Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c8_2020 Physcomitrium patens HOM05D003016 ORTHO05D310070 5.2e-145 518.8 322 100.0
Pp3c18_4530 Physcomitrium patens HOM05D003016 ORTHO05D009718 3.6e-45 187.2 261 43.7
Pp3c21_15570 Physcomitrium patens HOM05D003016 ORTHO05D009718 1.4e-44 185.3 341 39.3
Pp3c17_20870 Physcomitrium patens HOM05D003016 ORTHO05D009718 1.8e-44 184.9 257 44.0
Pp3c17_20880 Physcomitrium patens HOM05D003016 ORTHO05D009718 1.8e-44 184.9 257 44.0
Pp3c13_15270 Physcomitrium patens HOM05D003016 ORTHO05D009718 8.8e-44 182.6 267 42.3
Pp3c13_21290 Physcomitrium patens HOM05D003016 ORTHO05D009718 1.2e-43 182.2 252 43.3
Pp3c8_2150 Physcomitrium patens HOM05D003016 ORTHO05D009718 4.8e-42 176.8 206 52.9
Pp3c13_15200 Physcomitrium patens HOM05D003016 ORTHO05D009718 5.3e-41 173.3 256 42.2
Pp3c21_6260 Physcomitrium patens HOM05D003016 ORTHO05D000239 5.3e-41 173.3 102 84.3
Pp3c14_1111 Physcomitrium patens HOM05D003016 ORTHO05D009718 4.5e-40 170.2 260 41.5
Pp3c13_19900 Physcomitrium patens HOM05D003016 ORTHO05D000239 7.7e-40 169.5 102 82.4
Pp3c20_21220 Physcomitrium patens HOM05D003016 ORTHO05D009718 2.2e-39 167.9 213 47.4
Pp3c21_3920 Physcomitrium patens HOM05D003016 ORTHO05D000239 4.2e-38 163.7 195 47.2
Pp3c17_21730 Physcomitrium patens HOM05D003016 ORTHO05D009718 2.0e-35 154.8 142 59.9
Pp3c17_21740 Physcomitrium patens HOM05D003016 ORTHO05D009718 2.0e-35 154.8 104 75.0
Pp3c13_22110 Physcomitrium patens HOM05D003016 ORTHO05D316010 7.5e-35 152.9 104 73.1
Pp3c20_21210 Physcomitrium patens HOM05D003016 ORTHO05D000239 7.5e-35 152.9 198 50.0
Pp3c11_3280 Physcomitrium patens HOM05D003016 ORTHO05D314275 1.3e-34 152.1 214 45.3
Pp3c13_21810 Physcomitrium patens HOM05D003016 ORTHO05D000239 2.4e-33 147.9 242 43.0
Pp3c16_23160 Physcomitrium patens HOM05D003016 ORTHO05D009718 1.3e-31 142.1 255 36.9
Pp3c13_2900 Physcomitrium patens HOM05D003016 ORTHO05D000239 3.8e-31 140.6 292 40.4
Pp3c13_2910 Physcomitrium patens HOM05D003016 ORTHO05D009718 3.8e-31 140.6 292 40.4
Pp3c13_21690 Physcomitrium patens HOM05D003016 ORTHO05D009718 3.2e-30 137.5 91 74.7
Pp3c13_3150 Physcomitrium patens HOM05D003016 ORTHO05D000239 1.6e-29 135.2 281 41.3
Pp3c14_6750 Physcomitrium patens HOM05D003016 ORTHO05D009718 3.6e-29 134.0 102 69.6
Pp3c13_2610 Physcomitrium patens HOM05D003016 ORTHO05D009718 6.1e-29 133.3 360 32.2
Pp3c21_18280 Physcomitrium patens HOM05D003016 ORTHO05D000239 1.5e-27 128.6 105 61.9
Pp3c14_13230 Physcomitrium patens HOM05D003016 ORTHO05D312549 2.0e-27 128.3 181 45.3
Pp3c25_5920 Physcomitrium patens HOM05D003016 ORTHO05D308189 9.8e-27 125.9 102 62.7
Pp3c15_16800 Physcomitrium patens HOM05D003016 ORTHO05D000239 2.4e-25 121.3 316 30.7
Pp3c2_12940 Physcomitrium patens HOM05D003016 ORTHO05D009718 7.8e-24 116.3 307 29.6
Pp3c6_8150 Physcomitrium patens HOM05D003016 ORTHO05D000239 5.0e-23 113.6 299 29.8
Pp3c17_8750 Physcomitrium patens HOM05D003016 ORTHO05D000239 3.6e-21 107.5 146 43.8
Pp3c7_21880 Physcomitrium patens HOM05D003016 ORTHO05D312108 8.0e-21 106.3 106 53.8
Pp3c2_12950 Physcomitrium patens HOM05D003016 ORTHO05D000239 4.0e-20 104.0 259 29.3
Pp3c18_2880 Physcomitrium patens HOM05D003016 ORTHO05D009718 6.8e-20 103.2 102 54.9
Pp3c11_13940 Physcomitrium patens HOM05D003016 ORTHO05D313315 1.2e-19 102.4 203 37.9
Pp3c6_5450 Physcomitrium patens HOM05D003016 ORTHO05D000239 2.6e-19 101.3 262 29.0
Pp3c6_11870 Physcomitrium patens HOM05D003016 ORTHO05D009718 4.4e-19 100.5 262 28.6
Pp3c9_10230 Physcomitrium patens HOM05D003016 ORTHO05D311455 2.2e-18 98.2 104 51.0
Pp3c11_21080 Physcomitrium patens HOM05D003016 ORTHO05D000239 1.1e-17 95.9 344 24.7
Pp3c3_21800 Physcomitrium patens HOM05D003016 ORTHO05D314314 2.4e-17 94.7 72 69.4
Pp3c18_2410 Physcomitrium patens HOM05D003016 ORTHO05D009718 1.2e-16 92.4 101 50.5
Pp3c21_14710 Physcomitrium patens HOM05D003016 ORTHO05D316218 1.6e-16 92.0 104 50.0
Pp3c15_960 Physcomitrium patens HOM05D003016 ORTHO05D000239 4.6e-16 90.5 102 49.0
Pp3c6_12460 Physcomitrium patens HOM05D003016 ORTHO05D310406 1.3e-15 89.0 171 40.9
Pp3c15_2320 Physcomitrium patens HOM05D003016 ORTHO05D000239 1.7e-15 88.6 105 47.6
Pp3c21_8750 Physcomitrium patens HOM05D003016 ORTHO05D009718 8.6e-15 86.3 266 28.9
Pp3c21_8760 Physcomitrium patens HOM05D003016 ORTHO05D000239 8.6e-15 86.3 266 28.9
Pp3c20_15960 Physcomitrium patens HOM05D003016 ORTHO05D009718 1.1e-14 85.9 105 46.7
Pp3c9_24950 Physcomitrium patens HOM05D003016 ORTHO05D318563 7.3e-14 83.2 101 53.5
Pp3c5_2300 Physcomitrium patens HOM05D003016 ORTHO05D309912 6.2e-13 80.1 98 43.9
Pp3c20_20760 Physcomitrium patens HOM05D003016 ORTHO05D000239 1.8e-12 78.6 280 25.4
Pp3c12_3810 Physcomitrium patens HOM05D003016 ORTHO05D313243 1.2e-11 75.9 221 30.8
Pp3c6_5930 Physcomitrium patens HOM05D003016 ORTHO05D009718 1.5e-11 75.5 105 43.8
Pp3c21_11770 Physcomitrium patens HOM05D003016 ORTHO05D314158 4.4e-11 73.9 149 38.3
Pp3c14_1440 Physcomitrium patens HOM05D003016 ORTHO05D000239 5.8e-11 73.6 66 56.1
Pp3c3_11530 Physcomitrium patens HOM05D003016 ORTHO05D318603 5.8e-11 73.6 194 32.0
Pp3c7_21000 Physcomitrium patens HOM05D003016 ORTHO05D317923 5.8e-11 73.6 105 43.8
Pp3c20_20770 Physcomitrium patens HOM05D003016 ORTHO05D009718 7.5e-11 73.2 91 42.9
Pp3c2_13120 Physcomitrium patens HOM05D003016 ORTHO05D000239 7.5e-11 73.2 105 41.9
Pp3c8_22280 Physcomitrium patens HOM05D003016 ORTHO05D314269 4.9e-10 70.5 54 64.8
Pp3c7_17410 Physcomitrium patens HOM05D003016 ORTHO05D309381 6.4e-10 70.1 84 46.4
Pp3c20_22019 Physcomitrium patens HOM05D003016 ORTHO05D318622 1.1e-09 69.3 105 39.0
Pp3c21_17690 Physcomitrium patens HOM05D003016 ORTHO05D311580 1.4e-09 68.9 101 43.6
Pp3c14_12500 Physcomitrium patens HOM05D003016 ORTHO05D315154 2.4e-09 68.2 39 76.9
Pp3c6_5610 Physcomitrium patens HOM05D003016 ORTHO05D009718 3.2e-09 67.8 105 41.0
Pp3c6_5920 Physcomitrium patens HOM05D003016 ORTHO05D009718 4.1e-09 67.4 105 42.9
Pp3c9_16400 Physcomitrium patens HOM05D003016 ORTHO05D000239 5.4e-09 67.0 253 29.2
Pp3c21_14700 Physcomitrium patens HOM05D003016 ORTHO05D318810 2.0e-08 65.1 61 57.4
Pp3c21_7380 Physcomitrium patens HOM05D003016 ORTHO05D315981 3.5e-08 64.3 36 86.1
Pp3c4_21050 Physcomitrium patens HOM05D003016 ORTHO05D318168 4.6e-08 63.9 66 57.6
QL03p016978 Quercus lobata HOM05D000005 ORTHO05D000012 1.0e-07 62.8 145 29.0
QL03p017352 Quercus lobata HOM05D000005 ORTHO05D000012 1.0e-07 62.8 146 32.9
Pp3c6_6000 Physcomitrium patens HOM05D003016 ORTHO05D318268 3.0e-07 61.2 54 57.4
Potri.006G282200 Populus trichocarpa HOM05D000005 ORTHO05D000012 3.0e-07 61.2 119 33.6
QL03p017232 Quercus lobata HOM05D000005 ORTHO05D000012 3.9e-07 60.8 145 29.0
Glyma.01G033300 Glycine max HOM05D000005 ORTHO05D000012 5.0e-07 60.5 144 25.7
Potri.011G008292 Populus trichocarpa HOM05D000005 ORTHO05D000012 5.0e-07 60.5 119 32.8
Hma1.2p1_0812F.1_g222290 Hydrangea macrophylla HOM05D000005 ORTHO05D000012 6.6e-07 60.1 101 35.6
Pp3c17_18950 Physcomitrium patens HOM05D003016 ORTHO05D312622 6.6e-07 60.1 39 71.8
Potri.006G270000 Populus trichocarpa HOM05D000005 ORTHO05D000012 6.6e-07 60.1 122 33.6
Pp3c18_4570 Physcomitrium patens HOM05D003016 ORTHO05D314024 8.6e-07 59.7 39 74.4
Potri.011G008228 Populus trichocarpa HOM05D000005 ORTHO05D000012 1.1e-06 59.3 119 31.9
Potri.011G013700 Populus trichocarpa HOM05D000005 ORTHO05D000012 1.1e-06 59.3 119 32.8
Potri.011G013900 Populus trichocarpa HOM05D000005 ORTHO05D000012 1.1e-06 59.3 119 32.8
Potri.006G282600 Populus trichocarpa HOM05D000005 ORTHO05D000012 1.5e-06 58.9 140 31.4
CAN.G1372.2 Capsicum annuum HOM05D000005 ORTHO05D000012 1.9e-06 58.5 102 32.4
Potri.011G008868 Populus trichocarpa HOM05D000005 ORTHO05D000012 1.9e-06 58.5 119 32.8
Potri.011G011600 Populus trichocarpa HOM05D000005 ORTHO05D000012 1.9e-06 58.5 122 34.4
Potri.011G013450 Populus trichocarpa HOM05D000005 ORTHO05D000012 1.9e-06 58.5 119 32.8
SalBow2G0098 Salvia bowleyana HOM05D000011 ORTHO05D000018 1.9e-06 58.5 141 29.8
PGSC0003DMG400018216 Solanum tuberosum HOM05D000005 ORTHO05D000012 1.9e-06 58.5 102 31.4
Ca_10440_v3 Cicer arietinum L. HOM05D000011 ORTHO05D002639 2.5e-06 58.2 138 26.8
Hma1.2p1_0812F.1_g222300 Hydrangea macrophylla HOM05D000005 ORTHO05D000012 2.5e-06 58.2 101 34.7
Prupe.8G185300 Prunus persica HOM05D000005 ORTHO05D000012 2.5e-06 58.2 101 30.7
arahy.Tifrunner.gnm1.ann1.P0A6GX Arachis hypogaea HOM05D000005 ORTHO05D000012 3.3e-06 57.8 139 31.7
Migut.D01749 Erythranthe guttata HOM05D000011 ORTHO05D000018 3.3e-06 57.8 153 28.1
Migut.D01773 Erythranthe guttata HOM05D000011 ORTHO05D000018 3.3e-06 57.8 127 30.7
Medtr8g011950 Medicago truncatula HOM05D000005 ORTHO05D000012 3.3e-06 57.8 108 33.3
QL03p017303 Quercus lobata HOM05D000005 ORTHO05D000012 3.3e-06 57.8 145 28.3
QL05p074258 Quercus lobata HOM05D000005 ORTHO05D000012 3.3e-06 57.8 116 29.3
CSS0026385 Camellia sinensis var. sinensis HOM05D000005 ORTHO05D000012 4.3e-06 57.4 120 30.0
Cpa.g.sc245.4 Carica papaya HOM05D000005 ORTHO05D000012 4.3e-06 57.4 103 31.1
Cc03_g14660 Coffea canephora HOM05D000011 ORTHO05D000018 4.3e-06 57.4 178 28.1
Eucgr.J01336 Eucalyptus grandis HOM05D000005 ORTHO05D011459 4.3e-06 57.4 101 30.7
Glyma.03G087600 Glycine max HOM05D000005 ORTHO05D000012 4.3e-06 57.4 105 33.3
PGR142G2883 Punica granatum HOM05D000005 ORTHO05D000012 4.3e-06 57.4 103 32.0
QL04p002490 Quercus lobata HOM05D000005 ORTHO05D000012 4.3e-06 57.4 179 24.0
QL04p002628 Quercus lobata HOM05D000005 ORTHO05D000012 4.3e-06 57.4 116 28.4
SalBow1G4835 Salvia bowleyana HOM05D000011 ORTHO05D000018 4.3e-06 57.4 145 31.0
SalBow1G6202 Salvia bowleyana HOM05D000011 ORTHO05D000018 4.3e-06 57.4 145 31.0
Eucgr.J01303 Eucalyptus grandis HOM05D000005 ORTHO05D000012 5.6e-06 57.0 137 29.2
FAN15G2039 Fragaria x ananassa HOM05D000005 ORTHO05D000012 5.6e-06 57.0 126 25.4
Medtr8g090310 Medicago truncatula HOM05D000005 ORTHO05D000012 5.6e-06 57.0 145 26.2
Pp3c14_8120 Physcomitrium patens HOM05D003016 ORTHO05D000239 5.6e-06 57.0 102 32.4
QL03p017067 Quercus lobata HOM05D000005 ORTHO05D000012 5.6e-06 57.0 146 31.5
Sopen01g045290 Solanum pennellii HOM05D000005 ORTHO05D000012 5.6e-06 57.0 102 31.4
CSS0049736 Camellia sinensis var. sinensis HOM05D000005 ORTHO05D000012 7.3e-06 56.6 120 30.0
Potri.006G283000 Populus trichocarpa HOM05D000005 ORTHO05D000012 7.3e-06 56.6 119 32.8
Potri.019G018800 Populus trichocarpa HOM05D000005 ORTHO05D000012 7.3e-06 56.6 101 30.7
QL04p002890 Quercus lobata HOM05D000005 ORTHO05D000012 7.3e-06 56.6 104 30.8
arahy.Tifrunner.gnm1.ann1.0DZS3V Arachis hypogaea HOM05D000005 ORTHO05D000012 9.5e-06 56.2 139 30.9
Migut.D01736 Erythranthe guttata HOM05D000011 ORTHO05D000018 9.5e-06 56.2 127 29.9
Migut.K01205 Erythranthe guttata HOM05D000011 ORTHO05D000018 9.5e-06 56.2 127 29.9
Eucgr.J01320 Eucalyptus grandis HOM05D000005 ORTHO05D000012 9.5e-06 56.2 101 31.7
FAN03G2198 Fragaria x ananassa HOM05D000005 ORTHO05D000012 9.5e-06 56.2 103 32.0
MD15G1376300 Malus domestica HOM05D000005 ORTHO05D000012 9.5e-06 56.2 141 28.4
Pp3c20_15850 Physcomitrium patens HOM05D003016 ORTHO05D000239 9.5e-06 56.2 54 51.9
SalBow1G1304 Salvia bowleyana HOM05D000011 ORTHO05D000018 9.5e-06 56.2 145 31.0
SalBow1G5485 Salvia bowleyana HOM05D000011 ORTHO05D000018 9.5e-06 56.2 145 30.3
SalBow1G8380 Salvia bowleyana HOM05D000011 ORTHO05D000018 9.5e-06 56.2 142 28.9


User provided reference genes

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