Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c8_2950 Physcomitrium patens HOM05D006598 ORTHO05D008132 1.5e-228 795.8 400 100.0
Pp3c4_6590 Physcomitrium patens HOM05D006598 ORTHO05D008132 5.5e-154 548.1 377 74.3
AagrBONN_evm.TU.Sc2ySwM_228.3129 Anthoceros agrestis HOM05D006598 ORTHO05D008132 1.3e-110 404.1 312 60.9
Pp3c12_23400 Physcomitrium patens HOM05D006598 ORTHO05D008132 2.4e-93 346.7 286 64.0
SEGI_39292 Sequoiadendron giganteum HOM05D006598 ORTHO05D008132 5.6e-90 335.5 307 55.4
MBI16_g31005_MAGBIO Magnolia biondii HOM05D006598 ORTHO05D008132 6.9e-88 328.6 308 54.9
Aa31LG9G12810 Aethionema arabicum HOM05D006598 ORTHO05D008132 2.9e-86 323.2 309 55.3
CSS0013932 Camellia sinensis var. sinensis HOM05D006598 ORTHO05D008132 1.4e-85 320.9 305 54.8
Carub.0008s0618 Capsella rubella HOM05D006598 ORTHO05D008132 1.9e-85 320.5 307 54.7
PSO675G7094 Papaver somniferum HOM05D006598 ORTHO05D008132 1.9e-85 320.5 309 55.0
Duzib116G0116 Durio zibethinus HOM05D006598 ORTHO05D008132 2.4e-85 320.1 336 50.6
BcaC06g31749 Brassica carinata HOM05D006598 ORTHO05D008132 4.2e-85 319.3 308 54.9
Ciclev10001322m.g Citrus clementina HOM05D006598 ORTHO05D008132 4.2e-85 319.3 309 51.5
Medtr3g111840 Medicago truncatula HOM05D006598 ORTHO05D008132 5.4e-85 318.9 309 53.4
TWI36G0987 Tripterygium wilfordii HOM05D006598 ORTHO05D008132 5.4e-85 318.9 309 52.4
Actinidia15332 Actinidia chinensis HOM05D006598 ORTHO05D008132 1.2e-84 317.8 309 52.8
AL8G18360 Arabidopsis lyrata HOM05D006598 ORTHO05D008132 1.2e-84 317.8 307 55.0
FAN20G2142 Fragaria x ananassa HOM05D006598 ORTHO05D008132 1.6e-84 317.4 310 53.2
TAR628G1208 Trochodendron aralioides HOM05D006598 ORTHO05D008132 1.6e-84 317.4 288 56.9
BcaC02g10811 Brassica carinata HOM05D006598 ORTHO05D008132 2.7e-84 316.6 308 54.5
C04p24910 Brassica napus HOM05D006598 ORTHO05D008132 2.7e-84 316.6 308 54.5
BolC4t23991H Brassica oleracea HOM05D006598 ORTHO05D008132 2.7e-84 316.6 308 54.5
Psat5g017160 Pisum sativum HOM05D006598 ORTHO05D008132 4.6e-84 315.8 311 53.4
TAR625G1490 Trochodendron aralioides HOM05D006598 ORTHO05D008132 4.6e-84 315.8 338 51.2
A06p48250 Brassica napus HOM05D006598 ORTHO05D008132 6.0e-84 315.5 307 54.7
BraA06t27693Z Brassica rapa HOM05D006598 ORTHO05D008132 6.0e-84 315.5 307 54.7
Thhalv10003240m.g Eutrema salsugineum HOM05D006598 ORTHO05D008132 6.0e-84 315.5 307 54.7
CARHR181720 Cardamine hirsuta HOM05D006598 ORTHO05D008132 7.9e-84 315.1 307 54.1
Potri.002G260300 Populus trichocarpa HOM05D006598 ORTHO05D008132 7.9e-84 315.1 306 53.9
THA.LOC104806941 Tarenaya hassleriana HOM05D006598 ORTHO05D008132 7.9e-84 315.1 342 48.5
Aqoxy6G01111 Aquilegia oxysepala HOM05D006598 ORTHO05D008132 1.3e-83 314.3 336 50.6
Glyma.04G032000 Glycine max HOM05D006598 ORTHO05D008132 1.3e-83 314.3 311 52.4
CDE04G2166 Ceratophyllum demersum HOM05D006598 ORTHO05D008132 1.7e-83 313.9 313 54.3
Lj1g0003551 Lotus japonicus HOM05D006598 ORTHO05D008132 1.7e-83 313.9 320 52.8
PSO541G3348 Papaver somniferum HOM05D006598 ORTHO05D008132 1.7e-83 313.9 309 53.7
Ca_15516_v3 Cicer arietinum L. HOM05D006598 ORTHO05D008132 2.3e-83 313.5 311 52.4
FvH4_2g39790 Fragaria vesca HOM05D006598 ORTHO05D008132 2.3e-83 313.5 309 52.8
FAN15G1256 Fragaria x ananassa HOM05D006598 ORTHO05D008132 2.3e-83 313.5 309 53.1
Glyma.06G032100 Glycine max HOM05D006598 ORTHO05D008132 2.3e-83 313.5 311 52.4
QL02p008626 Quercus lobata HOM05D006598 ORTHO05D008132 3.0e-83 313.2 309 52.1
arahy.Tifrunner.gnm1.ann1.9Y7K4V Arachis hypogaea HOM05D006598 ORTHO05D008132 3.9e-83 312.8 336 50.6
Dinv39426 Davidia involucrata HOM05D006598 ORTHO05D008132 5.1e-83 312.4 308 53.6
Rhsim06G0033600 Rhododendron simsii HOM05D006598 ORTHO05D008132 5.1e-83 312.4 307 53.1
CSS0023084 Camellia sinensis var. sinensis HOM05D006598 ORTHO05D008132 6.6e-83 312.0 309 52.4
Prupe.1G379200 Prunus persica HOM05D006598 ORTHO05D008132 8.7e-83 311.6 309 52.1
Sabra02G0198100 Salix brachista HOM05D006598 ORTHO05D008132 8.7e-83 311.6 306 53.3
AT5G42760 Arabidopsis thaliana HOM05D006598 ORTHO05D008132 1.1e-82 311.2 301 54.8
FAN27G1472 Fragaria x ananassa HOM05D006598 ORTHO05D008132 1.5e-82 310.8 309 52.1
SalBow7G0748 Salvia bowleyana HOM05D006598 ORTHO05D008132 1.5e-82 310.8 309 52.1
TPR.G12344 Trifolium pratense HOM05D006598 ORTHO05D008132 1.5e-82 310.8 311 52.1
Phvul.009G057800 Phaseolus vulgaris HOM05D006598 ORTHO05D008132 1.9e-82 310.5 311 51.4
Solyc04g080380.3 Solanum lycopersicum HOM05D006598 ORTHO05D008132 1.9e-82 310.5 305 50.5
COL.COLO4_26313 Corchorus olitorius HOM05D006598 ORTHO05D008132 2.5e-82 310.1 307 52.1
arahy.Tifrunner.gnm1.ann1.KF7WGB Arachis hypogaea HOM05D006598 ORTHO05D008132 3.3e-82 309.7 336 50.3
ECA232G3558 Erigeron canadensis HOM05D006598 ORTHO05D008132 3.3e-82 309.7 309 51.1
Sopen04g033970 Solanum pennellii HOM05D006598 ORTHO05D008132 3.3e-82 309.7 305 50.5
vmacro04528 Vaccinium macrocarpon HOM05D006598 ORTHO05D008132 3.3e-82 309.7 309 52.1
GSVIVG01009711001 Vitis vinifera HOM05D006598 ORTHO05D008132 3.3e-82 309.7 309 53.1
Actinidia38007 Actinidia chinensis HOM05D006598 ORTHO05D008132 4.3e-82 309.3 309 53.7
Cpa.g.sc36.79 Carica papaya HOM05D006598 ORTHO05D008132 4.3e-82 309.3 309 52.4
Manes.18G026900 Manihot esculenta HOM05D006598 ORTHO05D008132 4.3e-82 309.3 306 52.3
HPP92_018806 Vanilla planifolia HOM05D006598 ORTHO05D008132 4.3e-82 309.3 313 52.1
Rhsim07G0239600 Rhododendron simsii HOM05D006598 ORTHO05D008132 5.6e-82 308.9 309 51.5
vmacro21641 Vaccinium macrocarpon HOM05D006598 ORTHO05D008132 5.6e-82 308.9 307 52.1
Dinv36084 Davidia involucrata HOM05D006598 ORTHO05D008132 1.3e-81 307.8 309 52.4
MSTRG.25174 Avicennia marina HOM05D006598 ORTHO05D008132 2.1e-81 307.0 309 50.2
CAN.G1226.16 Capsicum annuum HOM05D006598 ORTHO05D008132 2.1e-81 307.0 326 48.5
PGSC0003DMG400003679 Solanum tuberosum HOM05D006598 ORTHO05D008132 2.1e-81 307.0 306 50.7
VMungo1309G1899 Vigna mungo HOM05D006598 ORTHO05D008132 2.1e-81 307.0 309 51.5
Sp2g07390 Schrenkiella parvula HOM05D006598 ORTHO05D008132 4.8e-81 305.8 307 53.4
Atru.chr13.478 Acer truncatum HOM05D006598 ORTHO05D008132 1.1e-80 304.7 309 50.5
CANSAT25G2965 Cannabis sativa HOM05D006598 ORTHO05D008132 1.1e-80 304.7 308 51.3
Cfa018154 Carpinus fangiana HOM05D006598 ORTHO05D008132 2.4e-80 303.5 308 51.0
Lj4A39T66 Lonicera japonica HOM05D006598 ORTHO05D008132 2.4e-80 303.5 309 52.4
Sc02g0006160 Simmondsia chinensis HOM05D006598 ORTHO05D008132 2.4e-80 303.5 306 51.0
Haze_17965 Corylus avellana HOM05D006598 ORTHO05D008132 3.1e-80 303.1 308 51.0
Migut.C00732 Erythranthe guttata HOM05D006598 ORTHO05D008132 3.1e-80 303.1 309 50.5
Nitab4.5_0010510g0030 Nicotiana tabacum HOM05D006598 ORTHO05D008132 4.0e-80 302.8 324 48.8
CiPaw.15G078300 Carya illinoinensis HOM05D006598 ORTHO05D008132 5.3e-80 302.4 309 51.5
Sed0027447 Sechium edule HOM05D006598 ORTHO05D008132 9.0e-80 301.6 303 53.1
ATR0810G155 Amborella trichopoda HOM05D006598 ORTHO05D008132 1.5e-79 300.8 308 52.6
Cc10_g02850 Coffea canephora HOM05D006598 ORTHO05D008132 4.5e-79 299.3 306 51.0
Nitab4.5_0006280g0060 Nicotiana tabacum HOM05D006598 ORTHO05D008132 4.5e-79 299.3 304 50.7
Eucgr.F01894 Eucalyptus grandis HOM05D006598 ORTHO05D008132 5.8e-79 298.9 308 51.9
SGA_v2.0_scaffold54G19518 Striga asiatica HOM05D006598 ORTHO05D008132 7.6e-79 298.5 309 51.5
PGR031G2630 Punica granatum HOM05D006598 ORTHO05D008132 9.9e-79 298.1 307 50.8
Lsat_1_v5_gn_4_119301 Lactuca sativa HOM05D006598 ORTHO05D008132 4.9e-78 295.8 304 50.3
AUR62035446 Chenopodium quinoa HOM05D006598 ORTHO05D008132 9.3e-77 291.6 311 51.4
Hund26575 Selenicereus undatus HOM05D006598 ORTHO05D008132 1.2e-76 291.2 309 50.5
Ah.11g043150 Amaranthus hybridus HOM05D006598 ORTHO05D008132 3.3e-74 283.1 309 49.5
Lalb_Chr11g0062331 Lupinus albus HOM05D006598 ORTHO05D008132 2.1e-73 280.4 310 49.7
CDE06G0448 Ceratophyllum demersum HOM05D006598 ORTHO05D008132 3.7e-73 279.6 273 54.9
Thecc.08G027000 Theobroma cacao HOM05D006598 ORTHO05D008132 3.1e-72 276.6 306 49.0
Os03g0775000 Oryza sativa ssp. japonica HOM05D006598 ORTHO05D008132 1.0e-67 261.5 307 47.6
Nitab4.5_0005730g0030 Nicotiana tabacum HOM05D006598 ORTHO05D008132 2.3e-67 260.4 306 47.1
Oeu049953.1 Olea europaea HOM05D006598 ORTHO05D008132 7.6e-63 245.4 307 44.0
Zm00001eb059150 Zea mays HOM05D006598 ORTHO05D008132 7.6e-63 245.4 314 44.6
HPP92_018704 Vanilla planifolia HOM05D006598 ORTHO05D008132 3.0e-59 233.4 240 52.1
TAR381G1379 Trochodendron aralioides HOM05D006598 ORTHO05D008132 4.4e-50 203.0 205 53.2
Nn5g29606 Nelumbo nucifera HOM05D006598 ORTHO05D008132 6.9e-48 195.7 213 51.6
Nitab4.5_0001091g0120 Nicotiana tabacum HOM05D006598 ORTHO05D008132 9.4e-45 185.3 200 48.0
HanXRQChr16g0508491 Helianthus annuus HOM05D006598 ORTHO05D008132 6.7e-43 179.1 183 48.1
unitig_46.g17936 Utricularia gibba HOM05D006598 ORTHO05D008132 1.2e-39 168.3 179 47.5
HPP92_018786 Vanilla planifolia HOM05D006598 ORTHO05D008132 1.6e-39 167.9 166 53.0
CSS0023478 Camellia sinensis var. sinensis HOM05D006598 ORTHO05D008132 2.2e-38 164.1 159 53.5
HPP92_018785 Vanilla planifolia HOM05D006598 ORTHO05D008132 1.4e-32 144.8 141 51.8
FAN20G3016 Fragaria x ananassa HOM05D006598 ORTHO05D008132 8.5e-30 135.6 127 55.1
AUR62039547 Chenopodium quinoa HOM05D006598 ORTHO05D008132 1.1e-29 135.2 197 43.1
Actinidia29823 Actinidia chinensis HOM05D006598 ORTHO05D008132 6.8e-27 125.9 156 45.5
Actinidia22543 Actinidia chinensis HOM05D006598 ORTHO05D008132 4.8e-25 119.8 107 53.3
TAR381G0844 Trochodendron aralioides HOM05D006598 ORTHO05D008132 4.5e-23 113.2 106 53.8
MCO09G151 Micromonas commoda HOM05D006598 ORTHO05D008132 8.3e-17 92.4 267 31.8
CBR_g22328 Chara braunii HOM05D006598 ORTHO05D008132 1.4e-16 91.7 174 36.8
MD15G1027400 Malus domestica HOM05D006598 ORTHO05D008132 2.4e-16 90.9 89 52.8
CSS0032599 Camellia sinensis var. sinensis HOM05D006598 ORTHO05D008132 1.6e-15 88.2 102 45.1
Actinidia29824 Actinidia chinensis HOM05D006598 ORTHO05D008132 9.5e-13 79.0 89 41.6
Nitab4.5_0000457g0120 Nicotiana tabacum HOM05D006598 ORTHO05D008132 5.2e-11 73.2 75 50.7
Cre17.g737650 Chlamydomonas reinhardtii HOM05D038115 ORTHO05D008132 3.7e-09 67.0 151 34.4
HanXRQChr09g0268921 Helianthus annuus HOM05D006598 ORTHO05D008132 3.0e-06 57.4 71 38.0


User provided reference genes

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