097881 Helianthus annuus HOM05D006424 ORTHO05D007945 1.1e-71 274.2 233 53.2
Nn8g39504 Nelumbo nucifera HOM05D006424 ORTHO05D007945 1.9e-71 273.5 224 54.9
AUR62011520 Chenopodium quinoa HOM05D006424 ORTHO05D007945 2.5e-71 273.1 210 56.2
Lj3g0018478 Lotus japonicus HOM05D006424 ORTHO05D007945 2.5e-71 273.1 254 49.6
QL05p029818 Quercus lobata HOM05D006424 ORTHO05D007945 3.2e-71 272.7 228 52.6
A03p39490 Brassica napus HOM05D006424 ORTHO05D007945 4.2e-71 272.3 214 54.7
COL.COLO4_11949 Corchorus olitorius HOM05D006424 ORTHO05D007945 4.2e-71 272.3 236 52.1
MD17G1212100 Malus domestica HOM05D006424 ORTHO05D007945 4.2e-71 272.3 250 52.8
Atru.chr1.2950 Acer truncatum HOM05D006424 ORTHO05D007945 5.5e-71 271.9 283 47.7
CSS0035863 Camellia sinensis var. sinensis HOM05D006424 ORTHO05D007945 5.5e-71 271.9 250 51.6
THA.LOC104810510 Tarenaya hassleriana HOM05D006424 ORTHO05D007945 5.5e-71 271.9 290 46.9
Thecc.06G024200 Theobroma cacao HOM05D006424 ORTHO05D007945 5.5e-71 271.9 275 46.9
CANSAT56G3050 Cannabis sativa HOM05D006424 ORTHO05D007945 7.2e-71 271.6 253 49.8
Cc04_g04390 Coffea canephora HOM05D006424 ORTHO05D007945 7.2e-71 271.6 210 55.7
C03p47890 Brassica napus HOM05D006424 ORTHO05D007945 9.4e-71 271.2 214 54.7
unitig_27.g24949 Utricularia gibba HOM05D006424 ORTHO05D007945 9.4e-71 271.2 202 57.9
CiPaw.01G248200 Carya illinoinensis HOM05D006424 ORTHO05D007945 1.2e-70 270.8 247 50.6
Sp3g14150 Schrenkiella parvula HOM05D006424 ORTHO05D007945 1.2e-70 270.8 214 55.1
PGSC0003DMG402028626 Solanum tuberosum HOM05D006424 ORTHO05D007945 1.2e-70 270.8 258 47.7
Carub.0003s1558 Capsella rubella HOM05D006424 ORTHO05D007945 1.6e-70 270.4 247 50.2
CARHR090930 Cardamine hirsuta HOM05D006424 ORTHO05D007945 1.6e-70 270.4 214 54.7
Ciclev10026222m.g Citrus clementina HOM05D006424 ORTHO05D007945 1.6e-70 270.4 287 46.7
Migut.I00764 Erythranthe guttata HOM05D006424 ORTHO05D007945 2.1e-70 270.0 250 49.6
Glyma.07G029900 Glycine max HOM05D006424 ORTHO05D007945 2.1e-70 270.0 251 50.2
Glyma.08G213000 Glycine max HOM05D006424 ORTHO05D007945 2.1e-70 270.0 253 49.8
vmacro16897 Vaccinium macrocarpon HOM05D006424 ORTHO05D007945 2.1e-70 270.0 206 58.7
BraA05t22180Z Brassica rapa HOM05D006424 ORTHO05D007945 2.7e-70 269.6 247 49.4
CAN.G47.13 Capsicum annuum HOM05D006424 ORTHO05D007945 2.7e-70 269.6 208 54.3
Sopen12g021950 Solanum pennellii HOM05D006424 ORTHO05D007945 2.7e-70 269.6 256 48.4
TAR383G1051 Trochodendron aralioides HOM05D006424 ORTHO05D007945 3.6e-70 269.2 259 50.2
CiPaw.02G157300 Carya illinoinensis HOM05D006424 ORTHO05D007945 6.1e-70 268.5 219 53.4
Sed0012965 Sechium edule HOM05D006424 ORTHO05D007945 6.1e-70 268.5 210 55.7
Solyc12g042770.3 Solanum lycopersicum HOM05D006424 ORTHO05D007945 6.1e-70 268.5 256 48.4
Thhalv10022443m.g Eutrema salsugineum HOM05D006424 ORTHO05D007945 1.0e-69 267.7 278 46.0
AT3G15840 Arabidopsis thaliana HOM05D006424 ORTHO05D007945 1.4e-69 267.3 214 54.7
Peaxi162Scf00034g01413 Petunia axillaris HOM05D006424 ORTHO05D007945 1.8e-69 266.9 262 47.7
Aa31LG8G3030 Aethionema arabicum HOM05D006424 ORTHO05D007945 4.0e-69 265.8 247 49.0
AL3G28500 Arabidopsis lyrata HOM05D006424 ORTHO05D007945 4.0e-69 265.8 222 52.7
Cfa001961 Carpinus fangiana HOM05D006424 ORTHO05D007945 4.0e-69 265.8 255 49.8
TWI12G0141 Tripterygium wilfordii HOM05D006424 ORTHO05D007945 4.0e-69 265.8 219 54.3
BcaC01g03854 Brassica carinata HOM05D006424 ORTHO05D007945 5.2e-69 265.4 197 57.4
BraA03t13099Z Brassica rapa HOM05D006424 ORTHO05D007945 5.2e-69 265.4 214 53.7
Potri.001G204300 Populus trichocarpa HOM05D006424 ORTHO05D007945 5.2e-69 265.4 253 49.4
CDE07G1654 Ceratophyllum demersum HOM05D006424 ORTHO05D007945 6.8e-69 265.0 217 55.3
MELO3C023426.2 Cucumis melo HOM05D006424 ORTHO05D007945 1.5e-68 263.8 274 45.6
Lsat_1_v5_gn_1_34401 Lactuca sativa HOM05D006424 ORTHO05D007945 3.4e-68 262.7 204 55.9
ClCG09G002940 Citrullus lanatus HOM05D006424 ORTHO05D007945 5.7e-68 261.9 276 45.7
FvH4_6g29710 Fragaria vesca HOM05D006424 ORTHO05D007945 1.3e-67 260.8 195 57.9
CsaV3_7G032330 Cucumis sativus L. HOM05D006424 ORTHO05D007945 4.8e-67 258.8 208 53.4
BolC3t17067H Brassica oleracea HOM05D006424 ORTHO05D007945 6.3e-67 258.5 240 48.8
Nitab4.5_0003157g0020 Nicotiana tabacum HOM05D006424 ORTHO05D007945 8.3e-67 258.1 229 52.0
Sabra01G0157400 Salix brachista HOM05D006424 ORTHO05D007945 1.8e-66 256.9 202 56.9
Zm00001eb049190 Zea mays HOM05D006424 ORTHO05D007945 1.8e-66 256.9 209 56.0
Os03g0586500 Oryza sativa ssp. japonica HOM05D006424 ORTHO05D007945 3.1e-66 256.1 206 56.8
Zm00001eb219530 Zea mays HOM05D006424 ORTHO05D007945 1.6e-65 253.8 213 56.3
FAN09G3401 Fragaria x ananassa HOM05D006424 ORTHO05D007945 1.3e-64 250.8 251 48.2
Haze_16559 Corylus avellana HOM05D006424 ORTHO05D007945 6.5e-64 248.4 306 41.8
arahy.Tifrunner.gnm1.ann1.92ZGJC Arachis hypogaea HOM05D006424 ORTHO05D007945 7.2e-63 245.0 208 51.4
SalBow2G1302 Salvia bowleyana HOM05D006424 ORTHO05D007945 8.6e-56 221.5 285 41.8
SEGI_16074 Sequoiadendron giganteum HOM05D006424 ORTHO05D007945 1.6e-46 190.7 170 52.4
Thecc.K0004600 Theobroma cacao HOM05D006424 ORTHO05D007945 8.3e-43 178.3 146 54.1
Sed0007474 Sechium edule HOM05D006424 ORTHO05D007945 4.1e-42 176.0 148 52.0
Dinv38123 Davidia involucrata HOM05D006424 ORTHO05D007945 9.2e-42 174.9 133 54.9
Thecc.06G024600 Theobroma cacao HOM05D006424 ORTHO05D007945 3.5e-41 172.9 188 44.7
Hund06560 Selenicereus undatus HOM05D006424 ORTHO05D007945 1.0e-32 144.8 187 39.0
arahy.Tifrunner.gnm1.ann1.7R86JN Arachis hypogaea HOM05D006424 ORTHO05D007945 9.5e-31 138.3 218 34.9
EL10Ac9g21901 Beta vulgaris HOM05D006424 ORTHO05D007945 6.2e-30 135.6 110 55.5
Psat7g257120 Pisum sativum HOM05D006424 ORTHO05D007945 2.6e-28 130.2 110 54.5
QL05p029868 Quercus lobata HOM05D006424 ORTHO05D007945 7.6e-20 102.1 96 45.8
QL05p029832 Quercus lobata HOM05D006424 ORTHO05D007945 1.5e-12 77.8 66 51.5
Oeu000425.1 Olea europaea HOM05D006424 ORTHO05D007945 9.9e-12 75.1 57 52.6
arahy.Tifrunner.gnm1.ann1.YP381G Arachis hypogaea HOM05D006424 ORTHO05D007945 2.1e-06 57.4 47 51.1


User provided reference genes

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