Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c8_3850 Physcomitrium patens HOM05D016224 ORTHO05D023076 4.1e-276 954.1 497 100.0
Pp3c12_23140 Physcomitrium patens HOM05D016224 ORTHO05D023076 2.2e-107 393.7 488 51.4
Pp3c4_3630 Physcomitrium patens HOM05D016224 ORTHO05D023076 2.4e-58 230.7 434 38.9
Pp3c19_13560 Physcomitrium patens HOM05D016224 ORTHO05D023076 9.0e-29 132.5 446 30.5
Pp3c18_6640 Physcomitrium patens HOM05D016224 ORTHO05D023076 4.2e-26 123.6 434 27.4
Pp3c22_14520 Physcomitrium patens HOM05D016224 ORTHO05D023076 2.1e-22 111.3 277 31.8
AagrBONN_evm.TU.Sc2ySwM_228.2886 Anthoceros agrestis HOM05D000085 ORTHO05D001756 1.6e-14 85.1 155 32.3
Sed0020592 Sechium edule HOM05D000085 ORTHO05D006184 1.2e-12 79.0 155 29.0
AagrBONN_evm.TU.Sc2ySwM_117.1415 Anthoceros agrestis HOM05D016224 ORTHO05D010508 5.8e-12 76.6 211 27.5
Aqoxy6G00345 Aquilegia oxysepala HOM05D000085 ORTHO05D009791 5.8e-12 76.6 154 26.6
Pp3c10_2120 Physcomitrium patens HOM05D006074 ORTHO05D020966 5.8e-12 76.6 181 30.4
Lj6g0021794 Lotus japonicus HOM05D000085 ORTHO05D015977 2.2e-11 74.7 145 26.2
PGR044G1330 Punica granatum HOM05D000085 ORTHO05D006184 3.8e-11 73.9 152 28.9
AagrBONN_evm.TU.Sc2ySwM_117.1414 Anthoceros agrestis HOM05D016224 ORTHO05D010508 4.9e-11 73.6 197 28.9
VMungo0647G1792 Vigna mungo HOM05D000085 ORTHO05D006184 4.9e-11 73.6 147 25.2
Pp3c2_18540 Physcomitrium patens HOM05D006074 ORTHO05D020966 1.1e-10 72.4 156 29.5
Gorai.011G223900 Gossypium raimondii HOM05D000085 ORTHO05D006184 2.5e-10 71.2 150 25.3
TAR628G0721 Trochodendron aralioides HOM05D000085 ORTHO05D009791 4.2e-10 70.5 150 28.0
Pp3c9_19570 Physcomitrium patens HOM05D006074 ORTHO05D008728 5.5e-10 70.1 255 28.2
TWI79G0144 Tripterygium wilfordii HOM05D000085 ORTHO05D006184 9.3e-10 69.3 152 27.0
Potri.005G185500 Populus trichocarpa HOM05D000085 ORTHO05D009791 6.0e-09 66.6 161 25.5
Lj3g0006871 Lotus japonicus HOM05D000085 ORTHO05D006184 1.3e-08 65.5 149 23.5
SEGI_07503 Sequoiadendron giganteum HOM05D008363 ORTHO05D006184 1.8e-08 65.1 156 28.2
MBI03_g20848_MAGBIO Magnolia biondii HOM05D000085 ORTHO05D009791 2.3e-08 64.7 169 21.9
Pp3c13_19300 Physcomitrium patens HOM05D026724 ORTHO05D020966 2.3e-08 64.7 222 27.5
Duzib128G0691 Durio zibethinus HOM05D000085 ORTHO05D006184 3.9e-08 63.9 169 22.5
FAN06G0172 Fragaria x ananassa HOM05D000085 ORTHO05D006184 3.9e-08 63.9 156 25.0
FAN06G0213 Fragaria x ananassa HOM05D000085 ORTHO05D006184 3.9e-08 63.9 156 25.0
MD10G1008700 Malus domestica HOM05D000085 ORTHO05D009791 5.1e-08 63.5 152 27.0
FAN01G1090 Fragaria x ananassa HOM05D000085 ORTHO05D006184 6.7e-08 63.2 151 25.8
Haze_23539 Corylus avellana HOM05D004862 ORTHO05D005841 8.7e-08 62.8 163 23.3
FAN03G0175 Fragaria x ananassa HOM05D000085 ORTHO05D006184 8.7e-08 62.8 151 24.5
Gohir.D10G199700 Gossypium hirsutum HOM05D000085 ORTHO05D006184 8.7e-08 62.8 260 22.7
TPR.G16401 Trifolium pratense HOM05D000085 ORTHO05D006184 1.1e-07 62.4 208 21.2
Ca_24049_v3 Cicer arietinum L. HOM05D000085 ORTHO05D006184 1.5e-07 62.0 199 26.6
Pp3c17_19290 Physcomitrium patens HOM05D000085 ORTHO05D001756 1.5e-07 62.0 198 27.8
Aqoxy6G00346 Aquilegia oxysepala HOM05D000485 ORTHO05D009791 1.9e-07 61.6 254 23.6
CAN.G46.6 Capsicum annuum HOM05D000085 ORTHO05D009791 1.9e-07 61.6 160 25.0
Gohir.A10G191900 Gossypium hirsutum HOM05D000085 ORTHO05D006184 1.9e-07 61.6 161 23.6
Pp3c3_13770 Physcomitrium patens HOM05D026724 ORTHO05D020966 1.9e-07 61.6 197 30.5
Sed0010025 Sechium edule HOM05D000085 ORTHO05D009791 2.5e-07 61.2 227 22.9
Solyc04g063370.3 Solanum lycopersicum HOM05D000085 ORTHO05D009791 2.5e-07 61.2 123 25.2
Sopen04g026290 Solanum pennellii HOM05D000085 ORTHO05D009791 2.5e-07 61.2 123 25.2
TPR.G16382 Trifolium pratense HOM05D000085 ORTHO05D006184 2.5e-07 61.2 206 27.2
FAN27G0973 Fragaria x ananassa HOM05D000085 ORTHO05D009791 3.3e-07 60.8 165 24.8
Pp3c1_20750 Physcomitrium patens HOM05D006074 ORTHO05D020966 3.3e-07 60.8 228 27.2
Psat0s2703g0120 Pisum sativum HOM05D000085 ORTHO05D006184 3.3e-07 60.8 153 22.9
Cfa018397 Carpinus fangiana HOM05D000085 ORTHO05D009791 4.3e-07 60.5 155 21.3
FvH4_2g15260 Fragaria vesca HOM05D000085 ORTHO05D009791 4.3e-07 60.5 167 26.3
FAN13G1991 Fragaria x ananassa HOM05D008363 ORTHO05D010508 4.3e-07 60.5 151 25.8
FAN15G3404 Fragaria x ananassa HOM05D000085 ORTHO05D009791 4.3e-07 60.5 167 26.3
Glyma.04G126000 Glycine max HOM05D000085 ORTHO05D006184 4.3e-07 60.5 154 25.3
Phvul.005G013200 Phaseolus vulgaris HOM05D000085 ORTHO05D006184 5.7e-07 60.1 152 27.0
Pp3c1_20753 Physcomitrium patens HOM05D006074 ORTHO05D020966 5.7e-07 60.1 253 26.1
RcHm_v2.0_Chr6g0277981 Rosa chinensis HOM05D000085 ORTHO05D009791 5.7e-07 60.1 163 24.5
CSS0024542 Camellia sinensis var. sinensis HOM05D000085 ORTHO05D009791 7.4e-07 59.7 166 23.5
FAN08G0799 Fragaria x ananassa HOM05D008363 ORTHO05D010508 7.4e-07 59.7 151 25.8
FAN18G1001 Fragaria x ananassa HOM05D008363 ORTHO05D010508 7.4e-07 59.7 151 25.8
Prupe.8G012200 Prunus persica HOM05D000085 ORTHO05D009791 7.4e-07 59.7 166 22.3
Actinidia01698 Actinidia chinensis HOM05D000085 ORTHO05D006184 9.7e-07 59.3 171 21.6
Pp3c26_7470 Physcomitrium patens HOM05D026724 ORTHO05D020966 9.7e-07 59.3 149 28.2
FvH4_5g22141 Fragaria vesca HOM05D008363 ORTHO05D010508 1.3e-06 58.9 151 25.8
FAN04G2847 Fragaria x ananassa HOM05D008363 ORTHO05D010508 1.3e-06 58.9 151 25.8
Pp3c23_20410 Physcomitrium patens HOM05D006074 ORTHO05D026055 1.3e-06 58.9 167 22.2
Lj4A685T34 Lonicera japonica HOM05D000085 ORTHO05D009791 1.6e-06 58.5 150 23.3
Manes.02G172500 Manihot esculenta HOM05D000085 ORTHO05D009791 1.6e-06 58.5 162 22.8
Potri.001G035900 Populus trichocarpa HOM05D000085 ORTHO05D006184 1.6e-06 58.5 154 23.4
CsaV3_6G031170 Cucumis sativus L. HOM05D000085 ORTHO05D009791 2.2e-06 58.2 156 19.9
Glyma.06G312600 Glycine max HOM05D000085 ORTHO05D006184 2.2e-06 58.2 154 25.3
Prupe.8G012300 Prunus persica HOM05D008363 ORTHO05D009791 2.2e-06 58.2 150 22.0
Prupe.8G012500 Prunus persica HOM05D000085 ORTHO05D009791 2.2e-06 58.2 150 23.3
MD05G1010000 Malus domestica HOM05D000085 ORTHO05D009791 2.8e-06 57.8 163 24.5
Phvul.009G133000 Phaseolus vulgaris HOM05D000085 ORTHO05D009791 2.8e-06 57.8 125 27.2
Thecc.10G132100 Theobroma cacao HOM05D000085 ORTHO05D006184 2.8e-06 57.8 267 21.7
Medtr4g128180 Medicago truncatula HOM05D000085 ORTHO05D006184 3.7e-06 57.4 273 20.1
Actinidia03435 Actinidia chinensis HOM05D000085 ORTHO05D009791 6.3e-06 56.6 144 22.9
Actinidia29501 Actinidia chinensis HOM05D000085 ORTHO05D009791 6.3e-06 56.6 144 22.2
Ciclev10003429m.g Citrus clementina HOM05D000085 ORTHO05D009791 6.3e-06 56.6 266 24.4
MELO3C008431.2 Cucumis melo HOM05D000085 ORTHO05D009791 6.3e-06 56.6 156 19.2
Eucgr.F02764 Eucalyptus grandis HOM05D000085 ORTHO05D009791 8.2e-06 56.2 150 22.7


User provided reference genes

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