Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c8_7150 Physcomitrium patens HOM05D006279 ORTHO05D008055 1.8e-54 215.7 111 100.0
Psat4g003200 Pisum sativum HOM05D006279 ORTHO05D008055 1.3e-12 76.6 76 47.4
Ca_13203_v3 Cicer arietinum L. HOM05D006279 ORTHO05D008055 1.4e-11 73.2 80 41.2
Psat6g191840 Pisum sativum HOM05D006279 ORTHO05D008055 1.4e-11 73.2 71 46.5
TPR.G17035 Trifolium pratense HOM05D006279 ORTHO05D008055 1.4e-11 73.2 71 47.9
Actinidia20026 Actinidia chinensis HOM05D006279 ORTHO05D008055 1.9e-11 72.8 91 41.8
arahy.Tifrunner.gnm1.ann1.YQI87S Arachis hypogaea HOM05D006279 ORTHO05D008055 5.5e-11 71.2 69 47.8
BolC2t06340H Brassica oleracea HOM05D006279 ORTHO05D008055 5.5e-11 71.2 89 40.4
arahy.Tifrunner.gnm1.ann1.96G0FW Arachis hypogaea HOM05D006279 ORTHO05D008055 7.2e-11 70.9 69 46.4
Cpa.g.sc2692.1 Carica papaya HOM05D006279 ORTHO05D008055 7.2e-11 70.9 74 44.6
Potri.007G102600 Populus trichocarpa HOM05D006279 ORTHO05D008055 9.4e-11 70.5 82 46.3
AT5G09270 Arabidopsis thaliana HOM05D006279 ORTHO05D008055 1.2e-10 70.1 99 40.4
CARHR204140 Cardamine hirsuta HOM05D006279 ORTHO05D008055 1.2e-10 70.1 82 42.7
Cc09_g10080 Coffea canephora HOM05D006279 ORTHO05D008055 1.2e-10 70.1 81 43.2
Glyma.08G354200 Glycine max HOM05D006279 ORTHO05D008055 1.2e-10 70.1 71 43.7
FvH4_6g45500 Fragaria vesca HOM05D006279 ORTHO05D008055 1.6e-10 69.7 80 43.8
FAN14G0828 Fragaria x ananassa HOM05D006279 ORTHO05D008055 1.6e-10 69.7 80 43.8
Nn2g15145 Nelumbo nucifera HOM05D006279 ORTHO05D008055 1.6e-10 69.7 105 37.1
Sabra07G0084300 Salix brachista HOM05D006279 ORTHO05D008055 1.6e-10 69.7 71 47.9
Ah.06g190980 Amaranthus hybridus HOM05D006279 ORTHO05D008055 2.1e-10 69.3 93 39.8
BcaB08g37221 Brassica carinata HOM05D006279 ORTHO05D008055 2.1e-10 69.3 84 44.0
Glyma.18G170600 Glycine max HOM05D006279 ORTHO05D008055 2.1e-10 69.3 71 45.1
VMungo1383G1366 Vigna mungo HOM05D006279 ORTHO05D008055 2.1e-10 69.3 81 42.0
Thhalv10015068m.g Eutrema salsugineum HOM05D006279 ORTHO05D008055 3.6e-10 68.6 102 38.2
FAN09G2945 Fragaria x ananassa HOM05D006279 ORTHO05D008055 3.6e-10 68.6 93 39.8
Phvul.008G125700 Phaseolus vulgaris HOM05D006279 ORTHO05D008055 3.6e-10 68.6 81 42.0
Potri.005G066900 Populus trichocarpa HOM05D006279 ORTHO05D008055 3.6e-10 68.6 90 41.1
BcaC03g13247 Brassica carinata HOM05D006279 ORTHO05D008055 4.6e-10 68.2 89 39.3
C02p03790 Brassica napus HOM05D006279 ORTHO05D008055 4.6e-10 68.2 89 39.3
BolC9t59565H Brassica oleracea HOM05D004285 ORTHO05D005176 4.6e-10 68.2 81 43.2
BraA10t44844Z Brassica rapa HOM05D006279 ORTHO05D008055 4.6e-10 68.2 70 47.1
vmacro12040 Vaccinium macrocarpon HOM05D006279 ORTHO05D008055 4.6e-10 68.2 76 46.1
C09p68090 Brassica napus HOM05D004285 ORTHO05D005176 6.1e-10 67.8 106 35.8
C09p68110 Brassica napus HOM05D006279 ORTHO05D008055 6.1e-10 67.8 106 35.8
C09p68150 Brassica napus HOM05D006279 ORTHO05D008055 6.1e-10 67.8 106 35.8
CAN.G1592.9 Capsicum annuum HOM05D006279 ORTHO05D008055 6.1e-10 67.8 99 39.4
Sp6g34040 Schrenkiella parvula HOM05D006279 ORTHO05D008055 6.1e-10 67.8 100 38.0
PGSC0003DMG400022672 Solanum tuberosum HOM05D006279 ORTHO05D008055 6.1e-10 67.8 89 39.3
Atru.chr1.2785 Acer truncatum HOM05D006279 ORTHO05D008055 7.9e-10 67.4 88 38.6
Carub.0006s0782 Capsella rubella HOM05D006279 ORTHO05D008055 7.9e-10 67.4 85 42.4
FAN05G3461 Fragaria x ananassa HOM05D006279 ORTHO05D008055 7.9e-10 67.4 77 44.2
A10p27950 Brassica napus HOM05D004285 ORTHO05D005176 1.0e-09 67.0 85 43.5
BraA02t04974Z Brassica rapa HOM05D006279 ORTHO05D008055 1.0e-09 67.0 89 39.3
Nitab4.5_0000644g0080 Nicotiana tabacum HOM05D006279 ORTHO05D008055 1.0e-09 67.0 89 40.4
QL10p041722 Quercus lobata HOM05D006279 ORTHO05D008055 1.0e-09 67.0 81 44.4
THA.LOC104818424 Tarenaya hassleriana HOM05D006279 ORTHO05D008055 1.0e-09 67.0 79 44.3
Aqoxy2G01154 Aquilegia oxysepala HOM05D006279 ORTHO05D008055 1.4e-09 66.6 83 39.8
AL6G19660 Arabidopsis lyrata HOM05D006279 ORTHO05D008055 1.4e-09 66.6 98 38.8
EL10Ac4g09617 Beta vulgaris HOM05D006279 ORTHO05D008055 1.4e-09 66.6 93 39.8
BcaB05g21561 Brassica carinata HOM05D006279 ORTHO05D008055 1.4e-09 66.6 85 43.5
COL.COLO4_11288 Corchorus olitorius HOM05D006279 ORTHO05D008055 1.4e-09 66.6 89 40.4
Lj1g0019467 Lotus japonicus HOM05D006279 ORTHO05D008055 2.3e-09 65.9 71 43.7
Mapoly0027s0076 Marchantia polymorpha HOM05D006279 ORTHO05D008055 2.3e-09 65.9 87 36.8
Peaxi162Scf00386g00058 Petunia axillaris HOM05D006279 ORTHO05D008055 2.3e-09 65.9 78 39.7
vmacro13565 Vaccinium macrocarpon HOM05D006279 ORTHO05D008055 2.3e-09 65.9 76 42.1
MBI06_g37673_MAGBIO Magnolia biondii HOM05D006279 ORTHO05D008055 3.0e-09 65.5 70 44.3
MBI06_g46723_MAGBIO Magnolia biondii HOM05D006279 ORTHO05D008055 3.0e-09 65.5 70 44.3
Os01g0861000 Oryza sativa ssp. japonica HOM05D006279 ORTHO05D008055 3.0e-09 65.5 71 42.3
SEGI_20234 Sequoiadendron giganteum HOM05D006279 ORTHO05D008055 3.0e-09 65.5 91 40.7
Solyc06g054590.3 Solanum lycopersicum HOM05D006279 ORTHO05D008055 3.0e-09 65.5 116 36.2
HPP92_013811 Vanilla planifolia HOM05D006279 ORTHO05D008055 3.0e-09 65.5 70 42.9
C09p68050 Brassica napus HOM05D006279 ORTHO05D008055 3.9e-09 65.1 106 34.9
Cfa011174 Carpinus fangiana HOM05D006279 ORTHO05D008055 3.9e-09 65.1 74 41.9
Duzib177G0075 Durio zibethinus HOM05D006279 ORTHO05D008055 3.9e-09 65.1 80 38.8
Manes.01G181300 Manihot esculenta HOM05D006279 ORTHO05D008055 3.9e-09 65.1 90 37.8
Nitab4.5_0001688g0060 Nicotiana tabacum HOM05D006279 ORTHO05D008055 3.9e-09 65.1 87 40.2
Rhsim10G0172600 Rhododendron simsii HOM05D006279 ORTHO05D008055 3.9e-09 65.1 59 50.8
arahy.Tifrunner.gnm1.ann1.BRZ89T Arachis hypogaea HOM05D006279 ORTHO05D008055 5.1e-09 64.7 69 43.5
Ciclev10003637m.g Citrus clementina HOM05D006279 ORTHO05D008055 5.1e-09 64.7 64 46.9
Gohir.D05G287900 Gossypium hirsutum HOM05D006279 ORTHO05D008055 5.1e-09 64.7 80 37.5
Gorai.009G302900 Gossypium raimondii HOM05D006279 ORTHO05D008055 5.1e-09 64.7 80 37.5
RcHm_v2.0_Chr2g0163441 Rosa chinensis HOM05D006279 ORTHO05D008055 5.1e-09 64.7 106 36.8
Sopen06g019660 Solanum pennellii HOM05D006279 ORTHO05D008055 5.1e-09 64.7 116 36.2
Oeu006489.1 Olea europaea HOM05D006279 ORTHO05D008055 6.7e-09 64.3 114 35.1
Sc09g0002260 Simmondsia chinensis HOM05D006279 ORTHO05D008055 6.7e-09 64.3 76 39.5
Thecc.08G189700 Theobroma cacao HOM05D006279 ORTHO05D008055 6.7e-09 64.3 80 38.8
CSS0005410 Camellia sinensis var. sinensis HOM05D006279 ORTHO05D008055 8.8e-09 63.9 70 42.9
Haze_02661 Corylus avellana HOM05D006279 ORTHO05D008055 8.8e-09 63.9 82 40.2
Dinv44192 Davidia involucrata HOM05D006279 ORTHO05D008055 8.8e-09 63.9 85 38.8
Gohir.A05G286900 Gossypium hirsutum HOM05D006279 ORTHO05D008055 8.8e-09 63.9 80 37.5
Nitab4.5_0000829g0220 Nicotiana tabacum HOM05D006279 ORTHO05D008055 8.8e-09 63.9 89 38.2
Peaxi162Scf00033g00134 Petunia axillaris HOM05D006279 ORTHO05D008055 8.8e-09 63.9 77 39.0
Sabra05G0055000 Salix brachista HOM05D006279 ORTHO05D008055 8.8e-09 63.9 109 37.6
Haze_02674 Corylus avellana HOM05D006279 ORTHO05D008055 1.1e-08 63.5 82 40.2
Eucgr.I00130 Eucalyptus grandis HOM05D006279 ORTHO05D008055 1.1e-08 63.5 101 35.6
Hma1.2p1_0847F.1_g227850 Hydrangea macrophylla HOM05D006279 ORTHO05D008055 1.1e-08 63.5 100 35.0
Lsat_1_v5_gn_5_86080 Lactuca sativa HOM05D006279 ORTHO05D008055 1.1e-08 63.5 74 43.2
PGR119G2211 Punica granatum HOM05D006279 ORTHO05D008055 1.1e-08 63.5 66 47.0
PGSC0003DMG400030782 Solanum tuberosum HOM05D006279 ORTHO05D008055 1.5e-08 63.2 116 35.3
Actinidia30262 Actinidia chinensis HOM05D006279 ORTHO05D008055 1.9e-08 62.8 73 41.1
CiPaw.14G026200 Carya illinoinensis HOM05D006279 ORTHO05D008055 1.9e-08 62.8 66 45.5
Nitab4.5_0010800g0010 Nicotiana tabacum HOM05D006279 ORTHO05D008055 1.9e-08 62.8 78 39.7
COL.COLO4_13057 Corchorus olitorius HOM05D006279 ORTHO05D008055 2.5e-08 62.4 92 34.8
ATR0824G232 Amborella trichopoda HOM05D006279 ORTHO05D008055 4.3e-08 61.6 63 46.0
CSS0021017 Camellia sinensis var. sinensis HOM05D006279 ORTHO05D008055 4.3e-08 61.6 70 41.4
Medtr1g098510 Medicago truncatula HOM05D006279 ORTHO05D008055 4.3e-08 61.6 72 36.1
ClCG02G000360 Citrullus lanatus HOM05D006279 ORTHO05D008055 5.7e-08 61.2 73 35.6
MD10G1003300 Malus domestica HOM05D006279 ORTHO05D008055 5.7e-08 61.2 82 36.6
DCAR_026025 Daucus carota HOM05D006279 ORTHO05D008055 7.4e-08 60.8 78 42.3
TAR369G0312 Trochodendron aralioides HOM05D006279 ORTHO05D008055 7.4e-08 60.8 69 42.0
Aa31LG3G17730 Aethionema arabicum HOM05D006279 ORTHO05D008055 9.7e-08 60.5 66 42.4
Sed0009157 Sechium edule HOM05D006279 ORTHO05D008055 9.7e-08 60.5 69 42.0
TAR623G0329 Trochodendron aralioides HOM05D006279 ORTHO05D008055 9.7e-08 60.5 71 42.3
AUR62006855 Chenopodium quinoa HOM05D006279 ORTHO05D008055 1.3e-07 60.1 83 37.3
Migut.B01200 Erythranthe guttata HOM05D006279 ORTHO05D008055 1.3e-07 60.1 69 39.1
MD09G1082400 Malus domestica HOM05D006279 ORTHO05D008055 1.3e-07 60.1 82 35.4
CAN.G256.17 Capsicum annuum HOM05D006279 ORTHO05D008055 1.7e-07 59.7 96 34.4
AUR62000510 Chenopodium quinoa HOM05D006279 ORTHO05D008055 1.7e-07 59.7 83 37.3
CsaV3_2G019480 Cucumis sativus L. HOM05D006279 ORTHO05D008055 2.8e-07 58.9 104 31.7
HanXRQChr10g0308251 Helianthus annuus HOM05D006279 ORTHO05D008055 2.8e-07 58.9 77 35.1
TWI79G1313 Tripterygium wilfordii HOM05D006279 ORTHO05D008055 2.8e-07 58.9 89 37.1
MSTRG.20541 Avicennia marina HOM05D006279 ORTHO05D008055 3.7e-07 58.5 77 35.1
Lalb_Chr01g0022321 Lupinus albus HOM05D006279 ORTHO05D008055 3.7e-07 58.5 64 42.2
arahy.Tifrunner.gnm1.ann1.BUL9CE Arachis hypogaea HOM05D006279 ORTHO05D008055 6.3e-07 57.8 54 48.1
CANSAT64G0511 Cannabis sativa HOM05D006279 ORTHO05D008055 6.3e-07 57.8 86 37.2
CANSAT78G0480 Cannabis sativa HOM05D006279 ORTHO05D008055 8.2e-07 57.4 62 43.5
Eucgr.L03476 Eucalyptus grandis HOM05D006279 ORTHO05D008055 1.1e-06 57.0 70 38.6
COL.COLO4_36340 Corchorus olitorius HOM05D006279 ORTHO05D008055 1.4e-06 56.6 64 34.4
Prupe.3G241300 Prunus persica HOM05D006279 ORTHO05D008055 1.8e-06 56.2 99 30.3
SHI36067 Sapria himalayana HOM05D006279 ORTHO05D008055 5.3e-06 54.7 73 37.0
Eucgr.I00134 Eucalyptus grandis HOM05D006279 ORTHO05D008055 6.9e-06 54.3 71 39.4


User provided reference genes

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