Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c8_900 Physcomitrium patens HOM05D004948 ORTHO05D005824 4.5e-98 361.3 187 100.0
Mapoly0143s0028 Marchantia polymorpha HOM05D004948 ORTHO05D005824 4.8e-52 208.4 183 59.6
Atru.chr1.284 Acer truncatum HOM05D004948 ORTHO05D005824 2.1e-47 193.0 183 55.7
AagrBONN_evm.TU.Sc2ySwM_362.1882 Anthoceros agrestis HOM05D004948 ORTHO05D005824 6.1e-47 191.4 179 55.3
MBI07_g20438_MAGBIO Magnolia biondii HOM05D004948 ORTHO05D005824 8.0e-47 191.0 183 56.3
SMO361G0401 Selaginella moellendorffii HOM05D004948 ORTHO05D005824 1.8e-46 189.9 173 58.4
PGR042G1790 Punica granatum HOM05D004948 ORTHO05D005824 2.3e-46 189.5 183 54.6
QL09p011186 Quercus lobata HOM05D004948 ORTHO05D005824 2.3e-46 189.5 182 54.4
vmacro06582 Vaccinium macrocarpon HOM05D004948 ORTHO05D005824 2.3e-46 189.5 183 54.1
CiPaw.06G006800 Carya illinoinensis HOM05D004948 ORTHO05D005824 3.0e-46 189.1 183 55.7
Actinidia34187 Actinidia chinensis HOM05D004948 ORTHO05D005824 4.0e-46 188.7 183 54.1
Duzib068G0205 Durio zibethinus HOM05D004948 ORTHO05D005824 8.8e-46 187.6 183 54.6
Cfa016354 Carpinus fangiana HOM05D004948 ORTHO05D005824 1.5e-45 186.8 183 54.6
COL.COLO4_04803 Corchorus olitorius HOM05D004948 ORTHO05D005824 1.5e-45 186.8 183 54.6
Ciclev10005800m.g Citrus clementina HOM05D004948 ORTHO05D005824 2.0e-45 186.4 182 54.9
Thecc.03G191700 Theobroma cacao HOM05D004948 ORTHO05D005824 2.0e-45 186.4 183 54.1
Dinv35301 Davidia involucrata HOM05D004948 ORTHO05D005824 2.6e-45 186.0 183 54.1
PGR083G1298 Punica granatum HOM05D004948 ORTHO05D005824 2.6e-45 186.0 183 54.1
CANSAT21G0873 Cannabis sativa HOM05D004948 ORTHO05D005824 3.4e-45 185.7 183 53.6
Prupe.2G306200 Prunus persica HOM05D004948 ORTHO05D005824 3.4e-45 185.7 183 54.1
GSVIVG01028728001 Vitis vinifera HOM05D004948 ORTHO05D005824 3.4e-45 185.7 183 53.0
ATR1132G055 Amborella trichopoda HOM05D004948 ORTHO05D005824 4.4e-45 185.3 182 53.3
Hma1.2p1_0142F.1_g064080 Hydrangea macrophylla HOM05D004948 ORTHO05D005824 4.4e-45 185.3 183 54.1
Potri.012G033100 Populus trichocarpa HOM05D004948 ORTHO05D005824 1.3e-44 183.7 183 53.0
Aqoxy5G04108 Aquilegia oxysepala HOM05D004948 ORTHO05D005824 1.7e-44 183.3 183 51.9
arahy.Tifrunner.gnm1.ann1.LZU7FF Arachis hypogaea HOM05D004948 ORTHO05D005824 2.2e-44 183.0 183 51.4
Eucgr.A02670 Eucalyptus grandis HOM05D004948 ORTHO05D005824 2.2e-44 183.0 183 53.6
Duzib205G0398 Durio zibethinus HOM05D004948 ORTHO05D005824 4.9e-44 181.8 180 53.9
TAR629G2953 Trochodendron aralioides HOM05D004948 ORTHO05D005824 4.9e-44 181.8 183 51.4
Dinv28347 Davidia involucrata HOM05D004948 ORTHO05D005824 6.3e-44 181.4 183 51.9
Cpa.g.sc3.41 Carica papaya HOM05D004948 ORTHO05D005824 8.3e-44 181.0 183 52.5
TAR636G2931 Trochodendron aralioides HOM05D004948 ORTHO05D005824 8.3e-44 181.0 183 51.9
Sed0002242 Sechium edule HOM05D004948 ORTHO05D005824 1.1e-43 180.6 182 51.6
Gohir.D12G253100 Gossypium hirsutum HOM05D004948 ORTHO05D005824 1.4e-43 180.3 183 52.5
Gohir.A12G252400 Gossypium hirsutum HOM05D004948 ORTHO05D005824 1.8e-43 179.9 183 51.9
CAN.G108.18 Capsicum annuum HOM05D004948 ORTHO05D005824 2.4e-43 179.5 183 53.0
Haze_00103 Corylus avellana HOM05D004948 ORTHO05D005824 2.4e-43 179.5 198 50.5
Gorai.008G271400 Gossypium raimondii HOM05D004948 ORTHO05D005824 2.4e-43 179.5 183 51.9
Lj1g0018821 Lotus japonicus HOM05D004948 ORTHO05D005824 2.4e-43 179.5 183 52.5
MD07G1283800 Malus domestica HOM05D004948 ORTHO05D005824 2.4e-43 179.5 174 54.6
RcHm_v2.0_Chr1g0379991 Rosa chinensis HOM05D004948 ORTHO05D005824 2.4e-43 179.5 177 54.8
EL10Ac3g05356 Beta vulgaris HOM05D004948 ORTHO05D005824 3.1e-43 179.1 180 51.7
AUR62021051 Chenopodium quinoa HOM05D004948 ORTHO05D005824 3.1e-43 179.1 182 51.1
AUR62031482 Chenopodium quinoa HOM05D004948 ORTHO05D005824 3.1e-43 179.1 182 51.1
HanXRQChr13g0392981 Helianthus annuus HOM05D004948 ORTHO05D005824 3.1e-43 179.1 187 51.3
Peaxi162Scf00904g00460 Petunia axillaris HOM05D004948 ORTHO05D005824 3.1e-43 179.1 183 52.5
ClCG01G000640 Citrullus lanatus HOM05D004948 ORTHO05D005824 4.1e-43 178.7 182 51.6
Sopen03g003430 Solanum pennellii HOM05D004948 ORTHO05D005824 4.1e-43 178.7 178 52.8
Solyc03g007480.3 Solanum lycopersicum HOM05D004948 ORTHO05D005824 5.4e-43 178.3 183 51.9
MSTRG.65 Avicennia marina HOM05D004948 ORTHO05D005824 7.0e-43 177.9 183 52.5
CsaV3_5G000730 Cucumis sativus L. HOM05D004948 ORTHO05D005824 1.2e-42 177.2 182 50.5
PGSC0003DMG400009097 Solanum tuberosum HOM05D004948 ORTHO05D005824 2.0e-42 176.4 183 51.9
MELO3C005865.2 Cucumis melo HOM05D004948 ORTHO05D005824 2.7e-42 176.0 182 50.5
MD01G1214200 Malus domestica HOM05D004948 ORTHO05D005824 2.7e-42 176.0 174 54.6
Manes.06G156200 Manihot esculenta HOM05D004948 ORTHO05D005824 2.7e-42 176.0 183 51.9
Peaxi162Scf00618g00525 Petunia axillaris HOM05D004948 ORTHO05D005824 2.7e-42 176.0 180 51.7
SGA_v2.0_scaffold10G05268 Striga asiatica HOM05D004948 ORTHO05D005824 2.7e-42 176.0 183 50.3
DCAR_010636 Daucus carota HOM05D004948 ORTHO05D005824 4.5e-42 175.3 180 52.2
Potri.015G023400 Populus trichocarpa HOM05D004948 ORTHO05D005824 4.5e-42 175.3 183 50.8
SalBow2G2244 Salvia bowleyana HOM05D004948 ORTHO05D005824 4.5e-42 175.3 183 51.4
PGSC0003DMG400028892 Solanum tuberosum HOM05D004948 ORTHO05D005824 4.5e-42 175.3 184 49.5
FAN10G0469 Fragaria x ananassa HOM05D004948 ORTHO05D005824 5.9e-42 174.9 183 51.9
FAN10G0476 Fragaria x ananassa HOM05D004948 ORTHO05D005824 5.9e-42 174.9 183 51.9
FAN01G0333 Fragaria x ananassa HOM05D004948 ORTHO05D005824 7.7e-42 174.5 183 51.9
FAN06G2108 Fragaria x ananassa HOM05D004948 ORTHO05D005824 7.7e-42 174.5 183 51.9
Sopen06g017830 Solanum pennellii HOM05D004948 ORTHO05D005824 7.7e-42 174.5 184 50.0
Migut.F01058 Erythranthe guttata HOM05D004948 ORTHO05D005824 1.0e-41 174.1 183 50.3
FAN06G4897 Fragaria x ananassa HOM05D004948 ORTHO05D005824 1.0e-41 174.1 183 51.9
Rhsim03G0197700 Rhododendron simsii HOM05D004948 ORTHO05D005824 1.0e-41 174.1 171 53.2
Solyc06g051820.4 Solanum lycopersicum HOM05D004948 ORTHO05D005824 1.3e-41 173.7 183 49.2
Lalb_Chr04g0263671 Lupinus albus HOM05D004948 ORTHO05D005824 1.7e-41 173.3 183 49.2
Sc19g0001090 Simmondsia chinensis HOM05D004948 ORTHO05D005824 5.0e-41 171.8 182 48.9
Glyma.13G040600 Glycine max HOM05D004948 ORTHO05D005824 6.6e-41 171.4 171 53.8
Oeu037114.1 Olea europaea HOM05D004948 ORTHO05D005824 1.1e-40 170.6 171 50.9
THA.LOC104800283 Tarenaya hassleriana HOM05D004948 ORTHO05D005824 4.3e-40 168.7 185 50.3
ECA233G3864 Erigeron canadensis HOM05D004948 ORTHO05D005824 2.1e-39 166.4 183 48.1
FvH4_7g30910 Fragaria vesca HOM05D004948 ORTHO05D005824 3.6e-39 165.6 191 49.2
TWI23G0483 Tripterygium wilfordii HOM05D004948 ORTHO05D005824 4.7e-39 165.2 185 48.1
Manes.14G019200 Manihot esculenta HOM05D004948 ORTHO05D005824 4.0e-38 162.2 171 48.0
arahy.Tifrunner.gnm1.ann1.MD6354 Arachis hypogaea HOM05D004948 ORTHO05D005824 8.9e-38 161.0 151 53.6
Lsat_1_v5_gn_8_6120 Lactuca sativa HOM05D004948 ORTHO05D005824 1.2e-37 160.6 183 47.0
CBR_g39340 Chara braunii HOM05D004948 ORTHO05D005824 2.0e-37 159.8 162 53.1
Aa31sc29G60 Aethionema arabicum HOM05D004948 ORTHO05D005824 2.6e-37 159.5 185 46.5
Duzib084G1367 Durio zibethinus HOM05D004948 ORTHO05D005824 3.4e-37 159.1 183 49.7
Aa31LG3G9220 Aethionema arabicum HOM05D004948 ORTHO05D005824 2.2e-36 156.4 180 45.0
Os01g0621700 Oryza sativa ssp. japonica HOM05D004948 ORTHO05D005824 2.2e-36 156.4 176 47.7
Aa31LG5G23580 Aethionema arabicum HOM05D004948 ORTHO05D005824 3.7e-36 155.6 185 45.4
Sabra12G0022300 Salix brachista HOM05D004948 ORTHO05D005824 3.7e-36 155.6 151 52.3
Hund27721 Selenicereus undatus HOM05D004948 ORTHO05D005824 6.4e-36 154.8 198 44.9
Hund27734 Selenicereus undatus HOM05D004948 ORTHO05D005824 6.4e-36 154.8 198 44.9
AT5G53310 Arabidopsis thaliana HOM05D004948 ORTHO05D005824 1.1e-35 154.1 179 45.8
Nn2g13651 Nelumbo nucifera HOM05D004948 ORTHO05D005824 1.4e-35 153.7 163 50.9
Sp6g15460 Schrenkiella parvula HOM05D004948 ORTHO05D005824 1.4e-35 153.7 182 45.6
Nitab4.5_0001331g0180 Nicotiana tabacum HOM05D004948 ORTHO05D005824 1.8e-35 153.3 151 51.7
Thhalv10014692m.g Eutrema salsugineum HOM05D004948 ORTHO05D005824 4.1e-35 152.1 182 45.1
Nitab4.5_0000472g0200 Nicotiana tabacum HOM05D004948 ORTHO05D005824 4.1e-35 152.1 151 51.0
AL8G28010 Arabidopsis lyrata HOM05D004948 ORTHO05D005824 7.0e-35 151.4 179 45.3
Carub.0008s1349 Capsella rubella HOM05D004948 ORTHO05D005824 7.0e-35 151.4 179 45.3
CAN.G204.5 Capsicum annuum HOM05D004948 ORTHO05D005824 7.0e-35 151.4 179 46.4
Lj3A912T42 Lonicera japonica HOM05D004948 ORTHO05D005824 9.2e-35 151.0 152 50.0
BcaB05g22031 Brassica carinata HOM05D004948 ORTHO05D005824 1.6e-34 150.2 175 45.7
CARHR266350 Cardamine hirsuta HOM05D004948 ORTHO05D005824 1.6e-34 150.2 179 45.3
BcaC03g14431 Brassica carinata HOM05D004948 ORTHO05D005824 2.0e-34 149.8 175 45.7
C02p18470 Brassica napus HOM05D004948 ORTHO05D005824 2.0e-34 149.8 175 45.7
BolC2t07987H Brassica oleracea HOM05D004948 ORTHO05D005824 2.0e-34 149.8 175 45.7
A02p11140 Brassica napus HOM05D004948 ORTHO05D005824 3.5e-34 149.1 175 45.7
BraA02t06177Z Brassica rapa HOM05D004948 ORTHO05D005824 3.5e-34 149.1 175 45.7
FAN03G1348 Fragaria x ananassa HOM05D004948 ORTHO05D005824 1.3e-33 147.1 183 46.4
CDE04G0161 Ceratophyllum demersum HOM05D004948 ORTHO05D005824 3.9e-33 145.6 180 43.9
Gohir.D09G178100 Gossypium hirsutum HOM05D004948 ORTHO05D005824 5.0e-33 145.2 159 48.4
Gorai.006G200200 Gossypium raimondii HOM05D004948 ORTHO05D005824 5.0e-33 145.2 159 48.4
SEGI_09652 Sequoiadendron giganteum HOM05D004948 ORTHO05D005824 5.0e-33 145.2 142 56.3
Gohir.A09G183400 Gossypium hirsutum HOM05D004948 ORTHO05D005824 6.6e-33 144.8 159 47.8
DCAR_008996 Daucus carota HOM05D002473 ORTHO05D005824 1.1e-32 144.1 155 49.0
TPR.G33862 Trifolium pratense HOM05D004948 ORTHO05D005824 3.3e-32 142.5 164 48.2
Glyma.04G238900 Glycine max HOM05D004948 ORTHO05D005824 7.3e-32 141.4 160 50.0
Lj1g0003063 Lotus japonicus HOM05D004948 ORTHO05D005824 7.3e-32 141.4 157 47.1
HPP92_024433 Vanilla planifolia HOM05D004948 ORTHO05D005824 1.6e-31 140.2 159 46.5
Cc02_g01980 Coffea canephora HOM05D004948 ORTHO05D005824 2.1e-31 139.8 164 47.6
DCAR_014528 Daucus carota HOM05D000121 ORTHO05D005824 2.8e-31 139.4 152 47.4
Glyma.06G124800 Glycine max HOM05D004948 ORTHO05D005824 3.6e-31 139.0 160 48.8
Ca_16670_v3 Cicer arietinum L. HOM05D004948 ORTHO05D005824 8.0e-31 137.9 165 44.8
Psat0s97g0080 Pisum sativum HOM05D004948 ORTHO05D005824 1.0e-30 137.5 160 45.0
Zm00001eb432120 Zea mays HOM05D004948 ORTHO05D005824 1.0e-30 137.5 155 49.7
Actinidia31860 Actinidia chinensis HOM05D004948 ORTHO05D005824 1.4e-30 137.1 162 48.8
arahy.Tifrunner.gnm1.ann1.NIM4HJ Arachis hypogaea HOM05D004948 ORTHO05D005824 2.0e-29 133.3 165 46.1
Phvul.009G135700 Phaseolus vulgaris HOM05D004948 ORTHO05D005824 2.6e-29 132.9 160 46.2
VMungo1309G3087 Vigna mungo HOM05D004948 ORTHO05D005824 4.4e-29 132.1 173 41.0
Medtr3g090670 Medicago truncatula HOM05D004948 ORTHO05D005824 9.8e-29 131.0 148 47.3
unitig_747.g21853 Utricularia gibba HOM05D004948 ORTHO05D005824 1.3e-28 130.6 160 47.5
Ah.07g206090 Amaranthus hybridus HOM05D004948 ORTHO05D005824 2.2e-28 129.8 141 51.1
TWI39G0355 Tripterygium wilfordii HOM05D004948 ORTHO05D005824 2.2e-28 129.8 142 51.4
Lalb_Chr08g0240671 Lupinus albus HOM05D004948 ORTHO05D005824 8.3e-28 127.9 160 43.8
arahy.Tifrunner.gnm1.ann1.AMC2P5 Arachis hypogaea HOM05D004948 ORTHO05D005824 1.2e-26 124.0 176 42.0
CSS0002011 Camellia sinensis var. sinensis HOM05D004948 ORTHO05D005824 5.0e-25 118.6 121 55.4
SHI54648 Sapria himalayana HOM05D004948 ORTHO05D005824 5.0e-25 118.6 177 44.1
SHI54754 Sapria himalayana HOM05D004948 ORTHO05D005824 5.0e-25 118.6 177 44.1
Nitab4.5_0002176g0030 Nicotiana tabacum HOM05D004948 ORTHO05D005824 8.6e-25 117.9 129 49.6
Actinidia08617 Actinidia chinensis HOM05D004948 ORTHO05D005824 1.5e-24 117.1 149 45.6
CSS0025713 Camellia sinensis var. sinensis HOM05D004948 ORTHO05D005824 2.6e-21 106.3 109 54.1
CSS0008262 Camellia sinensis var. sinensis HOM05D004948 ORTHO05D005824 7.5e-21 104.8 109 53.2
MCO05G504 Micromonas commoda HOM05D004948 ORTHO05D005824 2.9e-20 102.8 205 32.2
Lj1P1012T60 Lonicera japonica HOM05D004948 ORTHO05D005824 8.6e-17 91.3 109 45.0
BolC9t57186H Brassica oleracea HOM05D004948 ORTHO05D005824 2.1e-15 86.7 187 34.2
BcaC04g20470 Brassica carinata HOM05D004948 ORTHO05D005824 6.2e-15 85.1 181 33.7
C09p43150 Brassica napus HOM05D004948 ORTHO05D005824 8.1e-15 84.7 187 33.2
BcaB08g35692 Brassica carinata HOM05D004948 ORTHO05D005824 8.4e-12 74.7 92 42.4
Lalb_Chr23g0271431 Lupinus albus HOM05D004948 ORTHO05D005824 1.8e-06 57.0 160 30.0
CSS0011379 Camellia sinensis var. sinensis HOM05D004948 ORTHO05D005824 5.2e-06 55.5 41 53.7
CSS0022164 Camellia sinensis var. sinensis HOM05D004948 ORTHO05D005824 5.2e-06 55.5 41 53.7


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