Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c8_20380 Physcomitrium patens HOM05D002235 ORTHO05D005799 4.4e-28 127.1 58 100.0
Mapoly0157s0015 Marchantia polymorpha HOM05D002235 ORTHO05D005799 1.9e-10 68.6 47 70.2
Mapoly0252s0007 Marchantia polymorpha HOM05D002235 ORTHO05D005799 1.9e-10 68.6 47 70.2
PSO210G5099 Papaver somniferum HOM05D002235 ORTHO05D005799 5.6e-07 57.0 47 55.3
CSS0009701 Camellia sinensis var. sinensis HOM05D002235 ORTHO05D005799 9.5e-07 56.2 47 55.3
Dinv36089 Davidia involucrata HOM05D000145 ORTHO05D000115 9.5e-07 56.2 47 55.3
ECA233G3712 Erigeron canadensis HOM05D002235 ORTHO05D005799 9.5e-07 56.2 47 55.3
ECA246G1214 Erigeron canadensis HOM05D002235 ORTHO05D005799 9.5e-07 56.2 47 55.3
Hma1.2p1_0224F.1_g094620 Hydrangea macrophylla HOM05D002235 ORTHO05D005799 9.5e-07 56.2 47 55.3
Lsat_1_v5_gn_8_1221 Lactuca sativa HOM05D002235 ORTHO05D005799 9.5e-07 56.2 47 55.3
Lj4C39T5 Lonicera japonica HOM05D002235 ORTHO05D005799 9.5e-07 56.2 47 55.3
MBI01_g12898_MAGBIO Magnolia biondii HOM05D002235 ORTHO05D005799 9.5e-07 56.2 47 55.3
Rhsim07G0240400 Rhododendron simsii HOM05D002235 ORTHO05D005799 9.5e-07 56.2 47 55.3
vmacro04531 Vaccinium macrocarpon HOM05D002235 ORTHO05D005799 9.5e-07 56.2 47 55.3
vmacro18282 Vaccinium macrocarpon HOM05D002235 ORTHO05D005799 9.5e-07 56.2 47 55.3
GSVIVG01018954001 Vitis vinifera HOM05D002235 ORTHO05D005799 9.5e-07 56.2 47 55.3
Dinv06515 Davidia involucrata HOM05D002235 ORTHO05D005799 1.2e-06 55.8 47 55.3
HanXRQChr13g0402731 Helianthus annuus HOM05D002235 ORTHO05D005799 1.2e-06 55.8 47 55.3
Lj2P905T21 Lonicera japonica HOM05D002235 ORTHO05D005799 1.2e-06 55.8 47 55.3
PSO017G6094 Papaver somniferum HOM05D002235 ORTHO05D005799 1.2e-06 55.8 47 53.2
PSO675G3787 Papaver somniferum HOM05D002235 ORTHO05D005799 1.2e-06 55.8 47 53.2
TAR381G0496 Trochodendron aralioides HOM05D002235 ORTHO05D005799 1.2e-06 55.8 47 55.3
TAR625G0888 Trochodendron aralioides HOM05D002235 ORTHO05D005799 1.2e-06 55.8 47 55.3
Aqoxy6G01121 Aquilegia oxysepala HOM05D002235 ORTHO05D005799 1.6e-06 55.5 47 53.2
Lsat_1_v5_gn_9_50621 Lactuca sativa HOM05D002235 ORTHO05D005799 2.1e-06 55.1 47 51.1
Nn5g29623 Nelumbo nucifera HOM05D002235 ORTHO05D005799 2.8e-06 54.7 47 53.2
Rhsim08G0117700 Rhododendron simsii HOM05D002235 ORTHO05D005799 2.8e-06 54.7 47 53.2
Sc02g0006030 Simmondsia chinensis HOM05D002235 ORTHO05D005799 3.6e-06 54.3 47 53.2
Lsat_1_v5_gn_1_45121 Lactuca sativa HOM05D002235 ORTHO05D005799 4.7e-06 53.9 47 51.1
HPP92_026358 Vanilla planifolia HOM05D002235 ORTHO05D005799 4.7e-06 53.9 47 51.1
Lsat_1_v5_gn_6_22200 Lactuca sativa HOM05D002235 ORTHO05D005799 6.2e-06 53.5 47 53.2
Sed0025608 Sechium edule HOM05D002235 ORTHO05D005799 6.2e-06 53.5 47 55.3
ATR0584G171 Amborella trichopoda HOM05D002235 ORTHO05D005799 8.1e-06 53.1 47 53.2
CAN.G358.94 Capsicum annuum HOM05D002235 ORTHO05D005799 8.1e-06 53.1 47 53.2
Cpa.g.sc903.1 Carica papaya HOM05D002235 ORTHO05D005799 8.1e-06 53.1 47 53.2
Nitab4.5_0001323g0110 Nicotiana tabacum HOM05D002235 ORTHO05D005799 8.1e-06 53.1 47 53.2
Nitab4.5_0002927g0020 Nicotiana tabacum HOM05D002235 ORTHO05D005799 8.1e-06 53.1 47 53.2
Solyc02g085280.1 Solanum lycopersicum HOM05D002235 ORTHO05D005799 8.1e-06 53.1 47 53.2
Sopen02g029970 Solanum pennellii HOM05D002235 ORTHO05D005799 8.1e-06 53.1 47 53.2
PGSC0003DMG400003504 Solanum tuberosum HOM05D002235 ORTHO05D005799 8.1e-06 53.1 47 53.2
TAR626G0470 Trochodendron aralioides HOM05D002235 ORTHO05D005799 8.1e-06 53.1 47 51.1


User provided reference genes

Program Settings