Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c8_21740 Physcomitrium patens HOM05D021506 ORTHO05D010788 0.0e+00 2536.1 1277 100.0
Mapoly0068s0004 Marchantia polymorpha HOM05D021506 ORTHO05D010788 0.0e+00 1238.8 1553 46.6
SMO011G0009 Selaginella moellendorffii HOM05D021506 ORTHO05D010788 2.4e-227 793.5 1316 40.0
CBR_g16833 Chara braunii HOM05D021506 ORTHO05D010788 2.4e-219 766.9 1784 31.6
PRCOL_00005320 Prasinoderma coloniale HOM05D021506 ORTHO05D010788 8.6e-84 316.6 448 38.8
Cre06.g300500 Chlamydomonas reinhardtii HOM05D021506 ORTHO05D010788 1.2e-48 199.9 620 26.5
Cre14.g617700 Chlamydomonas reinhardtii HOM05D008760 ORTHO05D010788 2.7e-37 162.2 366 29.8
Cre12.g509550 Chlamydomonas reinhardtii HOM05D008760 ORTHO05D010788 3.3e-35 155.2 384 30.5
Cre02.g143350 Chlamydomonas reinhardtii HOM05D008760 ORTHO05D010788 2.2e-34 152.5 398 28.6
Cre16.g664200 Chlamydomonas reinhardtii HOM05D008760 ORTHO05D010788 6.3e-34 151.0 363 31.4
Cre02.g119850 Chlamydomonas reinhardtii HOM05D008760 ORTHO05D010788 4.1e-33 148.3 377 30.8
Cre14.g617750 Chlamydomonas reinhardtii HOM05D008760 ORTHO05D010788 6.9e-33 147.5 351 29.3
PRCOL_00007251 Prasinoderma coloniale HOM05D008760 ORTHO05D010788 6.9e-33 147.5 363 27.5
Cre13.g590600 Chlamydomonas reinhardtii HOM05D008760 ORTHO05D010788 1.2e-32 146.7 348 31.0
Cre13.g564766 Chlamydomonas reinhardtii HOM05D008760 ORTHO05D010788 2.0e-32 146.0 363 30.0
Cre16.g664150 Chlamydomonas reinhardtii HOM05D008760 ORTHO05D010788 3.4e-32 145.2 365 31.5
Cre14.g617650 Chlamydomonas reinhardtii HOM05D008760 ORTHO05D010788 1.0e-31 143.7 373 28.7
Cre09.g389875 Chlamydomonas reinhardtii HOM05D008760 ORTHO05D010788 1.7e-31 142.9 369 30.1
Cre06.g289400 Chlamydomonas reinhardtii HOM05D008760 ORTHO05D010788 2.2e-31 142.5 357 30.3
Cre01.g015200 Chlamydomonas reinhardtii HOM05D008760 ORTHO05D010788 2.9e-31 142.1 366 29.2
Cre02.g143400 Chlamydomonas reinhardtii HOM05D008760 ORTHO05D010788 3.8e-31 141.7 363 29.2
Cre07.g342350 Chlamydomonas reinhardtii HOM05D008760 ORTHO05D010788 4.2e-30 138.3 358 26.3
Cre12.g499250 Chlamydomonas reinhardtii HOM05D008760 ORTHO05D010788 1.8e-28 132.9 363 28.7
Cre03.g204689 Chlamydomonas reinhardtii HOM05D008760 ORTHO05D010788 5.1e-28 131.3 363 28.1
Cre12.g499300 Chlamydomonas reinhardtii HOM05D008760 ORTHO05D010788 5.1e-28 131.3 363 28.4
MCO11G742 Micromonas commoda HOM05D008760 ORTHO05D010788 6.7e-28 131.0 403 29.0
Cre02.g109100 Chlamydomonas reinhardtii HOM05D008760 ORTHO05D010788 1.1e-27 130.2 403 28.3
Cre13.g567400 Chlamydomonas reinhardtii HOM05D008760 ORTHO05D010788 2.0e-27 129.4 363 27.0
Cre13.g603000 Chlamydomonas reinhardtii HOM05D008760 ORTHO05D010788 9.7e-27 127.1 376 24.5
Cre13.g605100 Chlamydomonas reinhardtii HOM05D008760 ORTHO05D010788 2.8e-26 125.6 375 23.5
Cre02.g114100 Chlamydomonas reinhardtii HOM05D008760 ORTHO05D010788 8.2e-26 124.0 419 27.4
PRCOL_00005603 Prasinoderma coloniale HOM05D008760 ORTHO05D010788 1.1e-25 123.6 372 27.2
MCO15G540 Micromonas commoda HOM05D008760 ORTHO05D010788 1.4e-25 123.2 438 26.5
Cre02.g141786 Chlamydomonas reinhardtii HOM05D008760 ORTHO05D010788 6.9e-25 120.9 400 27.5
PRCOL_00000919 Prasinoderma coloniale HOM05D008760 ORTHO05D010788 9.1e-25 120.6 378 27.8
Cre02.g143500 Chlamydomonas reinhardtii HOM05D008760 ORTHO05D010788 5.0e-23 114.8 444 26.1
Cre11.g468100 Chlamydomonas reinhardtii HOM05D008760 ORTHO05D010788 9.4e-22 110.5 419 25.1
Cre12.g557500 Chlamydomonas reinhardtii HOM05D008760 ORTHO05D010788 1.2e-21 110.2 168 35.1
Cre10.g454900 Chlamydomonas reinhardtii HOM05D008760 ORTHO05D010788 2.1e-21 109.4 392 24.7
PRCOL_00006923 Prasinoderma coloniale HOM05D008760 ORTHO05D010788 2.7e-21 109.0 373 26.5
Cre12.g559400 Chlamydomonas reinhardtii HOM05D008760 ORTHO05D010788 3.6e-21 108.6 427 24.6
MCO15G244 Micromonas commoda HOM05D008760 ORTHO05D268264 1.0e-20 107.1 383 27.2
Cre11.g467673 Chlamydomonas reinhardtii HOM05D008760 ORTHO05D010788 1.4e-20 106.7 385 26.2
Cfa022366 Carpinus fangiana HOM05D008760 ORTHO05D010788 1.4e-17 96.7 369 26.8
CBR_g8471 Chara braunii HOM05D000019 ORTHO05D000800 1.9e-14 86.3 287 23.7
CBR_g8468 Chara braunii HOM05D000019 ORTHO05D010788 2.2e-10 72.8 82 53.7
MCO04G515 Micromonas commoda HOM05D008760 ORTHO05D268499 4.5e-08 65.1 370 24.3
MCO12G157 Micromonas commoda HOM05D008760 ORTHO05D010788 5.9e-08 64.7 335 26.0
MCO11G620 Micromonas commoda HOM05D008760 ORTHO05D010788 3.8e-07 62.0 313 23.0


User provided reference genes

Program Settings