Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c8_24380 Physcomitrium patens HOM05D007365 ORTHO05D009309 1.6e-115 419.5 219 100.0
Mapoly0009s0214 Marchantia polymorpha HOM05D007365 ORTHO05D009309 4.8e-27 125.6 85 67.1
CBR_g31098 Chara braunii HOM05D000019 ORTHO05D000048 2.7e-25 119.8 88 65.9
SEGI_39039 Sequoiadendron giganteum HOM05D007365 ORTHO05D009309 2.5e-23 113.2 104 51.0
TAR629G1651 Trochodendron aralioides HOM05D007365 ORTHO05D009309 7.2e-23 111.7 121 46.3
Cpa.g.sc1092.2 Carica papaya HOM05D007365 ORTHO05D009309 9.4e-23 111.3 106 50.9
unitig_37.g12181 Utricularia gibba HOM05D007365 ORTHO05D009309 9.4e-23 111.3 109 47.7
Nn1g07480 Nelumbo nucifera HOM05D007365 ORTHO05D009309 1.6e-22 110.5 120 46.7
Sabra06G0012500 Salix brachista HOM05D007365 ORTHO05D009309 2.7e-22 109.8 108 46.3
Sed0008513 Sechium edule HOM05D007365 ORTHO05D009309 2.7e-22 109.8 115 49.6
Thecc.06G237900 Theobroma cacao HOM05D007365 ORTHO05D009309 2.7e-22 109.8 108 50.9
GSVIVG01004669001 Vitis vinifera HOM05D007365 ORTHO05D009309 2.7e-22 109.8 115 49.6
Lj2P258T31 Lonicera japonica HOM05D007365 ORTHO05D009309 3.6e-22 109.4 121 50.4
VMungo1215G0355 Vigna mungo HOM05D007365 ORTHO05D009309 4.7e-22 109.0 104 48.1
CSS0050100 Camellia sinensis var. sinensis HOM05D007365 ORTHO05D009309 6.1e-22 108.6 147 40.1
Psat4g002120 Pisum sativum HOM05D007365 ORTHO05D009309 6.1e-22 108.6 109 47.7
ATR0624G051 Amborella trichopoda HOM05D007365 ORTHO05D009309 8.0e-22 108.2 95 53.7
GSVIVG01003482001 Vitis vinifera HOM05D007365 ORTHO05D009309 8.0e-22 108.2 115 48.7
Ca_21002_v3 Cicer arietinum L. HOM05D007365 ORTHO05D009309 1.0e-21 107.8 96 51.0
ClCG01G021340 Citrullus lanatus HOM05D007365 ORTHO05D009309 1.0e-21 107.8 107 49.5
TPR.G5966 Trifolium pratense HOM05D007365 ORTHO05D009309 1.0e-21 107.8 110 46.4
MELO3C007446.2 Cucumis melo HOM05D007365 ORTHO05D009309 1.4e-21 107.5 115 47.0
Eucgr.D01449 Eucalyptus grandis HOM05D007365 ORTHO05D009309 1.4e-21 107.5 110 47.3
TWI63G0678 Tripterygium wilfordii HOM05D007365 ORTHO05D009309 1.4e-21 107.5 114 47.4
Manes.08G070500 Manihot esculenta HOM05D007365 ORTHO05D009309 1.8e-21 107.1 114 44.7
CsaV3_6G048350 Cucumis sativus L. HOM05D007365 ORTHO05D009309 2.3e-21 106.7 114 47.4
AL7G38600 Arabidopsis lyrata HOM05D007365 ORTHO05D009309 3.0e-21 106.3 99 47.5
MSTRG.7141 Avicennia marina HOM05D007365 ORTHO05D009309 4.0e-21 105.9 97 51.5
CANSAT56G0830 Cannabis sativa HOM05D007365 ORTHO05D009309 4.0e-21 105.9 106 50.0
A03p49790 Brassica napus HOM05D007365 ORTHO05D009309 6.8e-21 105.1 98 46.9
BraA03t14074Z Brassica rapa HOM05D007365 ORTHO05D009309 6.8e-21 105.1 98 46.9
Ciclev10016816m.g Citrus clementina HOM05D007365 ORTHO05D009309 6.8e-21 105.1 113 41.6
Phvul.003G085500 Phaseolus vulgaris HOM05D007365 ORTHO05D009309 6.8e-21 105.1 98 49.0
THA.LOC104814483 Tarenaya hassleriana HOM05D007365 ORTHO05D009309 6.8e-21 105.1 116 44.0
TAR629G0160 Trochodendron aralioides HOM05D007365 ORTHO05D009309 6.8e-21 105.1 89 50.6
Cfa000056 Carpinus fangiana HOM05D007365 ORTHO05D009309 8.8e-21 104.8 106 48.1
Duzib235G0282 Durio zibethinus HOM05D007365 ORTHO05D009309 8.8e-21 104.8 93 50.5
Potri.006G017500 Populus trichocarpa HOM05D007365 ORTHO05D009309 8.8e-21 104.8 108 43.5
AT4G16410 Arabidopsis thaliana HOM05D007365 ORTHO05D009309 1.2e-20 104.4 99 45.5
C07p47850 Brassica napus HOM05D007365 ORTHO05D009309 1.2e-20 104.4 98 45.9
BolC7t45307H Brassica oleracea HOM05D007365 ORTHO05D009309 1.2e-20 104.4 98 45.9
Eucgr.D01445 Eucalyptus grandis HOM05D007365 ORTHO05D009309 1.2e-20 104.4 108 45.4
Eucgr.L00170 Eucalyptus grandis HOM05D007365 ORTHO05D009309 1.2e-20 104.4 108 45.4
QL05p068234 Quercus lobata HOM05D007365 ORTHO05D009309 1.2e-20 104.4 96 50.0
HPP92_007730 Vanilla planifolia HOM05D007365 ORTHO05D009309 1.2e-20 104.4 111 45.0
Lj4g0011771 Lotus japonicus HOM05D007365 ORTHO05D009309 1.5e-20 104.0 107 43.9
Carub.0007s2512 Capsella rubella HOM05D007365 ORTHO05D009309 2.0e-20 103.6 99 45.5
CARHR222780 Cardamine hirsuta HOM05D007365 ORTHO05D009309 2.0e-20 103.6 98 45.9
Lalb_Chr07g0176961 Lupinus albus HOM05D007365 ORTHO05D009309 2.6e-20 103.2 96 49.0
SGA_v2.0_scaffold7G03712 Striga asiatica HOM05D007365 ORTHO05D009309 2.6e-20 103.2 94 46.8
Ah.14g087440 Amaranthus hybridus HOM05D007365 ORTHO05D009309 3.4e-20 102.8 149 34.9
Oeu057031.1 Olea europaea HOM05D007365 ORTHO05D009309 3.4e-20 102.8 121 43.0
Sp7g14940 Schrenkiella parvula HOM05D007365 ORTHO05D009309 3.4e-20 102.8 98 44.9
Sc05g0009760 Simmondsia chinensis HOM05D007365 ORTHO05D009309 3.4e-20 102.8 114 43.0
Thhalv10026910m.g Eutrema salsugineum HOM05D007365 ORTHO05D009309 4.4e-20 102.4 98 44.9
CAN.G1156.8 Capsicum annuum HOM05D007365 ORTHO05D009309 5.7e-20 102.1 104 48.1
Gohir.A06G155600 Gossypium hirsutum HOM05D007365 ORTHO05D009309 7.5e-20 101.7 93 50.5
Gohir.D06G162000 Gossypium hirsutum HOM05D007365 ORTHO05D009309 7.5e-20 101.7 93 50.5
Gorai.010G189000 Gossypium raimondii HOM05D007365 ORTHO05D009309 7.5e-20 101.7 93 50.5
MD00G1057700 Malus domestica HOM05D007365 ORTHO05D009309 9.8e-20 101.3 98 46.9
Rhsim13G0142400 Rhododendron simsii HOM05D007365 ORTHO05D009309 9.8e-20 101.3 96 49.0
Haze_06998 Corylus avellana HOM05D007365 ORTHO05D009309 1.3e-19 100.9 221 33.9
DCAR_030849 Daucus carota HOM05D007365 ORTHO05D009309 1.3e-19 100.9 83 54.2
PSO017G7035 Papaver somniferum HOM05D007365 ORTHO05D009309 1.3e-19 100.9 117 41.9
HanXRQChr10g0285121 Helianthus annuus HOM05D007365 ORTHO05D009309 1.7e-19 100.5 106 48.1
Hma1.2p1_0657F.1_g196870 Hydrangea macrophylla HOM05D007365 ORTHO05D009309 1.7e-19 100.5 107 45.8
Hma1.2p1_1963F.1_g309285 Hydrangea macrophylla HOM05D007365 ORTHO05D009309 1.7e-19 100.5 107 45.8
Medtr4g133770 Medicago truncatula HOM05D007365 ORTHO05D009309 1.7e-19 100.5 111 46.8
PGR004G1025 Punica granatum HOM05D007365 ORTHO05D009309 1.7e-19 100.5 110 45.5
Solyc11g012640.1 Solanum lycopersicum HOM05D007365 ORTHO05D009309 1.7e-19 100.5 107 46.7
Sopen11g007370 Solanum pennellii HOM05D007365 ORTHO05D009309 1.7e-19 100.5 107 46.7
ECA248G3442 Erigeron canadensis HOM05D000864 ORTHO05D002353 2.8e-19 99.8 116 44.8
Prupe.4G006400 Prunus persica HOM05D007365 ORTHO05D009309 2.8e-19 99.8 105 43.8
Atru.chr1.2317 Acer truncatum HOM05D007365 ORTHO05D009309 3.7e-19 99.4 112 41.1
FAN25G1820 Fragaria x ananassa HOM05D007365 ORTHO05D009309 3.7e-19 99.4 107 46.7
PSO170G2578 Papaver somniferum HOM05D007365 ORTHO05D009309 3.7e-19 99.4 93 47.3
BraA01t02028Z Brassica rapa HOM05D007365 ORTHO05D009309 4.8e-19 99.0 94 51.1
FAN21G3283 Fragaria x ananassa HOM05D007365 ORTHO05D009309 4.8e-19 99.0 107 46.7
PGSC0003DMG400013294 Solanum tuberosum HOM05D007365 ORTHO05D009309 4.8e-19 99.0 107 45.8
Aqoxy1G04233 Aquilegia oxysepala HOM05D007365 ORTHO05D009309 6.3e-19 98.6 170 34.1
Glyma.17G007100 Glycine max HOM05D007365 ORTHO05D009309 6.3e-19 98.6 93 45.2
RcHm_v2.0_Chr5g0000731 Rosa chinensis HOM05D007365 ORTHO05D009309 6.3e-19 98.6 133 39.8
FvH4_3g00530 Fragaria vesca HOM05D007365 ORTHO05D009309 1.1e-18 97.8 107 45.8
Nitab4.5_0001668g0010 Nicotiana tabacum HOM05D007365 ORTHO05D009309 1.1e-18 97.8 108 44.4
EL10Ac8g20243 Beta vulgaris HOM05D007365 ORTHO05D009309 1.4e-18 97.4 109 41.3
Dinv15365 Davidia involucrata HOM05D007365 ORTHO05D009309 1.4e-18 97.4 94 46.8
Cc09_g00550 Coffea canephora HOM05D007365 ORTHO05D009309 4.1e-18 95.9 85 49.4
Migut.M01433 Erythranthe guttata HOM05D007365 ORTHO05D009309 4.1e-18 95.9 101 44.6
MBI19_g37436_MAGBIO Magnolia biondii HOM05D007365 ORTHO05D009309 4.1e-18 95.9 117 40.2
CDE02G4560 Ceratophyllum demersum HOM05D007365 ORTHO05D009309 1.2e-17 94.4 132 43.9
Zm00001eb280810 Zea mays HOM05D007365 ORTHO05D009309 1.0e-16 91.3 94 47.9
Zm00001eb380530 Zea mays HOM05D007365 ORTHO05D009309 8.5e-16 88.2 81 49.4
Glyma.07G267200 Glycine max HOM05D007365 ORTHO05D009309 1.5e-15 87.4 86 48.8
Hma1.2p1_0657F.1_g196860 Hydrangea macrophylla HOM05D007365 ORTHO05D009309 2.5e-15 86.7 97 45.4
Lsat_1_v5_gn_1_129921 Lactuca sativa HOM05D007365 ORTHO05D009309 3.2e-15 86.3 99 44.4
Peaxi162Scf00008g00111 Petunia axillaris HOM05D007365 ORTHO05D009309 6.1e-14 82.0 72 52.8
BcaNung00199 Brassica carinata HOM05D007365 ORTHO05D009309 8.0e-14 81.6 81 46.9
CiPaw.09G107000 Carya illinoinensis HOM05D007365 ORTHO05D009309 1.4e-13 80.9 70 55.7
Os07g0607200 Oryza sativa ssp. japonica HOM05D007365 ORTHO05D009309 3.0e-13 79.7 78 47.4
BcaC09g50340 Brassica carinata HOM05D007365 ORTHO05D009309 6.8e-13 78.6 85 43.5
C01p26480 Brassica napus HOM05D002647 ORTHO05D032546 8.8e-13 78.2 67 52.2
Aa31LG2G12470 Aethionema arabicum HOM05D002647 ORTHO05D000003 4.4e-12 75.9 90 44.4
MD10G1337000 Malus domestica HOM05D007365 ORTHO05D009309 2.8e-11 73.2 54 57.4
Actinidia02294 Actinidia chinensis HOM05D007365 ORTHO05D009309 3.3e-07 59.7 90 38.9
CsaV3_2G014000 Cucumis sativus L. HOM05D007365 ORTHO05D009309 8.0e-06 55.1 30 80.0


User provided reference genes

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