Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c8_18500 Physcomitrium patens HOM05D007225 ORTHO05D009062 1.6e-155 552.7 287 100.0
AagrBONN_evm.TU.Sc2ySwM_368.986 Anthoceros agrestis HOM05D007225 ORTHO05D009062 3.7e-43 179.5 192 46.9
Mapoly0095s0053 Marchantia polymorpha HOM05D007225 ORTHO05D009062 6.3e-35 152.1 266 33.8
Ciclev10002244m.g Citrus clementina HOM05D007225 ORTHO05D009062 1.6e-33 147.5 225 38.7
TAR625G0602 Trochodendron aralioides HOM05D007225 ORTHO05D009062 4.5e-33 146.0 245 36.3
TAR381G0670 Trochodendron aralioides HOM05D007225 ORTHO05D009062 5.9e-33 145.6 195 37.9
MBI06_g27455_MAGBIO Magnolia biondii HOM05D007225 ORTHO05D009062 1.7e-32 144.1 267 33.3
Dinv24394 Davidia involucrata HOM05D007225 ORTHO05D009062 5.0e-32 142.5 191 39.3
AagrBONN_evm.TU.Sc2ySwM_117.1984 Anthoceros agrestis HOM05D007225 ORTHO05D009062 7.2e-31 138.7 196 40.8
CiPaw.04G081200 Carya illinoinensis HOM05D007225 ORTHO05D009062 9.4e-31 138.3 210 40.5
Eucgr.I00189 Eucalyptus grandis HOM05D007225 ORTHO05D009062 1.2e-30 137.9 191 41.4
RcHm_v2.0_Chr4g0412751 Rosa chinensis HOM05D007225 ORTHO05D009062 1.2e-30 137.9 190 42.1
TPR.G37342 Trifolium pratense HOM05D007225 ORTHO05D009062 1.6e-30 137.5 180 40.6
Cc07_g18810 Coffea canephora HOM05D007225 ORTHO05D009062 2.7e-30 136.7 195 40.0
Aqoxy5G02304 Aquilegia oxysepala HOM05D007225 ORTHO05D009062 3.6e-30 136.3 200 40.5
QL10p043051 Quercus lobata HOM05D007225 ORTHO05D009062 6.1e-30 135.6 248 35.1
FAN12G1161 Fragaria x ananassa HOM05D007225 ORTHO05D009062 2.3e-29 133.7 192 42.2
FAN07G2982 Fragaria x ananassa HOM05D007225 ORTHO05D009062 3.0e-29 133.3 192 41.7
PGSC0003DMG400012541 Solanum tuberosum HOM05D007225 ORTHO05D009062 4.0e-29 132.9 211 37.0
Aqoxy6G00280 Aquilegia oxysepala HOM05D007225 ORTHO05D009062 5.2e-29 132.5 233 37.8
Ca_17629_v3 Cicer arietinum L. HOM05D007225 ORTHO05D009062 5.2e-29 132.5 180 40.6
PSO528G0250 Papaver somniferum HOM05D007225 ORTHO05D009062 5.2e-29 132.5 227 35.7
CsaV3_2G019450 Cucumis sativus L. HOM05D007225 ORTHO05D009062 6.8e-29 132.1 202 39.6
Solyc01g105570.4 Solanum lycopersicum HOM05D007225 ORTHO05D009062 6.8e-29 132.1 193 37.8
FvH4_4g13030 Fragaria vesca HOM05D007225 ORTHO05D009062 8.8e-29 131.7 192 41.7
Lj4g0008022 Lotus japonicus HOM05D007225 ORTHO05D009062 8.8e-29 131.7 180 38.3
PSO170G5625 Papaver somniferum HOM05D007225 ORTHO05D009062 8.8e-29 131.7 226 36.3
Medtr8g093850 Medicago truncatula HOM05D007225 ORTHO05D009062 1.5e-28 131.0 175 41.7
PGR119G1418 Punica granatum HOM05D007225 ORTHO05D009062 1.5e-28 131.0 208 36.1
Sopen01g048040 Solanum pennellii HOM05D007225 ORTHO05D009062 1.5e-28 131.0 193 36.8
Thecc.01G134800 Theobroma cacao HOM05D007225 ORTHO05D009062 1.5e-28 131.0 202 40.1
SMO146G0397 Selaginella moellendorffii HOM05D007225 ORTHO05D009062 2.6e-28 130.2 206 36.9
Migut.H00686 Erythranthe guttata HOM05D007225 ORTHO05D009062 4.4e-28 129.4 198 38.9
Psat7g045080 Pisum sativum HOM05D007225 ORTHO05D009062 4.4e-28 129.4 180 38.3
Hma1.2p1_0539F.1_g174530 Hydrangea macrophylla HOM05D007225 ORTHO05D009062 5.7e-28 129.0 189 37.0
Nn5g28498 Nelumbo nucifera HOM05D007225 ORTHO05D009062 5.7e-28 129.0 170 40.0
Atru.chr4.938 Acer truncatum HOM05D007225 ORTHO05D009062 7.5e-28 128.6 211 37.0
vmacro12787 Vaccinium macrocarpon HOM05D007225 ORTHO05D009062 1.7e-27 127.5 195 37.9
CANSAT01G2273 Cannabis sativa HOM05D007225 ORTHO05D009062 2.8e-27 126.7 222 36.0
Lalb_Chr13g0296631 Lupinus albus HOM05D007225 ORTHO05D009062 2.8e-27 126.7 183 36.6
CSS0045766 Camellia sinensis var. sinensis HOM05D007225 ORTHO05D009062 8.3e-27 125.2 195 35.9
Prupe.4G273000 Prunus persica HOM05D007225 ORTHO05D009062 8.3e-27 125.2 201 39.3
Cpa.g.sc42.174 Carica papaya HOM05D007225 ORTHO05D009062 1.8e-26 124.0 207 36.7
A06p30630 Brassica napus HOM05D007225 ORTHO05D009062 3.1e-26 123.2 189 40.7
Hund04436 Selenicereus undatus HOM05D007225 ORTHO05D009062 4.1e-26 122.9 226 35.0
Gorai.011G119000 Gossypium raimondii HOM05D007225 ORTHO05D009062 7.0e-26 122.1 189 39.7
Sed0013127 Sechium edule HOM05D007225 ORTHO05D009062 7.0e-26 122.1 267 33.3
BraA06t26013Z Brassica rapa HOM05D007225 ORTHO05D009062 9.1e-26 121.7 189 40.2
Sc07g0001760 Simmondsia chinensis HOM05D007225 ORTHO05D009062 1.2e-25 121.3 227 34.4
Oeu058297.1 Olea europaea HOM05D007225 ORTHO05D009062 2.0e-25 120.6 192 35.9
Nitab4.5_0000386g0080 Nicotiana tabacum HOM05D007225 ORTHO05D009062 5.9e-25 119.0 174 39.7
Gohir.D10G108600 Gossypium hirsutum HOM05D007225 ORTHO05D009062 7.7e-25 118.6 189 38.6
ClCG02G000390 Citrullus lanatus HOM05D007225 ORTHO05D009062 2.3e-24 117.1 202 37.1
COL.COLO4_35773 Corchorus olitorius HOM05D007225 ORTHO05D009062 2.3e-24 117.1 202 36.6
ATR0709G077 Amborella trichopoda HOM05D007225 ORTHO05D009062 2.9e-24 116.7 266 31.2
AT5G64010 Arabidopsis thaliana HOM05D007225 ORTHO05D009062 2.9e-24 116.7 189 38.1
BcaC01g02654 Brassica carinata HOM05D007225 ORTHO05D009062 6.6e-24 115.5 179 40.8
C03p62330 Brassica napus HOM05D007225 ORTHO05D009062 6.6e-24 115.5 179 40.8
BolC3t18495H Brassica oleracea HOM05D007225 ORTHO05D009062 6.6e-24 115.5 179 40.8
Potri.005G064800 Populus trichocarpa HOM05D007225 ORTHO05D009062 1.9e-23 114.0 188 37.2
Potri.005G064951 Populus trichocarpa HOM05D007225 ORTHO05D009062 1.9e-23 114.0 188 37.2
Sp2g27080 Schrenkiella parvula HOM05D007225 ORTHO05D009062 1.9e-23 114.0 192 37.0
AL8G41270 Arabidopsis lyrata HOM05D007225 ORTHO05D009062 3.3e-23 113.2 189 36.5
Gohir.A10G156900 Gossypium hirsutum HOM05D007225 ORTHO05D009062 4.2e-23 112.8 173 39.9
THA.LOC104818429 Tarenaya hassleriana HOM05D007225 ORTHO05D009062 4.2e-23 112.8 193 35.2
MD17G1201700 Malus domestica HOM05D007225 ORTHO05D009062 5.5e-23 112.5 194 35.6
Carub.0008s2479 Capsella rubella HOM05D007225 ORTHO05D009062 9.5e-23 111.7 167 39.5
MSTRG.23466 Avicennia marina HOM05D007225 ORTHO05D009062 1.6e-22 110.9 189 34.9
EL10Ac1g01390 Beta vulgaris HOM05D007225 ORTHO05D009062 1.6e-22 110.9 237 32.9
Lsat_1_v5_gn_5_68521 Lactuca sativa HOM05D007225 ORTHO05D009062 1.6e-22 110.9 187 33.7
Peaxi162Scf00172g00611 Petunia axillaris HOM05D007225 ORTHO05D009062 4.7e-22 109.4 149 40.3
AUR62017902 Chenopodium quinoa HOM05D007225 ORTHO05D009062 8.0e-22 108.6 201 33.3
AUR62043562 Chenopodium quinoa HOM05D007225 ORTHO05D009062 8.0e-22 108.6 201 33.3
Sabra05G0053800 Salix brachista HOM05D007225 ORTHO05D009062 1.0e-21 108.2 217 33.2
GSVIVG01022343001 Vitis vinifera HOM05D007225 ORTHO05D009062 1.4e-21 107.8 149 40.3
Thhalv10004850m.g Eutrema salsugineum HOM05D007225 ORTHO05D009062 1.8e-21 107.5 184 36.4
CARHR277930 Cardamine hirsuta HOM05D007225 ORTHO05D002208 4.0e-21 106.3 193 34.7
AUR62003589 Chenopodium quinoa HOM05D007225 ORTHO05D009062 1.2e-20 104.8 201 32.3
ECA233G3017 Erigeron canadensis HOM05D007225 ORTHO05D000131 1.5e-20 104.4 160 38.1
DCAR_014328 Daucus carota HOM05D007225 ORTHO05D009062 2.6e-20 103.6 193 35.2
DCAR_010250 Daucus carota HOM05D007225 ORTHO05D009062 1.7e-19 100.9 180 32.8
Manes.12G157300 Manihot esculenta HOM05D007225 ORTHO05D009062 8.3e-19 98.6 186 34.9
Glyma.05G192800 Glycine max HOM05D007225 ORTHO05D009062 1.8e-18 97.4 181 33.1
VMungo0251G1761 Vigna mungo HOM05D007225 ORTHO05D009062 3.2e-18 96.7 185 33.0
unitig_699.g19729 Utricularia gibba HOM05D007225 ORTHO05D009062 5.4e-18 95.9 190 33.7
Duzib187G1928 Durio zibethinus HOM05D007225 ORTHO05D009062 1.6e-17 94.4 190 35.3
SMO143G0295 Selaginella moellendorffii HOM05D021798 ORTHO05D018028 3.5e-17 93.2 218 32.1
HPP92_025180 Vanilla planifolia HOM05D007225 ORTHO05D009062 7.8e-17 92.0 230 28.7
Haze_25275 Corylus avellana HOM05D007225 ORTHO05D009062 1.0e-16 91.7 107 43.9
Os04g0693250 Oryza sativa ssp. japonica HOM05D007225 ORTHO05D009062 1.3e-16 91.3 228 27.6
Nn1g06303 Nelumbo nucifera HOM05D007225 ORTHO05D009062 2.3e-16 90.5 92 44.6
Phvul.002G273400 Phaseolus vulgaris HOM05D007225 ORTHO05D009062 6.6e-16 89.0 185 32.4
Rhsim10G0132500 Rhododendron simsii HOM05D007225 ORTHO05D009062 6.6e-16 89.0 135 39.3
Ah.02g121670 Amaranthus hybridus HOM05D007225 ORTHO05D009062 1.1e-15 88.2 167 32.9
Aa31LG1G17910 Aethionema arabicum HOM05D007225 ORTHO05D009062 3.3e-15 86.7 195 32.3
arahy.Tifrunner.gnm1.ann1.ST1FFJ Arachis hypogaea HOM05D007225 ORTHO05D009062 3.1e-13 80.1 102 37.3
RcHm_v2.0_Chr4g0412711 Rosa chinensis HOM05D007225 ORTHO05D009062 4.4e-12 76.3 115 38.3
HanXRQChr12g0380581 Helianthus annuus HOM05D007225 ORTHO05D009062 1.7e-11 74.3 129 31.0
Carub.0003s2889 Capsella rubella HOM05D007225 ORTHO05D009062 8.3e-11 72.0 89 43.8
SHI11479 Sapria himalayana HOM05D000043 ORTHO05D002577 4.6e-09 66.2 143 28.7
Glyma.08G000900 Glycine max HOM05D007225 ORTHO05D009062 6.0e-09 65.9 133 33.1
CBR_g23098 Chara braunii HOM05D007225 ORTHO05D009062 1.0e-08 65.1 242 26.4
SMO197G0114 Selaginella moellendorffii HOM05D021798 ORTHO05D018028 3.0e-08 63.5 180 27.8
MELO3C023228.2 Cucumis melo HOM05D007225 ORTHO05D009062 8.6e-08 62.0 102 37.3
SGA_v2.0_scaffold20G09018 Striga asiatica HOM05D007225 ORTHO05D009062 2.8e-06 57.0 121 32.2


User provided reference genes

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