Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c8_2710 Physcomitrium patens HOM05D004773 ORTHO05D005943 1.9e-58 228.8 104 100.0
Pp3c12_11300 Physcomitrium patens HOM05D004773 ORTHO05D005943 7.4e-18 94.0 100 45.0
AagrBONN_evm.TU.Sc2ySwM_362.2127 Anthoceros agrestis HOM05D004773 ORTHO05D005943 1.4e-13 79.7 100 36.0
SMO367G0365 Selaginella moellendorffii HOM05D004773 ORTHO05D005943 2.7e-12 75.5 94 40.4
ATR0620G003 Amborella trichopoda HOM05D004773 ORTHO05D005943 1.4e-11 73.2 100 36.0
CiPaw.05G210200 Carya illinoinensis HOM05D004773 ORTHO05D005943 3.3e-10 68.6 94 37.2
QL09p005927 Quercus lobata HOM05D004773 ORTHO05D005943 5.7e-10 67.8 94 36.2
MBI04_g12483_MAGBIO Magnolia biondii HOM05D004773 ORTHO05D005943 7.4e-10 67.4 94 34.0
Os04g0577500 Oryza sativa ssp. japonica HOM05D004773 ORTHO05D005943 9.7e-10 67.0 94 36.2
HPP92_001431 Vanilla planifolia HOM05D004773 ORTHO05D005943 9.7e-10 67.0 100 36.0
Cpa.g.sc73.89 Carica papaya HOM05D004773 ORTHO05D005943 1.7e-09 66.2 94 34.0
Haze_00339 Corylus avellana HOM05D004773 ORTHO05D005943 2.2e-09 65.9 94 36.2
Thecc.05G229300 Theobroma cacao HOM05D004773 ORTHO05D005943 2.2e-09 65.9 94 35.1
vmacro15870 Vaccinium macrocarpon HOM05D004773 ORTHO05D005943 2.2e-09 65.9 94 34.0
BcaB08g36761 Brassica carinata HOM05D004773 ORTHO05D005943 3.7e-09 65.1 94 34.0
Duzib128G1941 Durio zibethinus HOM05D004773 ORTHO05D005943 3.7e-09 65.1 94 33.0
Cfa016123 Carpinus fangiana HOM05D004773 ORTHO05D005943 4.8e-09 64.7 94 35.1
MD15G1141100 Malus domestica HOM05D004773 ORTHO05D005943 4.8e-09 64.7 94 35.1
Peaxi162Scf00527g00065 Petunia axillaris HOM05D004773 ORTHO05D005943 4.8e-09 64.7 94 33.0
HPP92_001439 Vanilla planifolia HOM05D004773 ORTHO05D005943 4.8e-09 64.7 100 36.0
Aa31LG5G14030 Aethionema arabicum HOM05D004773 ORTHO05D005943 6.3e-09 64.3 94 34.0
TAR317G0002 Trochodendron aralioides HOM05D004773 ORTHO05D005943 8.2e-09 63.9 94 34.0
AUR62016916 Chenopodium quinoa HOM05D004773 ORTHO05D005943 1.1e-08 63.5 94 31.9
Hund21271 Selenicereus undatus HOM05D004773 ORTHO05D005943 1.1e-08 63.5 94 30.9
Glyma.16G151100 Glycine max HOM05D004773 ORTHO05D005943 1.4e-08 63.2 94 33.0
Rhsim02G0120400 Rhododendron simsii HOM05D000873 ORTHO05D002948 1.4e-08 63.2 94 34.0
Atru.chr2.1725 Acer truncatum HOM05D004773 ORTHO05D005943 1.8e-08 62.8 94 29.8
Gohir.D11G235500 Gossypium hirsutum HOM05D004773 ORTHO05D005943 1.8e-08 62.8 94 30.9
Gorai.007G248200 Gossypium raimondii HOM05D004773 ORTHO05D005943 1.8e-08 62.8 94 30.9
BcaC09g47749 Brassica carinata HOM05D004773 ORTHO05D005943 2.4e-08 62.4 94 31.9
Thhalv10014121m.g Eutrema salsugineum HOM05D004773 ORTHO05D005943 2.4e-08 62.4 94 31.9
Sc17g0006500 Simmondsia chinensis HOM05D004773 ORTHO05D005943 2.4e-08 62.4 94 34.0
AT3G03500 Arabidopsis thaliana HOM05D004773 ORTHO05D005943 3.1e-08 62.0 94 33.0
A06p26410 Brassica napus HOM05D004773 ORTHO05D005943 3.1e-08 62.0 94 31.9
BNapus_Darmor_BZH_scaffold_162p00180 Brassica napus HOM05D004773 ORTHO05D005943 3.1e-08 62.0 94 31.9
BNapus_Darmor_BZH_scaffold_78p00160 Brassica napus HOM05D004773 ORTHO05D005943 3.1e-08 62.0 94 31.9
BolC1t05828H Brassica oleracea HOM05D004773 ORTHO05D005943 3.1e-08 62.0 94 31.9
BraA01t04577Z Brassica rapa HOM05D004773 ORTHO05D005943 3.1e-08 62.0 94 31.9
Carub.0003s0264 Capsella rubella HOM05D004773 ORTHO05D005943 3.1e-08 62.0 94 31.9
Nitab4.5_0005399g0010 Nicotiana tabacum HOM05D004773 ORTHO05D005943 3.1e-08 62.0 94 31.9
Potri.013G073800 Populus trichocarpa HOM05D004773 ORTHO05D005943 4.1e-08 61.6 94 31.9
AL3G12620 Arabidopsis lyrata HOM05D004773 ORTHO05D005943 5.3e-08 61.2 94 33.0
AL6G28660 Arabidopsis lyrata HOM05D004773 ORTHO05D005943 5.3e-08 61.2 94 31.9
A10p21830 Brassica napus HOM05D004773 ORTHO05D008759 5.3e-08 61.2 98 29.6
Gohir.A11G222000 Gossypium hirsutum HOM05D004773 ORTHO05D005943 5.3e-08 61.2 94 30.9
C09p59580 Brassica napus HOM05D004773 ORTHO05D005943 6.9e-08 60.8 98 29.6
BolC9t58797H Brassica oleracea HOM05D004773 ORTHO05D005943 6.9e-08 60.8 98 29.6
Carub.0006s1581 Capsella rubella HOM05D004773 ORTHO05D005943 6.9e-08 60.8 94 30.9
CDE07G0301 Ceratophyllum demersum HOM05D004773 ORTHO05D005943 6.9e-08 60.8 94 30.9
Aa31LG11G12090 Aethionema arabicum HOM05D004773 ORTHO05D005943 9.1e-08 60.5 94 33.0
Aqoxy5G04203 Aquilegia oxysepala HOM05D004773 ORTHO05D005943 9.1e-08 60.5 95 32.6
AT5G17570 Arabidopsis thaliana HOM05D004773 ORTHO05D005943 9.1e-08 60.5 94 30.9
FAN09G0676 Fragaria x ananassa HOM05D004773 ORTHO05D005943 9.1e-08 60.5 99 33.3
Ca_04503_v3 Cicer arietinum L. HOM05D004773 ORTHO05D005943 1.2e-07 60.1 94 30.9
Gohir.D13G163600 Gossypium hirsutum HOM05D004773 ORTHO05D005943 1.2e-07 60.1 94 31.9
Nitab4.5_0003676g0020 Nicotiana tabacum HOM05D004773 ORTHO05D005943 1.2e-07 60.1 94 29.8
BcaC04g18778 Brassica carinata HOM05D004773 ORTHO05D005943 1.5e-07 59.7 94 30.9
FvH4_6g13930 Fragaria vesca HOM05D004773 ORTHO05D005943 1.5e-07 59.7 95 34.7
FvH4_6g14060 Fragaria vesca HOM05D004773 ORTHO05D005943 1.5e-07 59.7 95 34.7
FAN02G0119 Fragaria x ananassa HOM05D004773 ORTHO05D005943 1.5e-07 59.7 95 34.7
FAN05G1629 Fragaria x ananassa HOM05D004773 ORTHO05D005943 1.5e-07 59.7 95 34.7
FAN05G3354 Fragaria x ananassa HOM05D004773 ORTHO05D005943 1.5e-07 59.7 95 34.7
FAN09G4020 Fragaria x ananassa HOM05D004773 ORTHO05D005943 1.5e-07 59.7 95 34.7
FAN14G1019 Fragaria x ananassa HOM05D004773 ORTHO05D005943 1.5e-07 59.7 95 34.7
FAN14G4391 Fragaria x ananassa HOM05D004773 ORTHO05D005943 1.5e-07 59.7 95 34.7
Manes.08G158200 Manihot esculenta HOM05D004773 ORTHO05D005943 1.5e-07 59.7 94 30.9
Sp6g26650 Schrenkiella parvula HOM05D004773 ORTHO05D005943 1.5e-07 59.7 94 31.9
TWI32G1059 Tripterygium wilfordii HOM05D004773 ORTHO05D005943 2.0e-07 59.3 94 33.0
Gohir.A13G158600 Gossypium hirsutum HOM05D004773 ORTHO05D005943 3.4e-07 58.5 94 29.8
FAN09G3809 Fragaria x ananassa HOM05D004773 ORTHO05D005943 4.5e-07 58.2 95 34.7
THA.LOC104802900 Tarenaya hassleriana HOM05D004773 ORTHO05D005943 4.5e-07 58.2 94 31.9
Ciclev10032178m.g Citrus clementina HOM05D004773 ORTHO05D005943 1.0e-06 57.0 94 30.9
Duzib177G1208 Durio zibethinus HOM05D004773 ORTHO05D005943 1.0e-06 57.0 94 29.8
THA.LOC104802901 Tarenaya hassleriana HOM05D004773 ORTHO05D005943 1.0e-06 57.0 94 29.8
Thecc.05G229900 Theobroma cacao HOM05D004773 ORTHO05D005943 1.3e-06 56.6 100 28.0
CAN.G1181.18 Capsicum annuum HOM05D004773 ORTHO05D005943 1.7e-06 56.2 94 29.8
Actinidia11804 Actinidia chinensis HOM05D004773 ORTHO05D005943 2.2e-06 55.8 94 30.9
Gorai.013G199600 Gossypium raimondii HOM05D004773 ORTHO05D005943 2.9e-06 55.5 89 30.3
Sabra13G0063900 Salix brachista HOM05D004773 ORTHO05D008759 3.8e-06 55.1 94 31.9


User provided reference genes

Program Settings