Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c8_5790 Physcomitrium patens HOM05D000929 ORTHO05D003255 1.1e-43 179.5 89 100.0
Pp3c15_650 Physcomitrium patens HOM05D000929 ORTHO05D003255 5.7e-19 97.4 48 97.9
AagrBONN_evm.TU.Sc2ySwM_344.3491 Anthoceros agrestis HOM05D000929 ORTHO05D003255 4.8e-18 94.4 48 93.8
Pp3c26_590 Physcomitrium patens HOM05D000929 ORTHO05D003255 4.8e-18 94.4 48 91.7
Pp3c17_4870 Physcomitrium patens HOM05D000929 ORTHO05D003255 9.1e-17 90.1 48 89.6
Mapoly0130s0022 Marchantia polymorpha HOM05D000929 ORTHO05D003255 3.5e-16 88.2 48 85.4
SMO347G0230 Selaginella moellendorffii HOM05D000929 ORTHO05D003255 4.5e-16 87.8 48 85.4
CBR_g41578 Chara braunii HOM05D000929 ORTHO05D003255 1.0e-15 86.7 48 83.3
MCO03G372 Micromonas commoda HOM05D000929 ORTHO05D003255 1.5e-14 82.8 48 79.2
SEGI_27871 Sequoiadendron giganteum HOM05D000929 ORTHO05D003255 1.9e-14 82.4 47 83.0
ATR1149G054 Amborella trichopoda HOM05D000929 ORTHO05D003255 5.5e-14 80.9 47 80.9
Lalb_Chr05g0227851 Lupinus albus HOM05D000929 ORTHO05D003255 5.5e-14 80.9 55 70.9
Lsat_1_v5_gn_6_17021 Lactuca sativa HOM05D000929 ORTHO05D003255 7.2e-14 80.5 49 77.6
arahy.Tifrunner.gnm1.ann1.0K9FD0 Arachis hypogaea HOM05D000929 ORTHO05D003255 2.1e-13 79.0 70 55.7
arahy.Tifrunner.gnm1.ann1.3RZB0U Arachis hypogaea HOM05D000929 ORTHO05D003255 2.1e-13 79.0 70 55.7
CAN.G1082.5 Capsicum annuum HOM05D000929 ORTHO05D003255 2.8e-13 78.6 50 74.0
Dinv31017 Davidia involucrata HOM05D000929 ORTHO05D003255 2.8e-13 78.6 70 54.3
HanXRQChr12g0371361 Helianthus annuus HOM05D000929 ORTHO05D003255 2.8e-13 78.6 47 78.7
Nn3g16925 Nelumbo nucifera HOM05D000929 ORTHO05D003255 2.8e-13 78.6 70 55.7
Nitab4.5_0000031g0020 Nicotiana tabacum HOM05D000929 ORTHO05D003255 2.8e-13 78.6 52 76.9
Oeu001748.1 Olea europaea HOM05D000929 ORTHO05D003255 2.8e-13 78.6 47 80.9
PSO063G4361 Papaver somniferum HOM05D000929 ORTHO05D003255 3.6e-13 78.2 47 78.7
PSO832G0605 Papaver somniferum HOM05D000929 ORTHO05D003255 3.6e-13 78.2 47 78.7
Lsat_1_v5_gn_5_22660 Lactuca sativa HOM05D000929 ORTHO05D003255 4.7e-13 77.8 57 71.9
Lsat_1_v5_gn_6_18541 Lactuca sativa HOM05D000929 ORTHO05D003255 4.7e-13 77.8 70 54.3
Atru.chr11.1995 Acer truncatum HOM05D000929 ORTHO05D003255 6.1e-13 77.4 47 78.7
Actinidia01711 Actinidia chinensis HOM05D000929 ORTHO05D003255 6.1e-13 77.4 47 78.7
Actinidia27779 Actinidia chinensis HOM05D000929 ORTHO05D003255 6.1e-13 77.4 47 78.7
AL2G16620 Arabidopsis lyrata HOM05D000929 ORTHO05D003255 6.1e-13 77.4 47 78.7
AT1G60070 Arabidopsis thaliana HOM05D000929 ORTHO05D003255 6.1e-13 77.4 47 78.7
arahy.Tifrunner.gnm1.ann1.MKS3V3 Arachis hypogaea HOM05D000929 ORTHO05D003255 6.1e-13 77.4 47 78.7
BcaB04g20249 Brassica carinata HOM05D000929 ORTHO05D003255 6.1e-13 77.4 47 78.7
CSS0044632 Camellia sinensis var. sinensis HOM05D000929 ORTHO05D003255 6.1e-13 77.4 47 78.7
CDE01G0215 Ceratophyllum demersum HOM05D000929 ORTHO05D003255 6.1e-13 77.4 47 78.7
CDE02G0944 Ceratophyllum demersum HOM05D000929 ORTHO05D003255 6.1e-13 77.4 47 78.7
Ca_04610_v3 Cicer arietinum L. HOM05D000929 ORTHO05D003255 6.1e-13 77.4 47 78.7
Ciclev10030683m.g Citrus clementina HOM05D000929 ORTHO05D003255 6.1e-13 77.4 47 78.7
Cc11_g14450 Coffea canephora HOM05D000929 ORTHO05D003255 6.1e-13 77.4 47 78.7
ECA246G2227 Erigeron canadensis HOM05D000929 ORTHO05D003255 6.1e-13 77.4 47 78.7
Migut.E00152 Erythranthe guttata HOM05D000929 ORTHO05D003255 6.1e-13 77.4 47 78.7
Migut.L01430 Erythranthe guttata HOM05D000929 ORTHO05D003255 6.1e-13 77.4 47 78.7
Eucgr.B03952 Eucalyptus grandis HOM05D000929 ORTHO05D003255 6.1e-13 77.4 47 78.7
Thhalv10023264m.g Eutrema salsugineum HOM05D000929 ORTHO05D003255 6.1e-13 77.4 47 78.7
FvH4_4g34830 Fragaria vesca HOM05D000929 ORTHO05D003255 6.1e-13 77.4 47 78.7
FAN17G2555 Fragaria x ananassa HOM05D000929 ORTHO05D003255 6.1e-13 77.4 48 77.1
Glyma.01G032100 Glycine max HOM05D000929 ORTHO05D003255 6.1e-13 77.4 47 78.7
Lj2g0010189 Lotus japonicus HOM05D000929 ORTHO05D003255 6.1e-13 77.4 47 78.7
Lalb_Chr05g0217021 Lupinus albus HOM05D000929 ORTHO05D003255 6.1e-13 77.4 47 78.7
Lalb_Chr09g0326431 Lupinus albus HOM05D000929 ORTHO05D003255 6.1e-13 77.4 47 78.7
MD13G1089300 Malus domestica HOM05D000929 ORTHO05D003255 6.1e-13 77.4 47 78.7
MD16G1089500 Malus domestica HOM05D000929 ORTHO05D003255 6.1e-13 77.4 47 78.7
Medtr5g034780 Medicago truncatula HOM05D000929 ORTHO05D003255 6.1e-13 77.4 47 78.7
Medtr8g063690 Medicago truncatula HOM05D000929 ORTHO05D003255 6.1e-13 77.4 47 78.7
Nn4g22838 Nelumbo nucifera HOM05D000929 ORTHO05D003255 6.1e-13 77.4 68 57.4
Nitab4.5_0000925g0040 Nicotiana tabacum HOM05D000929 ORTHO05D003255 6.1e-13 77.4 47 78.7
Phvul.002G072600 Phaseolus vulgaris HOM05D000929 ORTHO05D003255 6.1e-13 77.4 47 78.7
Psat2g105480 Pisum sativum HOM05D000929 ORTHO05D003255 6.1e-13 77.4 47 78.7
SalBow2G0004 Salvia bowleyana HOM05D000929 ORTHO05D003255 6.1e-13 77.4 47 78.7
SalBow2G3165 Salvia bowleyana HOM05D000929 ORTHO05D003255 6.1e-13 77.4 47 78.7
Sp2g04530 Schrenkiella parvula HOM05D000929 ORTHO05D003255 6.1e-13 77.4 47 78.7
THA.LOC104819479 Tarenaya hassleriana HOM05D000929 ORTHO05D003255 6.1e-13 77.4 47 78.7
THA.LOC104822131 Tarenaya hassleriana HOM05D000929 ORTHO05D003255 6.1e-13 77.4 70 52.9
TPR.G29173 Trifolium pratense HOM05D000929 ORTHO05D003255 6.1e-13 77.4 47 78.7
MSTRG.606 Avicennia marina HOM05D000929 ORTHO05D003255 8.0e-13 77.0 47 76.6
EL10Ac6g13647 Beta vulgaris HOM05D000929 ORTHO05D003255 8.0e-13 77.0 47 76.6
Carub.0002s0518 Capsella rubella HOM05D000929 ORTHO05D003255 8.0e-13 77.0 47 78.7
AUR62005349 Chenopodium quinoa HOM05D000929 ORTHO05D003255 8.0e-13 77.0 47 76.6
AUR62014001 Chenopodium quinoa HOM05D000929 ORTHO05D003255 8.0e-13 77.0 47 76.6
Manes.01G198500 Manihot esculenta HOM05D000929 ORTHO05D003255 8.0e-13 77.0 47 74.5
Manes.05G088300 Manihot esculenta HOM05D000929 ORTHO05D003255 8.0e-13 77.0 70 54.3
Psat4g127600 Pisum sativum HOM05D000929 ORTHO05D003255 8.0e-13 77.0 47 76.6
Hund25335 Selenicereus undatus HOM05D000929 ORTHO05D003255 8.0e-13 77.0 68 54.4
Solyc04g025870.4 Solanum lycopersicum HOM05D000929 ORTHO05D003255 8.0e-13 77.0 47 76.6
Sopen04g013480 Solanum pennellii HOM05D000929 ORTHO05D003255 8.0e-13 77.0 47 76.6
Aa31LG2G10170 Aethionema arabicum HOM05D000929 ORTHO05D003255 1.0e-12 76.6 47 76.6
CARHR052880 Cardamine hirsuta HOM05D000929 ORTHO05D003255 1.0e-12 76.6 47 76.6
Glyma.08G289100 Glycine max HOM05D000929 ORTHO05D003255 1.0e-12 76.6 47 78.7
Gohir.A03G141000 Gossypium hirsutum HOM05D000929 ORTHO05D003255 1.0e-12 76.6 68 55.9
Lj6C803G6 Lonicera japonica HOM05D000929 ORTHO05D003255 1.0e-12 76.6 47 76.6
Sc11g0001280 Simmondsia chinensis HOM05D000929 ORTHO05D003255 1.0e-12 76.6 70 52.9
BcaB03g14129 Brassica carinata HOM05D000929 ORTHO05D003255 1.4e-12 76.3 47 74.5
BcaB07g32364 Brassica carinata HOM05D000929 ORTHO05D003255 1.4e-12 76.3 47 74.5
BcaB07g32366 Brassica carinata HOM05D000929 ORTHO05D003255 1.4e-12 76.3 47 74.5
BcaC06g35060 Brassica carinata HOM05D000929 ORTHO05D003255 1.4e-12 76.3 47 74.5
A07p13710 Brassica napus HOM05D000929 ORTHO05D003255 1.4e-12 76.3 47 74.5
A09p40930 Brassica napus HOM05D000929 ORTHO05D003255 1.4e-12 76.3 47 74.5
C05p23090 Brassica napus HOM05D000929 ORTHO05D003255 1.4e-12 76.3 47 74.5
C07p20170 Brassica napus HOM05D000929 ORTHO05D003255 1.4e-12 76.3 47 74.5
BolC5t31007H Brassica oleracea HOM05D000929 ORTHO05D003255 1.4e-12 76.3 47 74.5
BolC7t42538H Brassica oleracea HOM05D000929 ORTHO05D003255 1.4e-12 76.3 47 74.5
BraA07t29122Z Brassica rapa HOM05D000929 ORTHO05D003255 1.4e-12 76.3 47 74.5
BraA09t39583Z Brassica rapa HOM05D000929 ORTHO05D003255 1.4e-12 76.3 47 74.5
CARHR024300 Cardamine hirsuta HOM05D000929 ORTHO05D003255 1.4e-12 76.3 47 74.5
DCAR_024138 Daucus carota HOM05D000929 ORTHO05D003255 1.4e-12 76.3 70 54.3
Thhalv10006767m.g Eutrema salsugineum HOM05D000929 ORTHO05D003255 1.4e-12 76.3 47 74.5
Oeu039476.1 Olea europaea HOM05D000929 ORTHO05D003255 1.4e-12 76.3 47 78.7
Sp1g21250 Schrenkiella parvula HOM05D000929 ORTHO05D003255 1.4e-12 76.3 47 74.5
ClCG05G025180 Citrullus lanatus HOM05D000929 ORTHO05D003255 1.8e-12 75.9 47 76.6
MELO3C012011.2 Cucumis melo HOM05D000929 ORTHO05D003255 1.8e-12 75.9 47 76.6
CsaV3_5G031710 Cucumis sativus L. HOM05D000929 ORTHO05D003255 1.8e-12 75.9 47 76.6
Dinv24884 Davidia involucrata HOM05D000929 ORTHO05D003255 1.8e-12 75.9 47 76.6
Duzib268G0481 Durio zibethinus HOM05D000929 ORTHO05D003255 1.8e-12 75.9 47 76.6
Gorai.005G183900 Gossypium raimondii HOM05D000929 ORTHO05D003255 1.8e-12 75.9 47 76.6
Hma1.2p1_0867F.1_g230390 Hydrangea macrophylla HOM05D000929 ORTHO05D003255 1.8e-12 75.9 47 76.6
Oeu027459.1 Olea europaea HOM05D000929 ORTHO05D003255 1.8e-12 75.9 47 76.6
Potri.006G092800 Populus trichocarpa HOM05D000929 ORTHO05D003255 1.8e-12 75.9 47 76.6
Prupe.1G256500 Prunus persica HOM05D000929 ORTHO05D003255 1.8e-12 75.9 47 76.6
Sabra06G0070500 Salix brachista HOM05D000929 ORTHO05D003255 1.8e-12 75.9 47 76.6
Sed0009259 Sechium edule HOM05D000929 ORTHO05D003255 1.8e-12 75.9 47 76.6
Sed0022852 Sechium edule HOM05D000929 ORTHO05D003255 1.8e-12 75.9 47 76.6
Thecc.02G246200 Theobroma cacao HOM05D000929 ORTHO05D003255 1.8e-12 75.9 47 76.6
TAR371G0396 Trochodendron aralioides HOM05D000929 ORTHO05D003255 1.8e-12 75.9 47 76.6
TAR374G1447 Trochodendron aralioides HOM05D000929 ORTHO05D003255 1.8e-12 75.9 47 76.6
TAR622G1265 Trochodendron aralioides HOM05D000929 ORTHO05D003255 1.8e-12 75.9 47 76.6
unitig_22.g6932 Utricularia gibba HOM05D000929 ORTHO05D003255 1.8e-12 75.9 47 76.6
Aqoxy3G00960 Aquilegia oxysepala HOM05D000929 ORTHO05D003255 2.3e-12 75.5 47 76.6
Duzib251G0010 Durio zibethinus HOM05D000929 ORTHO05D003255 2.3e-12 75.5 47 74.5
Gohir.A01G141400 Gossypium hirsutum HOM05D000929 ORTHO05D003255 2.3e-12 75.5 47 74.5
Gohir.D01G132800 Gossypium hirsutum HOM05D000929 ORTHO05D003255 2.3e-12 75.5 47 74.5
Gorai.002G164400 Gossypium raimondii HOM05D000929 ORTHO05D003255 2.3e-12 75.5 47 74.5
Potri.016G104700 Populus trichocarpa HOM05D000929 ORTHO05D003255 2.3e-12 75.5 47 74.5
PGR119G1498 Punica granatum HOM05D000929 ORTHO05D003255 2.3e-12 75.5 47 76.6
Rhsim12G0047900 Rhododendron simsii HOM05D000929 ORTHO05D003255 2.3e-12 75.5 47 74.5
SHI27107 Sapria himalayana HOM05D000929 ORTHO05D003255 2.3e-12 75.5 48 75.0
Hund05973 Selenicereus undatus HOM05D000929 ORTHO05D003255 2.3e-12 75.5 47 74.5
TWI36G1374 Tripterygium wilfordii HOM05D000929 ORTHO05D003255 2.3e-12 75.5 47 74.5
vmacro01188 Vaccinium macrocarpon HOM05D000929 ORTHO05D003255 2.3e-12 75.5 47 74.5
arahy.Tifrunner.gnm1.ann1.095X5J Arachis hypogaea HOM05D000929 ORTHO05D003255 3.0e-12 75.1 47 76.6
CANSAT01G0657 Cannabis sativa HOM05D000929 ORTHO05D003255 3.0e-12 75.1 47 74.5
Lalb_Chr16g0382361 Lupinus albus HOM05D000929 ORTHO05D003255 3.0e-12 75.1 47 76.6
RcHm_v2.0_Chr4g0444171 Rosa chinensis HOM05D000929 ORTHO05D003255 3.0e-12 75.1 47 74.5
SGA_v2.0_scaffold165G38266 Striga asiatica HOM05D000929 ORTHO05D003255 3.0e-12 75.1 47 76.6
Zm00001eb192060 Zea mays HOM05D000929 ORTHO05D003255 3.0e-12 75.1 47 74.5
Zm00001eb271590 Zea mays HOM05D000929 ORTHO05D003255 3.0e-12 75.1 47 74.5
Zm00001eb375520 Zea mays HOM05D000929 ORTHO05D003255 3.0e-12 75.1 47 74.5
AL1G37650 Arabidopsis lyrata HOM05D000929 ORTHO05D003255 4.0e-12 74.7 47 72.3
AT1G23900 Arabidopsis thaliana HOM05D000929 ORTHO05D003255 4.0e-12 74.7 47 72.3
CSS0042322 Camellia sinensis var. sinensis HOM05D000929 ORTHO05D003255 4.0e-12 74.7 47 76.6
Carub.0001s2339 Capsella rubella HOM05D000929 ORTHO05D003255 4.0e-12 74.7 47 72.3
Gohir.D02G163900 Gossypium hirsutum HOM05D000929 ORTHO05D003255 4.0e-12 74.7 47 74.5
Os06g0167100 Oryza sativa ssp. japonica HOM05D000929 ORTHO05D003255 4.0e-12 74.7 47 74.5
GSVIVG01020209001 Vitis vinifera HOM05D000929 ORTHO05D003255 4.0e-12 74.7 47 74.5
Os02g0805000 Oryza sativa ssp. japonica HOM05D000929 ORTHO05D003255 6.8e-12 73.9 47 72.3
PRCOL_00002053 Prasinoderma coloniale HOM05D000929 ORTHO05D003255 6.8e-12 73.9 53 71.7
QL03p061898 Quercus lobata HOM05D000929 ORTHO05D003255 6.8e-12 73.9 47 74.5
Cfa009113 Carpinus fangiana HOM05D000929 ORTHO05D003255 8.9e-12 73.6 47 74.5
CiPaw.05G147600 Carya illinoinensis HOM05D000929 ORTHO05D003255 8.9e-12 73.6 47 74.5
CiPaw.06G073700 Carya illinoinensis HOM05D000929 ORTHO05D003255 8.9e-12 73.6 47 74.5
Haze_12151 Corylus avellana HOM05D000929 ORTHO05D003255 8.9e-12 73.6 47 74.5
Sc04g0009010 Simmondsia chinensis HOM05D000929 ORTHO05D003255 8.9e-12 73.6 47 72.3
HanXRQChr12g0383371 Helianthus annuus HOM05D000929 ORTHO05D003255 1.2e-11 73.2 47 74.5
HanXRQChr17g0570221 Helianthus annuus HOM05D000929 ORTHO05D003255 1.2e-11 73.2 47 74.5
Lsat_1_v5_gn_4_7040 Lactuca sativa HOM05D000929 ORTHO05D003255 1.2e-11 73.2 47 74.5
Lsat_1_v5_gn_4_7061 Lactuca sativa HOM05D000929 ORTHO05D003255 1.2e-11 73.2 47 74.5
CAN.G205.10 Capsicum annuum HOM05D000929 ORTHO05D003255 2.0e-11 72.4 47 76.6
Nitab4.5_0000052g0340 Nicotiana tabacum HOM05D000929 ORTHO05D003255 2.0e-11 72.4 47 76.6
Nitab4.5_0008887g0020 Nicotiana tabacum HOM05D000929 ORTHO05D003255 2.0e-11 72.4 47 76.6
Peaxi162Scf00421g00122 Petunia axillaris HOM05D000929 ORTHO05D003255 2.0e-11 72.4 47 76.6
Solyc05g005780.3 Solanum lycopersicum HOM05D000929 ORTHO05D003255 2.0e-11 72.4 47 76.6
Sopen05g001780 Solanum pennellii HOM05D000929 ORTHO05D003255 2.0e-11 72.4 47 76.6
PGSC0003DMG400004116 Solanum tuberosum HOM05D000929 ORTHO05D003255 2.0e-11 72.4 47 76.6
Cfa025901 Carpinus fangiana HOM05D000929 ORTHO05D003255 3.4e-11 71.6 48 66.7
DCAR_031089 Daucus carota HOM05D000929 ORTHO05D003255 3.4e-11 71.6 70 51.4
SalBow8G4564 Salvia bowleyana HOM05D000929 ORTHO05D003255 3.4e-11 71.6 47 74.5
ECA234G1358 Erigeron canadensis HOM05D000929 ORTHO05D003255 4.4e-11 71.2 47 72.3
Gohir.A12G052100 Gossypium hirsutum HOM05D000929 ORTHO05D003255 5.7e-11 70.9 47 72.3
Gohir.D12G050500 Gossypium hirsutum HOM05D000929 ORTHO05D003255 5.7e-11 70.9 47 72.3
Gorai.008G053700 Gossypium raimondii HOM05D000929 ORTHO05D003255 5.7e-11 70.9 47 72.3
Cre16.g676650 Chlamydomonas reinhardtii HOM05D000929 ORTHO05D003255 9.8e-11 70.1 48 75.0
TWI18G0795 Tripterygium wilfordii HOM05D000929 ORTHO05D003255 1.3e-10 69.7 47 68.1
AT1G23935 Arabidopsis thaliana HOM05D000929 ORTHO05D038725 6.3e-10 67.4 47 68.1
Haze_26819 Corylus avellana HOM05D000929 ORTHO05D003255 8.3e-10 67.0 48 64.6
Aqoxy5G02907 Aquilegia oxysepala HOM05D000929 ORTHO05D003255 3.1e-09 65.1 47 70.2
Cpa.g.sc69.4 Carica papaya HOM05D000929 ORTHO05D003255 3.1e-09 65.1 62 54.8
Lsat_1_v5_gn_3_77260 Lactuca sativa HOM05D000929 ORTHO05D003255 4.1e-09 64.7 32 90.6
Lj3C1051G4 Lonicera japonica HOM05D000929 ORTHO05D003255 5.4e-09 64.3 45 73.3
Lsat_1_v5_gn_5_175420 Lactuca sativa HOM05D000929 ORTHO05D003255 1.2e-08 63.2 32 87.5
Phvul.003G053300 Phaseolus vulgaris HOM05D000929 ORTHO05D003255 1.6e-08 62.8 49 69.4
CSS0015451 Camellia sinensis var. sinensis HOM05D000929 ORTHO05D003255 2.7e-08 62.0 32 87.5
Lsat_1_v5_gn_5_109620 Lactuca sativa HOM05D000929 ORTHO05D003255 3.5e-08 61.6 32 84.4
CSS0016839 Camellia sinensis var. sinensis HOM05D000929 ORTHO05D003255 1.0e-07 60.1 32 84.4
Actinidia00022 Actinidia chinensis HOM05D000929 ORTHO05D003255 5.6e-06 54.3 43 67.4
Lalb_Chr22g0353161 Lupinus albus HOM05D003928 ORTHO05D007133 9.5e-06 53.5 48 58.3


User provided reference genes

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